0000035

Case	Control
6506	453688

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds ratio
chr25:2692710	rs2259750	-	A>G	2810	180061	25.49	4.438e-07	1.114
chr14:73733188	rs78932134	PAPLN	C>G	1077	64940	24.03	9.507e-07	1.17
chr8:106293432	rs117609532	ZFPM2	A>C	342	18402	22.95	1.666e-06	1.302
chr23:68134311	rs73543624	-	G>A	363	23208	21.97	2.768e-06	1.287
chr6:30832114	rs116812635	-	C>T	659	38361	21.91	2.854e-06	1.207
chr1:175425181	rs860905	TNR	G>A	342	18520	21.86	2.931e-06	1.294
chr21:19462686	rs75502184	CHODL	G>T	375	32982	20.91	4.818e-06	0.7865
chr9:14737506	rs10961689	FREM1	G>T	3471	258741	20.72	5.317e-06	0.9138
chr10:68300707	rs1486525	CTNNA3	A>G	1330	104298	20.49	6.002e-06	0.8769
chr6:30800326	rs3130648	-	T>C	2934	189782	20.15	7.157e-06	1.099
chr1:232563249	rs12032703	SIPA1L2	T>C	137	13967	20.14	7.191e-06	0.6805
chr6:30822413	rs3095345	-	T>C	2597	167261	19.84	8.415e-06	1.103
chr7:95113420	rs3757704	ASB4	G>T	465	39747	19.84	8.404e-06	0.8098
chr8:87207401	rs17605712	-	A>G	611	35627	19.79	8.662e-06	1.204
chr2:233486120	rs6717991	EFHD1	C>T	259	13696	19.75	8.83e-06	1.324
chr6:30924614	rs114089979	-	C>T	677	39901	19.51	1.002e-05	1.192
chr5:31552619	rs11743794	C5orf22	G>A	2842	183914	19.1	1.239e-05	1.097
chr15:70462952	rs16954189	-	G>A	608	35579	19.0	1.308e-05	1.2
chr9:14737616	rs10961690	FREM1	G>A	3631	269043	18.94	1.35e-05	0.9188
chr1:219676042	rs2791553	-	G>A	5328	388861	18.86	1.409e-05	0.9264
chr8:106293432	rs117609532	ZFPM2	A>C	336	18038	23.05	1.581e-06	1.306
chr14:73733188	rs78932134	PAPLN	C>G	1045	63182	22.71	1.885e-06	1.167
chr9:14737506	rs10961689	FREM1	G>T	3249	243619	22.6	1.991e-06	0.9074
chr25:2692710	rs2259750	-	A>G	2580	166022	21.33	3.857e-06	1.108
chr9:14737616	rs10961690	FREM1	G>A	3403	253797	21.32	3.885e-06	0.9114
chr21:19462686	rs75502184	CHODL	G>T	370	32557	20.66	5.485e-06	0.7862
chr8:77797379	rs12542269	-	A>G	3101	231753	19.62	9.469e-06	0.9123
chr2:233486120	rs6717991	EFHD1	C>T	253	13358	19.59	9.614e-06	1.327
chr12:98342140	rs11109288	-	G>A	228	21246	19.37	1.077e-05	0.7448
chr7:95113420	rs3757704	ASB4	G>T	446	38055	18.65	1.573e-05	0.8115
chr5:31552619	rs11743794	C5orf22	G>A	2669	172542	18.56	1.642e-05	1.099
chr20:42989267	rs4812829	HNF4A	G>A	1895	144676	18.55	1.652e-05	0.8979
chr11:28062429	rs16917685	KIF18A	T>G	168	16281	18.33	1.853e-05	0.717
chr6:30832114	rs116812635	-	C>T	630	37133	18.24	1.947e-05	1.192
chr4:104734438	rs72489515	-	T>C	771	46222	18.11	2.086e-05	1.173
chr20:42915910	rs2144904	-	G>A	2434	183521	17.74	2.529e-05	0.9091
chr9:78050363	rs558354	-	T>C	2204	141333	17.69	2.602e-05	1.104
chr6:29944004	rs2245961	-	A>C	4998	332393	17.57	2.776e-05	1.079
chr10:12338120	rs7099923	-	A>C	589	34612	17.54	2.809e-05	1.195
chr19:35822884	rs117849177	CD22	C>T	158	15311	17.42	3.004e-05	0.7159

