0000032

Case	Control
38843	421351

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds ratio
chr6:396321	rs12203592	IRF4	C>T	17813	183392	64.96	7.64e-16	1.074
chr1:236085940	rs12038310	-	C>T	1040	14236	51.64	6.659e-13	0.7931
chr2:3313043	rs73133173	EIPR1	A>C	983	13480	49.42	2.068e-12	0.792
chr5:33958959	rs28777	SLC45A2	A>C	4345	52647	48.33	3.601e-12	0.8934
chr5:33951693	rs16891982	SLC45A2	G>C	5156	61902	48.32	3.614e-12	0.9012
chr5:1315660	rs4975616	-	A>G	33620	377196	45.42	1.592e-11	0.9513
chr15:48426484	rs1426654	SLC24A5	A>G	2010	25516	44.91	2.063e-11	0.8547
chr5:1322087	rs401681	CLPTM1L	C>T	34911	390757	40.92	1.582e-10	0.9539
chr6:421281	rs62389423	-	G>A	14439	149597	40.35	2.119e-10	1.063
chr5:33951116	rs35397	SLC45A2	T>G	7077	83031	39.65	3.031e-10	0.9216
chr16:89101485	rs73258295	-	T>G	1991	24975	37.68	8.339e-10	0.8654
chr2:211717706	rs12995612	-	C>G	1169	15303	37.42	9.508e-10	0.8297
chr20:2315543	rs6132532	AL121899.2	A>G	3805	45729	35.65	2.358e-09	0.902
chr5:1342714	rs31489	CLPTM1L	C>A	32353	361945	34.64	3.965e-09	0.957
chr6:170242949	rs9396958	-	T>C	1150	14964	34.4	4.486e-09	0.8348
chr20:19214390	rs6136658	SLC24A3	G>A	961	12714	34.27	4.793e-09	0.8214
chr2:16797659	rs12615415	CYRIA	C>T	1505	19140	34.14	5.115e-09	0.8541
chr10:5790616	rs2797492	TASOR2	A>G	798	10744	33.86	5.915e-09	0.8072
chr5:33951826	rs35398	SLC45A2	G>T	1295	16687	33.85	5.949e-09	0.8445
chr6:93667780	rs9363020	-	G>A	836	11155	32.48	1.202e-08	0.8146
chr6:396321	rs12203592	IRF4	C>T	17598	181317	53.82	2.202e-13	1.068
chr5:1315660	rs4975616	-	A>G	31788	355438	45.73	1.355e-11	0.9497
chr5:1322087	rs401681	CLPTM1L	C>T	33176	370322	43.99	3.308e-11	0.951
chr5:1342714	rs31489	CLPTM1L	C>A	30880	344733	39.11	4.006e-10	0.9532
chr6:421281	rs62389423	-	G>A	14250	147615	33.78	6.186e-09	1.058
chr6:31334945	rs2844575	-	T>C	36614	388449	30.18	3.935e-08	1.042
chr25:2644302	rs1136470	-	C>T	10136	115678	26.84	2.209e-07	0.944
chr7:1877502	rs4719308	MAD1L1	T>G	30917	327173	26.52	2.603e-07	1.04
chr1:67774293	rs7544381	IL12RB2	C>T	25310	281723	25.81	3.767e-07	0.96
chr6:31483458	rs9267444	-	G>A	28344	315250	25.69	4.017e-07	0.9613
chr6:29477821	rs1233478	-	G>T	14783	166725	25.65	4.093e-07	0.9528
chr5:1320722	rs402710	CLPTM1L	C>T	26171	291258	24.97	5.816e-07	0.9611
chr6:28671343	rs6908726	-	C>G	9095	103872	24.91	6.021e-07	0.9436
chr6:28696063	rs9393929	-	C>A	8968	102447	24.83	6.266e-07	0.9433
chr7:1878453	rs1078112	MAD1L1	T>A	30915	327699	24.7	6.693e-07	1.039
chr6:29335154	rs9257793	OR5V1	T>C	9815	111730	24.6	7.055e-07	0.9456
chr6:31800868	rs2471980	-	G>C	24635	274487	24.36	8.008e-07	0.961
chr6:31610529	rs1077393	BAG6	A>G	37616	400271	24.19	8.738e-07	1.038
chr6:26455811	rs9295689	-	T>C	38365	408450	24.19	8.734e-07	1.038
chr6:31610686	rs1052486	BAG6	A>G	37572	399500	23.84	1.046e-06	1.037

