Statistics
| Case | Control |
|---|---|
| 154 | 460040 |
Phenotype Definition
Penile length more than 2 SD above the mean for age. []
Phenotype Comment
Penile length is the distance between the midline attachment of the gently stretched, flaccid penis above the pubic symphysis and tip of the glans.
Top SNP Information
| Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
|---|---|---|---|---|---|---|---|---|
| chr5:23013765 | rs77506071 | - | A>G | 29 | 33154 | 31.71 | 1.792e-08 | 2.855 |
| chr7:7457571 | rs78066683 | COL28A1 | G>A | 17 | 15382 | 29.43 | 5.792e-08 | 3.55 |
| chr8:132216978 | rs75996652 | - | G>A | 35 | 45591 | 29.07 | 6.985e-08 | 2.541 |
| chr13:32866537 | rs117220861 | FRY | T>G | 28 | 33103 | 28.73 | 8.337e-08 | 2.765 |
| chr7:45993732 | rs11760757 | - | A>G | 27 | 31774 | 28.62 | 8.801e-08 | 2.805 |
| chr3:14434934 | rs76451793 | - | G>A | 13 | 10322 | 28.16 | 1.119e-07 | 4.012 |
| chr6:13749051 | rs76064152 | - | A>G | 19 | 19051 | 27.17 | 1.867e-07 | 3.211 |
| chr11:23399304 | rs75971177 | - | C>T | 19 | 19133 | 26.95 | 2.086e-07 | 3.198 |
| chr4:99898118 | rs115697119 | - | G>A | 18 | 17791 | 26.86 | 2.193e-07 | 3.28 |
| chr2:67874342 | rs71412001 | - | C>T | 36 | 49306 | 26.18 | 3.111e-07 | 2.406 |
| chr3:14446410 | rs76875652 | SLC6A6 | C>T | 13 | 10826 | 26.18 | 3.117e-07 | 3.843 |
| chr4:122966020 | rs79564418 | - | T>C | 14 | 12223 | 25.75 | 3.883e-07 | 3.653 |
| chr5:100632099 | rs78973579 | - | T>C | 35 | 48349 | 25.22 | 5.109e-07 | 2.395 |
| chr5:23028305 | rs79378681 | - | C>A | 19 | 19958 | 25.05 | 5.596e-07 | 3.08 |
| chr8:132123942 | rs116879997 | - | G>T | 48 | 75063 | 24.96 | 5.865e-07 | 2.148 |
| chr12:81052188 | rs117714704 | PTPRQ | T>C | 13 | 11113 | 24.49 | 7.476e-07 | 3.697 |
| chr2:180385225 | rs78540077 | ZNF385B | T>G | 21 | 23578 | 24.14 | 8.966e-07 | 2.886 |
| chr1:118301990 | rs77444953 | - | G>A | 32 | 44053 | 23.06 | 1.568e-06 | 2.383 |
| chr17:75225862 | rs1124886 | - | T>C | 32 | 44271 | 22.93 | 1.68e-06 | 2.378 |
| chr16:23578434 | rs2234433 | UBFD1 | A>G | 17 | 17554 | 22.86 | 1.74e-06 | 3.1 |
| chr3:14434934 | rs76451793 | - | G>A | 13 | 9402 | 31.09 | 2.466e-08 | 4.266 |
| chr7:7457571 | rs78066683 | COL28A1 | G>A | 17 | 14658 | 30.23 | 3.836e-08 | 3.607 |
| chr3:14446410 | rs76875652 | SLC6A6 | C>T | 13 | 9741 | 29.57 | 5.384e-08 | 4.137 |
| chr5:23013765 | rs77506071 | - | A>G | 28 | 31736 | 28.99 | 7.282e-08 | 2.78 |
| chr13:32866537 | rs117220861 | FRY | T>G | 28 | 32297 | 28.19 | 1.101e-07 | 2.744 |
| chr4:99898118 | rs115697119 | - | G>A | 18 | 17517 | 25.97 | 3.47e-07 | 3.225 |
| chr11:23399304 | rs75971177 | - | C>T | 19 | 18882 | 25.91 | 3.58e-07 | 3.136 |
| chr2:67874342 | rs71412001 | - | C>T | 36 | 48396 | 25.22 | 5.107e-07 | 2.372 |
| chr8:132216978 | rs75996652 | - | G>A | 34 | 44909 | 25.11 | 5.424e-07 | 2.417 |