Location

SNP

Gene

Ref>Alt

Alt in Case

Alt in Control

Chi-square

P-value

Odds ratio

chr25:2692710

rs2259750

-

A>G

2810

180061

25.49

4.438e-07

1.114

chr14:73733188

rs78932134

PAPLN

C>G

1077

64940

24.03

9.507e-07

1.17

chr8:106293432

rs117609532

ZFPM2

A>C

342

18402

22.95

1.666e-06

1.302

chr23:68134311

rs73543624

-

G>A

363

23208

21.97

2.768e-06

1.287

chr6:30832114

rs116812635

-

C>T

659

38361

21.91

2.854e-06

1.207

chr1:175425181

rs860905

TNR

G>A

342

18520

21.86

2.931e-06

1.294

chr21:19462686

rs75502184

CHODL

G>T

375

32982

20.91

4.818e-06

0.7865

chr9:14737506

rs10961689

FREM1

G>T

3471

258741

20.72

5.317e-06

0.9138

chr10:68300707

rs1486525

CTNNA3

A>G

1330

104298

20.49

6.002e-06

0.8769

chr6:30800326

rs3130648

-

T>C

2934

189782

20.15

7.157e-06

1.099

chr1:232563249

rs12032703

SIPA1L2

T>C

137

13967

20.14

7.191e-06

0.6805

chr6:30822413

rs3095345

-

T>C

2597

167261

19.84

8.415e-06

1.103

chr7:95113420

rs3757704

ASB4

G>T

465

39747

19.84

8.404e-06

0.8098

chr8:87207401

rs17605712

-

A>G

611

35627

19.79

8.662e-06

1.204

chr2:233486120

rs6717991

EFHD1

C>T

259

13696

19.75

8.83e-06

1.324

chr6:30924614

rs114089979

-

C>T

677

39901

19.51

1.002e-05

1.192

chr5:31552619

rs11743794

C5orf22

G>A

2842

183914

19.1

1.239e-05

1.097

chr15:70462952

rs16954189

-

G>A

608

35579

19.0

1.308e-05

1.2

chr9:14737616

rs10961690

FREM1

G>A

3631

269043

18.94

1.35e-05

0.9188

chr1:219676042

rs2791553

-

G>A

5328

388861

18.86

1.409e-05

0.9264

chr8:106293432

rs117609532

ZFPM2

A>C

336

18038

23.05

1.581e-06

1.306

chr14:73733188

rs78932134

PAPLN

C>G

1045

63182

22.71

1.885e-06

1.167

chr9:14737506

rs10961689

FREM1

G>T

3249

243619

22.6

1.991e-06

0.9074

chr25:2692710

rs2259750

-

A>G

2580

166022

21.33

3.857e-06

1.108

chr9:14737616

rs10961690

FREM1

G>A

3403

253797

21.32

3.885e-06

0.9114

chr21:19462686

rs75502184

CHODL

G>T

370

32557

20.66

5.485e-06

0.7862

chr8:77797379

rs12542269

-

A>G

3101

231753

19.62

9.469e-06

0.9123

chr2:233486120

rs6717991

EFHD1

C>T

253

13358

19.59

9.614e-06

1.327

chr12:98342140

rs11109288

-

G>A

228

21246

19.37

1.077e-05

0.7448

chr7:95113420

rs3757704

ASB4

G>T

446

38055

18.65

1.573e-05

0.8115

chr5:31552619

rs11743794

C5orf22

G>A

2669

172542

18.56

1.642e-05

1.099

chr20:42989267

rs4812829

HNF4A

G>A

1895

144676

18.55

1.652e-05

0.8979

chr11:28062429

rs16917685

KIF18A

T>G

168

16281

18.33

1.853e-05

0.717

chr6:30832114

rs116812635

-

C>T

630

37133

18.24

1.947e-05

1.192

chr4:104734438

rs72489515

-

T>C

771

46222

18.11

2.086e-05

1.173

chr20:42915910

rs2144904

-

G>A

2434

183521

17.74

2.529e-05

0.9091

chr9:78050363

rs558354

-

T>C

2204

141333

17.69

2.602e-05

1.104

chr6:29944004

rs2245961

-

A>C

4998

332393

17.57

2.776e-05

1.079

chr10:12338120

rs7099923

-

A>C

589

34612

17.54

2.809e-05

1.195

chr19:35822884

rs117849177

CD22

C>T

158

15311

17.42

3.004e-05

0.7159

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds ratio
chr19:31911129	rs11880316	-	C>A	377	1364	29.77	4.854e-08	1.378
chr14:73733188	rs78932134	PAPLN	C>G	1077	4474	28.39	9.932e-08	1.207
chr16:7465748	rs4786166	RBFOX1	C>T	304	1071	27.59	1.502e-07	1.41
chr1:175425181	rs860905	TNR	G>A	342	1235	27.11	1.922e-07	1.378
chr9:140786516	rs12004975	CACNA1B	C>T	246	847	25.66	4.081e-07	1.445