Location

SNP

Gene

Ref>Alt

Alt in Case

Alt in Control

Chi-square

P-value

Odds ratio

chr6:396321

rs12203592

IRF4

C>T

17813

183392

64.96

7.64e-16

1.074

chr1:236085940

rs12038310

-

C>T

1040

14236

51.64

6.659e-13

0.7931

chr2:3313043

rs73133173

EIPR1

A>C

983

13480

49.42

2.068e-12

0.792

chr5:33958959

rs28777

SLC45A2

A>C

4345

52647

48.33

3.601e-12

0.8934

chr5:33951693

rs16891982

SLC45A2

G>C

5156

61902

48.32

3.614e-12

0.9012

chr5:1315660

rs4975616

-

A>G

33620

377196

45.42

1.592e-11

0.9513

chr15:48426484

rs1426654

SLC24A5

A>G

2010

25516

44.91

2.063e-11

0.8547

chr5:1322087

rs401681

CLPTM1L

C>T

34911

390757

40.92

1.582e-10

0.9539

chr6:421281

rs62389423

-

G>A

14439

149597

40.35

2.119e-10

1.063

chr5:33951116

rs35397

SLC45A2

T>G

7077

83031

39.65

3.031e-10

0.9216

chr16:89101485

rs73258295

-

T>G

1991

24975

37.68

8.339e-10

0.8654

chr2:211717706

rs12995612

-

C>G

1169

15303

37.42

9.508e-10

0.8297

chr20:2315543

rs6132532

AL121899.2

A>G

3805

45729

35.65

2.358e-09

0.902

chr5:1342714

rs31489

CLPTM1L

C>A

32353

361945

34.64

3.965e-09

0.957

chr6:170242949

rs9396958

-

T>C

1150

14964

34.4

4.486e-09

0.8348

chr20:19214390

rs6136658

SLC24A3

G>A

961

12714

34.27

4.793e-09

0.8214

chr2:16797659

rs12615415

CYRIA

C>T

1505

19140

34.14

5.115e-09

0.8541

chr10:5790616

rs2797492

TASOR2

A>G

798

10744

33.86

5.915e-09

0.8072

chr5:33951826

rs35398

SLC45A2

G>T

1295

16687

33.85

5.949e-09

0.8445

chr6:93667780

rs9363020

-

G>A

836

11155

32.48

1.202e-08

0.8146

chr6:396321

rs12203592

IRF4

C>T

17598

181317

53.82

2.202e-13

1.068

chr5:1315660

rs4975616

-

A>G

31788

355438

45.73

1.355e-11

0.9497

chr5:1322087

rs401681

CLPTM1L

C>T

33176

370322

43.99

3.308e-11

0.951

chr5:1342714

rs31489

CLPTM1L

C>A

30880

344733

39.11

4.006e-10

0.9532

chr6:421281

rs62389423

-

G>A

14250

147615

33.78

6.186e-09

1.058

chr6:31334945

rs2844575

-

T>C

36614

388449

30.18

3.935e-08

1.042

chr25:2644302

rs1136470

-

C>T

10136

115678

26.84

2.209e-07

0.944

chr7:1877502

rs4719308

MAD1L1

T>G

30917

327173

26.52

2.603e-07

1.04

chr1:67774293

rs7544381

IL12RB2

C>T

25310

281723

25.81

3.767e-07

0.96

chr6:31483458

