Case | Control |
---|---|
17102 | 443092 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr6:32492866 | rs111834747 | HLA-DRB5 | C>T | 12774 | 314437 | 42.11 | 8.639e-11 | 1.076 |
chr6:32546696 | rs3208409 | HLA-DRB1 | G>A | 12958 | 320068 | 39.5 | 3.281e-10 | 1.073 |
chr6:32546912 | rs34252386 | HLA-DRB1 | A>AG | 12332 | 304056 | 39.48 | 3.312e-10 | 1.075 |
chr6:32560934 | rs28366302 | - | G>C | 12993 | 321002 | 39.26 | 3.704e-10 | 1.072 |
chr6:32546879 | Affx-28486470 | HLA-DRB1 | A>G | 12969 | 320494 | 38.97 | 4.311e-10 | 1.072 |
chr6:32546557 | rs34839759 | HLA-DRB1 | C>G | 12898 | 318692 | 38.59 | 5.219e-10 | 1.072 |
chr6:32550550 | rs28724008 | HLA-DRB1 | C>G | 13255 | 328207 | 36.8 | 1.306e-09 | 1.07 |
chr6:32429643 | rs9268853 | - | T>C | 13250 | 327998 | 36.76 | 1.335e-09 | 1.07 |
chr6:32434349 | rs9268969 | - | C>T | 13308 | 329521 | 36.64 | 1.42e-09 | 1.07 |
chr6:32433167 | rs2395185 | - | G>T | 13121 | 325090 | 35.65 | 2.361e-09 | 1.069 |
chr6:32599999 | rs9272105 | HLA-DQA1 | G>A | 17401 | 464953 | 35.6 | 2.423e-09 | 0.9381 |
chr6:32636696 | rs28371206 | - | G>A | 11244 | 277214 | 34.56 | 4.132e-09 | 1.07 |
chr6:32432835 | rs9268923 | - | C>T | 13262 | 329073 | 34.21 | 4.945e-09 | 1.067 |
chr6:32637016 | rs9274697 | - | A>G | 17929 | 448915 | 33.61 | 6.724e-09 | 1.064 |
chr6:32658429 | rs9368737 | - | T>C | 13489 | 334819 | 33.39 | 7.534e-09 | 1.066 |
chr6:32600404 | rs9272116 | HLA-DQA1 | T>C | 17368 | 463884 | 33.3 | 7.887e-09 | 0.9399 |
chr6:32626249 | rs6928482 | - | T>C | 17311 | 433143 | 32.46 | 1.214e-08 | 1.063 |
chr6:32593507 | rs9271720 | - | G>A | 16393 | 437602 | 32.11 | 1.454e-08 | 0.9408 |
chr6:32657543 | rs4642516 | - | G>T | 17946 | 449882 | 31.81 | 1.701e-08 | 1.062 |
chr6:32575658 | rs3021304 | - | G>C | 15876 | 424391 | 30.61 | 3.162e-08 | 0.942 |
chr6:32492866 | rs111834747 | HLA-DRB5 | C>T | 12226 | 301963 | 38.63 | 5.121e-10 | 1.074 |
chr6:32546912 | rs34252386 | HLA-DRB1 | A>AG | 11820 | 292196 | 37.41 | 9.574e-10 | 1.075 |
chr6:32546696 | rs3208409 | HLA-DRB1 | G>A | 12403 | 307348 | 36.52 | 1.507e-09 | 1.072 |
chr6:32560934 | rs28366302 | - | G>C | 12438 | 308260 | 36.36 | 1.645e-09 | 1.072 |
chr6:32546557 | rs34839759 | HLA-DRB1 | C>G | 12353 | 306040 | 36.28 | 1.71e-09 | 1.072 |
chr6:32546879 | Affx-28486470 | HLA-DRB1 | A>G | 12421 | 308047 | 35.76 | 2.231e-09 | 1.071 |
chr6:32550550 | rs28724008 | HLA-DRB1 | C>G | 12637 | 313664 | 35.13 | 3.077e-09 | 1.07 |
chr6:32429643 | rs9268853 | - | T>C | 12656 | 313905 | 35.06 | 3.201e-09 | 1.07 |
chr6:32434349 | rs9268969 | - | C>T | 12705 | 315373 | 34.74 | 3.777e-09 | 1.07 |
chr6:32626249 | rs6928482 | - | T>C | 16362 | 409592 | 34.22 | 4.919e-09 | 1.067 |
chr6:32433167 | rs2395185 | - | G>T | 12528 | 311144 | 33.49 | 7.162e-09 | 1.069 |
chr6:32599999 | rs9272105 | HLA-DQA1 | G>A | 16284 | 435821 | 32.46 | 1.214e-08 | 0.939 |