chr15:45695612	rs1346265	SPATA5L1	C>T	205	685	24.79	6.377e-07	1.487
chr15:45694768	rs1834686	SPATA5L1	G>T	184	602	24.59	7.102e-07	1.518
chr17:58525018	rs34146848	APPBP2	C>T	191	632	24.23	8.541e-07	1.501
chr15:72607263	rs7179350	AC009690.3	C>A	302	1093	23.54	1.221e-06	1.374
chr23:68134311	rs73543624	-	G>A	363	1493	22.61	1.984e-06	1.327
chr4:111910180	rs17042615	-	C>T	271	970	22.52	2.075e-06	1.388
chr20:51408329	rs117579961	-	A>G	326	1203	22.4	2.215e-06	1.347
chr7:47566295	rs334526	TNS3	G>A	1112	4739	22.25	2.391e-06	1.178
chr3:391100	rs13060847	CHL1	G>A	203	694	21.86	2.94e-06	1.453
chr9:99707574	rs141846653	-	A>G	460	1797	21.6	3.363e-06	1.28
chr6:42450392	rs9462805	-	T>C	3761	19936	20.94	4.747e-06	0.9088
chr1:18654235	rs59004454	IGSF21	T>G	252	903	20.92	4.787e-06	1.387
chr2:30012952	rs7571379	ALK	C>T	943	3968	20.83	5.014e-06	1.186
chr2:228110691	rs115324397	COL4A3	C>A	91	738	20.8	5.102e-06	0.6045
chr4:76788564	rs34155925	PPEF2	C>T	174	583	20.76	5.21e-06	1.482
chr14:73733188	rs78932134	PAPLN	C>G	1045	4340	29.48	5.646e-08	1.215
chr20:51408329	rs117579961	-	A>G	320	1179	23.09	1.548e-06	1.357
chr6:42450392	rs9462805	-	T>C	3643	19403	20.23	6.873e-06	0.9085
chr1:219636284	rs12030989	-	C>T	5073	26592	19.81	8.547e-06	0.916
chr3:124712692	rs78365187	HEG1	T>C	196	1360	19.72	8.981e-06	0.7115
chr2:228110691	rs115324397	COL4A3	C>A	91	732	19.67	9.216e-06	0.6125
chr4:65176872	rs111795728	TECRL	G>A	373	2359	19.47	1.023e-05	0.7796
chr21:19462686	rs75502184	CHODL	G>T	370	2340	19.33	1.102e-05	0.7795
chr1:219625853	rs6541227	-	T>C	5107	26688	18.81	1.441e-05	0.9183
chr12:98342140	rs11109288	-	G>A	228	1536	18.74	1.499e-05	0.7343
chr4:152795579	rs72732129	-	G>A	270	1004	18.36	1.832e-05	1.344
chr7:95113420	rs3757704	ASB4	G>T	446	2742	18.01	2.192e-05	0.8023
chr1:15948920	rs79767050	DDI2	A>C	374	1462	17.95	2.263e-05	1.282
chr20:42989267	rs4812829	HNF4A	G>A	1895	10364	17.7	2.58e-05	0.8924
chr11:28062429	rs16917685	KIF18A	T>G	168	1175	17.53	2.827e-05	0.7075
chr9:78050363	rs558354	-	T>C	2204	10000	17.49	2.889e-05	1.114
chr18:36586116	rs17658997	-	T>C	267	999	17.47	2.922e-05	1.336
chr10:77573833	rs117082586	LRMDA	T>A	462	1857	17.4	3.027e-05	1.246
chr2:233486120	rs6717991	EFHD1	C>T	253	939	17.36	3.089e-05	1.346
chr20:42915910	rs2144904	-	G>A	2434	13148	17.23	3.316e-05	0.9033

ID	Name	Top Correlation
ICD-10: A020	Salmonella gastro-enteritis	0/20
ICD-10: C459	Mesothelioma, unspecified	0/20
ICD-10: C629	Testis, unspecified	0/20
ICD-10: E291	Testicular hypofunction	0/20
ICD-10: I861	Scrotal varices	0/20
ICD-10: N303	Trigonitis	0/20
ICD-10: N410	Acute prostatitis	0/20
ICD-10: N459	Orchitis, epididymitis and epididymo-orchitis without abscess	0/20
ICD-10: N500	Atrophy of testis	0/20
ICD-10: N600	Solitary cyst of breast	0/20
ICD-10: N649	Disorder of breast, unspecified	0/20
ICD-10: N751	Abscess of Bartholin's gland	0/20
ICD-10: N924	Excessive bleeding in the premenopausal period	0/20
ICD-10: Q668	Other congenital deformities of feet	0/20
ICD-10: T68	Hypothermia	0/20

Abnormal testis morphology

0000035

Normal Case/Contol ^ⓘ

Sibling Case/Control ^ⓘ

Links

Statistics

Phenotype Definition

Top SNP Information

Associated Diseases ^ⓘ

Abnormal testis morphology

0000035

Normal Case/Contol ⓘ

Sibling Case/Control ⓘ

Links

Statistics

Phenotype Definition

Top SNP Information Show Normal Table Show Sibling SNP

Associated Diseases ⓘ Shared SNP diseases No shared SNP diseases

Normal Case/Contol ^ⓘ

Sibling Case/Control ^ⓘ

Top SNP Information

Associated Diseases ^ⓘ