rs9267444

-

G>A

28344

315250

25.69

4.017e-07

0.9613

chr6:29477821

rs1233478

-

G>T

14783

166725

25.65

4.093e-07

0.9528

chr5:1320722

rs402710

CLPTM1L

C>T

26171

291258

24.97

5.816e-07

0.9611

chr6:28671343

rs6908726

-

C>G

9095

103872

24.91

6.021e-07

0.9436

chr6:28696063

rs9393929

-

C>A

8968

102447

24.83

6.266e-07

0.9433

chr7:1878453

rs1078112

MAD1L1

T>A

30915

327699

24.7

6.693e-07

1.039

chr6:29335154

rs9257793

OR5V1

T>C

9815

111730

24.6

7.055e-07

0.9456

chr6:31800868

rs2471980

-

G>C

24635

274487

24.36

8.008e-07

0.961

chr6:31610529

rs1077393

BAG6

A>G

37616

400271

24.19

8.738e-07

1.038

chr6:26455811

rs9295689

-

T>C

38365

408450

24.19

8.734e-07

1.038

chr6:31610686

rs1052486

BAG6

A>G

37572

399500

23.84

1.046e-06

1.037

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds ratio
chr6:396321	rs12203592	IRF4	C>T	17598	22744	34.74	3.759e-09	1.07
chr5:23202075	rs75973626	-	T>C	1074	1174	27.55	1.531e-07	1.249
chr1:67774293	rs7544381	IL12RB2	C>T	25310	35611	26.21	3.057e-07	0.9496
chr11:114388840	rs4938113	-	A>G	1321	2139	25.29	4.929e-07	0.8374
chr9:27190655	rs1334811	TEK	G>A	2753	4207	23.09	1.549e-06	0.8869
chr11:114654354	rs11215201	-	T>C	1132	1844	22.99	1.628e-06	0.8334
chr7:1889622	rs10247428	MAD1L1	G>A	31271	43734	22.82	1.776e-06	0.9551
chr9:27184714	rs16911136	TEK	G>A	2778	4239	22.62	1.977e-06	0.8885
chr5:23182083	rs191658139	-	G>A	1023	1139	22.11	2.578e-06	1.226
chr6:31334945	rs2844575	-	T>C	36614	48670	21.9	2.877e-06	1.045
chr7:1877502	rs4719308	MAD1L1	T>G	30917	40929	21.1	4.353e-06	1.046
chr19:41847860	rs1800472	TGFB1	G>A	1572	2477	21.05	4.47e-06	0.8612
chr20:2454154	rs118139352	AL049650.2	A>G	1805	2814	20.85	4.96e-06	0.8699
chr6:421281	rs62389423	-	G>A	14250	18535	20.54	5.827e-06	1.057
chr7:1852269	rs4370428	-	C>T	27365	36208	20.34	6.496e-06	1.046
chr7:1877924	rs3889797	MAD1L1	A>C	32376	45197	20.13	7.252e-06	0.9579
chr5:165744369	rs1624242	-	A>G	22660	31881	20.11	7.325e-06	0.9546
chr2:156877774	rs6748811	-	A>C	5977	7551	20.08	7.424e-06	1.084
chr7:1878453	rs1078112	MAD1L1	T>A	30915	40985	20.07	7.447e-06	1.044
chr10:10428079	rs11256585	-	G>A	3299	4054	19.87	8.295e-06	1.113

ID	Name	Top Correlation
ICD: C445	Skin of trunk	7/20
ICD: L720	Epidermal cyst	3/20
ICD: N320	Bladder-neck obstruction	3/20

