Case | Control |
---|---|
78739 | 381455 |
Dysfunction of the urinary bladder. [HPO:probinson]
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr2:44066247 | Affx-20090007 | ABCG8 | G>C | 12129 | 51164 | 219.0 | 1.5e-49 | 1.168 |
chr2:44065090 | Affx-20089987 | ABCG5 | G>A | 11619 | 49473 | 183.4 | 8.719e-42 | 1.155 |
chr2:44073656 | rs41360247 | ABCG8 | T>C | 11753 | 50208 | 176.3 | 3.071e-40 | 1.151 |
chr15:48426484 | rs1426654 | SLC24A5 | A>G | 3980 | 23546 | 132.2 | 1.36e-30 | 0.8194 |
chr15:48392165 | rs1834640 | - | A>G | 4697 | 26927 | 109.4 | 1.354e-25 | 0.8457 |
chr6:170242949 | rs9396958 | - | T>C | 2273 | 13841 | 98.82 | 2.768e-23 | 0.7976 |
chr1:236085940 | rs12038310 | - | C>T | 2158 | 13118 | 92.39 | 7.112e-22 | 0.799 |
chr2:136407479 | rs1446585 | R3HDM1 | A>G | 43824 | 222574 | 85.81 | 1.985e-20 | 0.9451 |
chr5:54280007 | rs1508890 | ESM1 | C>A | 2669 | 15747 | 85.5 | 2.317e-20 | 0.8229 |
chr5:33951693 | rs16891982 | SLC45A2 | G>C | 10573 | 56485 | 81.05 | 2.198e-19 | 0.9061 |
chr23:128718936 | rs2362937 | OCRL | T>C | 2916 | 17035 | 79.24 | 5.509e-19 | 0.835 |
chr2:3313043 | rs73133173 | EIPR1 | A>C | 2064 | 12399 | 78.71 | 7.202e-19 | 0.8091 |
chr5:67954756 | rs255258 | - | T>C | 3594 | 20476 | 76.38 | 2.338e-18 | 0.8524 |
chr10:45243171 | rs10900107 | - | T>C | 3707 | 21038 | 75.02 | 4.658e-18 | 0.8556 |
chr15:93585096 | rs74245341 | RGMA | C>A | 3220 | 18443 | 73.34 | 1.091e-17 | 0.8479 |
chr5:33958959 | rs28777 | SLC45A2 | A>C | 8958 | 48034 | 73.25 | 1.145e-17 | 0.9037 |
chr2:44073881 | rs6544713 | ABCG8 | C>T | 50846 | 256397 | 72.76 | 1.463e-17 | 0.9514 |
chr2:211717706 | rs12995612 | - | C>G | 2398 | 14074 | 72.37 | 1.782e-17 | 0.8277 |
chr10:5790616 | rs2797492 | TASOR2 | A>G | 1624 | 9918 | 72.18 | 1.96e-17 | 0.796 |
chr19:42393286 | rs717225 | ARHGEF1 | A>G | 3270 | 18673 | 71.7 | 2.5e-17 | 0.8504 |
chr2:44066247 | Affx-20090007 | ABCG8 | G>C | 11694 | 48908 | 218.9 | 1.562e-49 | 1.171 |
chr2:44065090 | Affx-20089987 | ABCG5 | G>A | 11142 | 46966 | 186.7 | 1.707e-42 | 1.161 |
chr2:44073656 | rs41360247 | ABCG8 | T>C | 11162 | 47128 | 182.1 | 1.729e-41 | 1.158 |
chr2:44074431 | rs4245791 | ABCG8 | T>C | 49499 | 248842 | 83.74 | 5.65e-20 | 0.947 |
chr2:44073881 | rs6544713 | ABCG8 | C>T | 49025 | 246419 | 82.75 | 9.31e-20 | 0.9471 |
chr2:44081042 | rs4077440 | ABCG8 | C>T | 67470 | 334649 | 56.95 | 4.464e-14 | 0.9586 |
chr4:151199080 | rs2290846 | LRBA | G>A | 46222 | 217640 | 43.31 | 4.684e-11 | 1.041 |
chr4:151206319 | rs6817154 | LRBA | T>C | 50858 | 240200 | 39.82 | 2.789e-10 | 1.038 |
chr4:151207127 | rs3749574 | LRBA | C>T | 50852 | 240242 | 38.29 | 6.095e-10 | 1.037 |