chr6:32432835 | rs9268923 | - | C>T | 12656 | 314946 | 31.98 | 1.561e-08 | 1.067 |
chr6:32637016 | rs9274697 | - | A>G | 16772 | 420745 | 31.68 | 1.822e-08 | 1.064 |
chr6:32636696 | rs28371206 | - | G>A | 10462 | 258619 | 31.1 | 2.452e-08 | 1.069 |
chr6:32658429 | rs9368737 | - | T>C | 12517 | 311439 | 30.4 | 3.507e-08 | 1.065 |
chr6:32657543 | rs4642516 | - | G>T | 16739 | 420460 | 29.93 | 4.469e-08 | 1.062 |
chr6:32600404 | rs9272116 | HLA-DQA1 | T>C | 16259 | 434712 | 29.54 | 5.475e-08 | 0.9416 |
chr6:32593507 | rs9271720 | - | G>A | 15421 | 412389 | 29.47 | 5.667e-08 | 0.9415 |
chr6:32669767 | rs2647050 | - | T>C | 12395 | 308861 | 27.9 | 1.28e-07 | 1.062 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr8:77761586 | rs58132941 | ZFHX4 | A>G | 293 | 719 | 24.61 | 7.023e-07 | 1.412 |
chr8:77761586 | rs58132941 | ZFHX4 | A>G | 293 | 719 | 24.61 | 7.023e-07 | 1.412 |
chr8:77761586 | rs58132941 | ZFHX4 | A>G | 293 | 719 | 24.61 | 7.023e-07 | 1.412 |
chr2:202136629 | rs13386521 | CASP8 | A>C | 312 | 624 | 17.88 | 2.353e-05 | 1.343 |
chr2:202136629 | rs13386521 | CASP8 | A>C | 312 | 624 | 17.88 | 2.353e-05 | 1.343 |
chr2:202136629 | rs13386521 | CASP8 | A>C | 312 | 624 | 17.88 | 2.353e-05 | 1.343 |
chr2:169015118 | rs2218701 | STK39 | C>T | 7665 | 19698 | 17.08 | 3.589e-05 | 1.082 |
chr2:169015118 | rs2218701 | STK39 | C>T | 7665 | 19698 | 17.08 | 3.589e-05 | 1.082 |
chr2:169015118 | rs2218701 | STK39 | C>T | 7665 | 19698 | 17.08 | 3.589e-05 | 1.082 |
chr9:17306864 | rs71504855 | CNTLN | A>C | 1000 | 3952 | 15.31 | 9.128e-05 | 0.867 |
chr9:17306864 | rs71504855 | CNTLN | A>C | 1000 | 3952 | 15.31 | 9.128e-05 | 0.867 |
chr9:17306864 | rs71504855 | CNTLN | A>C | 1000 | 3952 | 15.31 | 9.128e-05 | 0.867 |
chr9:16986264 | Affx-33457614 | - | A>G | 1510 | 4669 | 15.28 | 9.29e-05 | 1.129 |
chr9:16986264 | Affx-33457614 | - | A>G | 1510 | 4669 | 15.28 | 9.29e-05 | 1.129 |
chr9:16986264 | Affx-33457614 | - | A>G | 1510 | 4669 | 15.28 | 9.29e-05 | 1.129 |
chr9:15091826 | rs4741455 | - | T>C | 1202 | 3667 | 15.12 | 0.000101 | 1.143 |
chr9:15091826 | rs4741455 | - | T>C | 1202 | 3667 | 15.12 | 0.000101 | 1.143 |
chr9:15091826 | rs4741455 | - | T>C | 1202 | 3667 | 15.12 | 0.000101 | 1.143 |
chr2:164660602 | rs72870593 | - | T>C | 672 | 2127 | 15.1 | 0.0001018 | 0.8387 |
chr2:164660602 | rs72870593 | - | T>C | 672 | 2127 | 15.1 | 0.0001018 | 0.8387 |
chr2:164660602 | rs72870593 | - | T>C | 672 | 2127 | 15.1 | 0.0001018 | 0.8387 |
chr8:77782841 | rs12678515 | - | C>T | 283 | 748 | 15.03 | 0.0001057 | 1.312 |
chr8:77782841 | rs12678515 | - | C>T | 283 | 748 | 15.03 | 0.0001057 | 1.312 |
chr8:77782841 | rs12678515 | - | C>T | 283 | 748 | 15.03 | 0.0001057 | 1.312 |
chr2:138066736 | rs12478589 | THSD7B | C>T | 458 | 989 | 14.79 | 0.0001201 | 1.246 |
chr2:138066736 | rs12478589 | THSD7B | C>T | 458 | 989 | 14.79 | 0.0001201 | 1.246 |
chr2:138066736 | rs12478589 | THSD7B | C>T | 458 | 989 | 14.79 | 0.0001201 | 1.246 |