| chr2:180385225 | rs78540077 | ZNF385B | T>G | 21 | 22438 | 24.99 | 5.775e-07 | 2.938 |
| chr4:122966020 | rs79564418 | - | T>C | 14 | 12084 | 24.76 | 6.496e-07 | 3.575 |
| chr5:100632099 | rs78973579 | - | T>C | 35 | 47424 | 24.37 | 7.954e-07 | 2.364 |
| chr7:45993732 | rs11760757 | - | A>G | 26 | 31312 | 24.29 | 8.294e-07 | 2.644 |
| chr6:13749051 | rs76064152 | - | A>G | 17 | 16617 | 23.88 | 1.023e-06 | 3.173 |
| chr12:81052188 | rs117714704 | PTPRQ | T>C | 12 | 9645 | 23.74 | 1.102e-06 | 3.798 |
| chr1:118301990 | rs77444953 | - | G>A | 32 | 43074 | 22.44 | 2.169e-06 | 2.359 |
| chr3:158068650 | rs77772212 | RSRC1 | A>G | 13 | 11440 | 22.18 | 2.479e-06 | 3.498 |
| chr16:23578434 | rs2234433 | UBFD1 | A>G | 17 | 17244 | 22.16 | 2.506e-06 | 3.054 |
| chr1:40813389 | rs75494097 | SMAP2 | T>C | 14 | 12976 | 22.03 | 2.679e-06 | 3.353 |
| chr1:12253062 | rs5746026 | TNFRSF1B | G>A | 28 | 36017 | 21.89 | 2.892e-06 | 2.453 |
| Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
|---|---|---|---|---|---|---|---|---|
| chr4:99898118 | rs115697119 | - | G>A | 18 | 599 | 29.07 | 6.991e-08 | 3.48 |
| chr7:7457571 | rs78066683 | COL28A1 | G>A | 17 | 543 | 29.07 | 6.997e-08 | 3.587 |
| chr13:32866537 | rs117220861 | FRY | T>G | 28 | 1167 | 28.76 | 8.196e-08 | 2.799 |
| chr3:14434934 | rs76451793 | - | G>A | 13 | 363 | 27.82 | 1.33e-07 | 4.068 |
| chr11:23399304 | rs75971177 | - | C>T | 19 | 672 | 26.98 | 2.058e-07 | 3.247 |
| chr3:14446410 | rs76875652 | SLC6A6 | C>T | 13 | 373 | 26.84 | 2.206e-07 | 3.98 |
| chr2:180385225 | rs78540077 | ZNF385B | T>G | 21 | 801 | 26.03 | 3.356e-07 | 3.036 |
| chr5:100632099 | rs78973579 | - | T>C | 35 | 1693 | 25.97 | 3.462e-07 | 2.447 |
| chr8:132216978 | rs75996652 | - | G>A | 34 | 1646 | 24.95 | 5.872e-07 | 2.43 |
| chr7:45993732 | rs11760757 | - | A>G | 26 | 1130 | 24.91 | 6.022e-07 | 2.701 |
| chr2:67874342 | rs71412001 | - | C>T | 36 | 1781 | 24.85 | 6.201e-07 | 2.376 |
| chr5:23013765 | rs77506071 | - | A>G | 28 | 1247 | 24.49 | 7.486e-07 | 2.598 |
| chr12:81052188 | rs117714704 | PTPRQ | T>C | 12 | 344 | 24.34 | 8.073e-07 | 3.93 |
| chr1:118301990 | rs77444953 | - | G>A | 32 | 1537 | 23.87 | 1.031e-06 | 2.439 |
| chr1:40813389 | rs75494097 | SMAP2 | T>C | 14 | 456 | 23.33 | 1.362e-06 | 3.516 |
| chr3:158068650 | rs77772212 | RSRC1 | A>G | 13 | 404 | 23.24 | 1.429e-06 | 3.653 |
| chr4:122966020 | rs79564418 | - | T>C | 14 | 458 | 22.85 | 1.752e-06 | 3.474 |
| chr8:144618480 | rs11548254 | ZC3H3 | G>T | 14 | 458 | 22.79 | 1.809e-06 | 3.468 |
| chr1:12253062 | rs5746026 | TNFRSF1B | G>A | 28 | 1295 | 22.76 | 1.833e-06 | 2.516 |
| chr1:12250188 | rs5746012 | TNFRSF1B | C>A | 28 | 1297 | 22.62 | 1.971e-06 | 2.509 |
Associated Diseases ⓘ
| ID | Name | Top Correlation |
|---|
| ID | Name | Top Correlation |
|---|