chr5:110919542 | rs13359986 | - | A>G | 32323 | 161512 | 33.38 | 7.566e-09 | 0.9612 |
chr2:44043135 | rs10208987 | ABCG5 | T>G | 12665 | 58128 | 32.99 | 9.283e-09 | 1.06 |
chr2:136407479 | rs1446585 | R3HDM1 | A>G | 37186 | 185274 | 31.94 | 1.589e-08 | 0.9639 |
chr15:91588040 | rs12916539 | - | G>A | 15739 | 72738 | 31.85 | 1.665e-08 | 1.054 |
chr6:26325888 | rs2179152 | - | C>T | 59589 | 282897 | 31.84 | 1.673e-08 | 1.033 |
chr4:151148930 | rs28405622 | DCLK2 | C>T | 48812 | 231023 | 31.59 | 1.905e-08 | 1.034 |
chr6:26318903 | rs9467703 | - | G>A | 59474 | 282494 | 31.32 | 2.187e-08 | 1.033 |
chr17:36073320 | rs17138478 | HNF1B | C>A | 20870 | 97163 | 31.18 | 2.347e-08 | 1.047 |
chr13:51165494 | rs1239682 | DLEU7 | T>C | 73950 | 352450 | 30.76 | 2.918e-08 | 1.031 |
chr5:1322087 | rs401681 | CLPTM1L | C>T | 68037 | 335461 | 30.68 | 3.048e-08 | 0.9695 |
chr14:94838142 | rs112635299 | - | G>T | 3497 | 15289 | 30.58 | 3.206e-08 | 1.11 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr18:46453463 | rs4939827 | SMAD7 | T>C | 74928 | 11180 | 46.45 | 9.394e-12 | 1.098 |
chr2:44066247 | Affx-20090007 | ABCG8 | G>C | 11694 | 1552 | 41.23 | 1.354e-10 | 1.196 |
chr2:44065090 | Affx-20089987 | ABCG5 | G>A | 11142 | 1488 | 36.23 | 1.754e-09 | 1.187 |
chr2:44073656 | rs41360247 | ABCG8 | T>C | 11162 | 1502 | 33.34 | 7.735e-09 | 1.178 |
chr25:2676915 | rs311115 | - | G>C | 11428 | 2046 | 32.86 | 9.887e-09 | 0.8663 |
chr8:117630683 | rs16892766 | - | A>C | 12469 | 2217 | 32.34 | 1.297e-08 | 0.8718 |
chr2:44074431 | rs4245791 | ABCG8 | T>C | 49499 | 8166 | 26.8 | 2.253e-07 | 0.9273 |
chr2:44073881 | rs6544713 | ABCG8 | C>T | 49025 | 8075 | 25.13 | 5.372e-07 | 0.9293 |
chr8:117640315 | rs11986063 | - | C>T | 13790 | 2391 | 23.03 | 1.595e-06 | 0.8943 |
chr7:47750564 | rs56050637 | - | G>A | 19787 | 2841 | 21.73 | 3.138e-06 | 1.105 |
chr4:151148930 | rs28405622 | DCLK2 | C>T | 48812 | 7287 | 21.59 | 3.37e-06 | 1.072 |
chr18:48010269 | rs2969985 | - | T>C | 23601 | 3975 | 21.35 | 3.827e-06 | 0.9172 |
chr2:44081042 | rs4077440 | ABCG8 | C>T | 67470 | 10950 | 20.89 | 4.872e-06 | 0.9388 |
chr18:46459032 | rs4464148 | SMAD7 | T>C | 47445 | 7786 | 20.32 | 6.545e-06 | 0.9356 |
chr22:43896685 | rs28760421 | MPPED1 | A>G | 67743 | 10994 | 20.3 | 6.636e-06 | 0.9397 |
chr4:57733499 | rs2412761 | - | A>G | 27588 | 4615 | 20.29 | 6.653e-06 | 0.9237 |
chr6:17675246 | rs2228375 | NUP153 | T>C | 49633 | 7434 | 20.15 | 7.153e-06 | 1.069 |
chr18:46453754 | rs35352860 | SMAD7 | C>T | 41932 | 6241 | 19.93 | 8.013e-06 | 1.073 |
chr16:15154898 | rs3751877 | PDXDC1 | T>C | 16543 | 2365 | 19.57 | 9.715e-06 | 1.108 |
chr25:2679949 | rs311121 | - | G>T | 22210 | 3737 | 18.93 | 1.356e-05 | 0.9199 |