ID	Name	Top Correlation
ICD-10: A020	Salmonella gastro-enteritis	0/20
ICD-10: B24	Unspecified human immunodeficiency virus [HIV] disease	0/20
ICD-10: C210	Anus, unspecified	0/20
ICD-10: C459	Mesothelioma, unspecified	0/20
ICD-10: C629	Testis, unspecified	0/20
ICD-10: C675	Bladder neck	0/20
ICD-10: D045	Skin of trunk	0/20
ICD-10: D235	Skin of trunk	0/20
ICD-10: E291	Testicular hypofunction	0/20
ICD-10: F412	Mixed anxiety and depressive disorder	0/20
ICD-10: G958	Other specified diseases of spinal cord	0/20
ICD-10: I861	Scrotal varices	0/20
ICD-10: K413	Unilateral or unspecified femoral hernia, with obstruction, without gangrene	0/20
ICD-10: K419	Unilateral or unspecified femoral hernia, without obstruction or gangrene	0/20
ICD-10: L732	Hidradenitis suppurativa	0/20
ICD-10: L900	Lichen sclerosus et atrophicus	0/20
ICD-10: N210	Calculus in bladder	0/20
ICD-10: N300	Acute cystitis	0/20
ICD-10: N303	Trigonitis	0/20
ICD-10: N321	Vesicointestinal fistula	0/20
ICD-10: N329	Bladder disorder, unspecified	0/20
ICD-10: N342	Other urethritis	0/20
ICD-10: N358	Other urethral stricture	0/20
ICD-10: N359	Urethral stricture, unspecified	0/20
ICD-10: N360	Urethral fistula	0/20
ICD-10: N362	Urethral caruncle	0/20
ICD-10: N368	Other specified disorders of urethra	0/20
ICD-10: N399	Disorder of urinary system, unspecified	0/20
ICD-10: N410	Acute prostatitis	0/20
ICD-10: N419	Inflammatory disease of prostate, unspecified	0/20
ICD-10: N420	Calculus of prostate	0/20
ICD-10: N428	Other specified disorders of prostate	0/20
ICD-10: N433	Hydrocele, unspecified	0/20
ICD-10: N459	Orchitis, epididymitis and epididymo-orchitis without abscess	0/20
ICD-10: N47	Redundant prepuce, phimosis and paraphimosis	0/20
ICD-10: N480	Leukoplakia of penis	0/20
ICD-10: N481	Balanoposthitis	0/20
ICD-10: N482	Other inflammatory disorders of penis	0/20
ICD-10: N484	Impotence of organic origin	0/20
ICD-10: N486	Balanitis xerotica obliterans	0/20
ICD-10: N488	Other specified disorders of penis	0/20
ICD-10: N489	Disorder of penis, unspecified	0/20
ICD-10: N492	Inflammatory disorders of scrotum	0/20
ICD-10: N500	Atrophy of testis	0/20
ICD-10: N600	Solitary cyst of breast	0/20
ICD-10: N649	Disorder of breast, unspecified	0/20
ICD-10: N72	Inflammatory disease of cervix uteri	0/20
ICD-10: N750	Cyst of Bartholin's gland	0/20
ICD-10: N751	Abscess of Bartholin's gland	0/20
ICD-10: N762	Acute vulvitis	0/20
ICD-10: N831	Corpus luteum cyst	0/20
ICD-10: N904	Leukoplakia of vulva	0/20
ICD-10: N924	Excessive bleeding in the premenopausal period	0/20
ICD-10: N990	Postprocedural renal failure	0/20
ICD-10: O410	Oligohydramnios	0/20
ICD-10: Q668	Other congenital deformities of feet	0/20
ICD-10: Q892	Congenital malformations of other endocrine glands	0/20
ICD-10: R208	Other and unspecified disturbances of skin sensation	0/20
ICD-10: R391	Other difficulties with micturition	0/20
ICD-10: R452	Unhappiness	0/20
ICD-10: R521	Chronic intractable pain	0/20
ICD-10: T68	Hypothermia	0/20

Abnormality of male external genitalia

0000032

Normal Case/Contol ^ⓘ

Sibling Case/Control ^ⓘ

Links

Statistics

Phenotype Definition

Top SNP Information

Associated Diseases ^ⓘ

Abnormality of male external genitalia

0000032

Normal Case/Contol ⓘ

Sibling Case/Control ⓘ

Links

Statistics

Phenotype Definition

Top SNP Information Show Normal Table Show Sibling SNP

Associated Diseases ⓘ Shared SNP diseases No shared SNP diseases

Normal Case/Contol ^ⓘ

Sibling Case/Control ^ⓘ

Top SNP Information

Associated Diseases ^ⓘ