chr8:90361672 | rs79152943 | - | G>A | 601 | 2462 | 14.69 | 0.0001266 | 0.8374 |
chr8:90361672 | rs79152943 | - | G>A | 601 | 2462 | 14.69 | 0.0001266 | 0.8374 |
chr8:90361672 | rs79152943 | - | G>A | 601 | 2462 | 14.69 | 0.0001266 | 0.8374 |
chr8:129072161 | rs2648875 | - | G>A | 4335 | 14141 | 14.55 | 0.0001367 | 1.079 |
chr8:129072161 | rs2648875 | - | G>A | 4335 | 14141 | 14.55 | 0.0001367 | 1.079 |
chr8:129072161 | rs2648875 | - | G>A | 4335 | 14141 | 14.55 | 0.0001367 | 1.079 |
chr2:197140572 | rs6710182 | HECW2 | C>T | 783 | 1787 | 14.52 | 0.0001386 | 1.182 |
chr2:197140572 | rs6710182 | HECW2 | C>T | 783 | 1787 | 14.52 | 0.0001386 | 1.182 |
chr2:197140572 | rs6710182 | HECW2 | C>T | 783 | 1787 | 14.52 | 0.0001386 | 1.182 |
chr2:174768077 | rs75088951 | SP3 | T>G | 483 | 1566 | 14.2 | 0.0001645 | 0.8194 |
chr2:174768077 | rs75088951 | SP3 | T>G | 483 | 1566 | 14.2 | 0.0001645 | 0.8194 |
chr2:174768077 | rs75088951 | SP3 | T>G | 483 | 1566 | 14.2 | 0.0001645 | 0.8194 |
chr9:16661933 | rs2183405 | BNC2 | G>A | 6144 | 20311 | 14.19 | 0.0001652 | 1.071 |
chr9:16661933 | rs2183405 | BNC2 | G>A | 6144 | 20311 | 14.19 | 0.0001652 | 1.071 |
chr9:16661933 | rs2183405 | BNC2 | G>A | 6144 | 20311 | 14.19 | 0.0001652 | 1.071 |
chr3:14604672 | rs7647806 | - | A>C | 7169 | 19915 | 14.04 | 0.0001785 | 0.9314 |
chr3:14604672 | rs7647806 | - | A>C | 7169 | 19915 | 14.04 | 0.0001785 | 0.9314 |
chr3:14604672 | rs7647806 | - | A>C | 7169 | 19915 | 14.04 | 0.0001785 | 0.9314 |
chr8:97576436 | rs2575712 | SDC2 | G>T | 3522 | 11420 | 13.96 | 0.0001871 | 1.084 |
chr8:97576436 | rs2575712 | SDC2 | G>T | 3522 | 11420 | 13.96 | 0.0001871 | 1.084 |
chr8:97576436 | rs2575712 | SDC2 | G>T | 3522 | 11420 | 13.96 | 0.0001871 | 1.084 |
chr8:134334904 | rs2976589 | - | C>T | 4241 | 15483 | 13.86 | 0.0001972 | 0.9281 |
chr8:134334904 | rs2976589 | - | C>T | 4241 | 15483 | 13.86 | 0.0001972 | 0.9281 |
chr8:134334904 | rs2976589 | - | C>T | 4241 | 15483 | 13.86 | 0.0001972 | 0.9281 |
chr2:202363838 | rs76661162 | C2CD6 | C>A | 319 | 664 | 13.8 | 0.0002032 | 1.29 |
chr2:202363838 | rs76661162 | C2CD6 | C>A | 319 | 664 | 13.8 | 0.0002032 | 1.29 |
chr2:202363838 | rs76661162 | C2CD6 | C>A | 319 | 664 | 13.8 | 0.0002032 | 1.29 |
chr2:240736848 | rs6761699 | - | C>T | 1494 | 3583 | 13.61 | 0.0002254 | 1.127 |
chr2:240736848 | rs6761699 | - | C>T | 1494 | 3583 | 13.61 | 0.0002254 | 1.127 |
chr2:240736848 | rs6761699 | - | C>T | 1494 | 3583 | 13.61 | 0.0002254 | 1.127 |
chr8:140589442 | rs75529511 | - | C>T | 1028 | 4023 | 13.51 | 0.0002372 | 0.8758 |
chr8:140589442 | rs75529511 | - | C>T | 1028 | 4023 | 13.51 | 0.0002372 | 0.8758 |
chr8:140589442 | rs75529511 | - | C>T | 1028 | 4023 | 13.51 | 0.0002372 | 0.8758 |
ID | Name | Top Correlation |
---|---|---|
ICD: L900 | Lichen sclerosus et atrophicus | 4/20 |
ICD: N47 | Redundant prepuce, phimosis and paraphimosis | 11/20 |