Case | Control |
---|---|
28063 | 432131 |
Increased levels of protein in the urine. [HPO:probinson]
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr5:33951693 | rs16891982 | SLC45A2 | G>C | 7567 | 59491 | 2690.0 | 0.0 | 1.937 |
chr5:33958959 | rs28777 | SLC45A2 | A>C | 6426 | 50566 | 2254.0 | 0.0 | 1.917 |
chr5:33955326 | rs35390 | SLC45A2 | A>C | 4611 | 36536 | 1552.0 | 0.0 | 1.874 |
chr5:33955673 | rs35391 | SLC45A2 | C>T | 4595 | 36385 | 1550.0 | 0.0 | 1.876 |
chr5:33951116 | rs35397 | SLC45A2 | T>G | 8610 | 81498 | 1513.0 | 0.0 | 1.599 |
chr16:28995057 | rs11859822 | SPNS1 | T>C | 3477 | 25959 | 1398.0 | 5.354e-306 | 1.975 |
chr16:28954860 | rs7203982 | - | T>C | 3463 | 25919 | 1383.0 | 9.336e-303 | 1.971 |
chr23:128718936 | rs2362937 | OCRL | T>C | 2382 | 17569 | 1242.0 | 4.782e-272 | 2.161 |
chr16:28974658 | rs8044999 | NFATC2IP | A>G | 2909 | 21536 | 1194.0 | 1.02e-261 | 1.984 |
chr15:48426484 | rs1426654 | SLC24A5 | A>G | 3185 | 24341 | 1189.0 | 1.487e-260 | 1.924 |
chr15:48392165 | rs1834640 | - | A>G | 3505 | 28119 | 1119.0 | 1.966e-245 | 1.834 |
chr23:102201216 | rs725570 | - | A>G | 2214 | 16756 | 1076.0 | 5.749e-236 | 2.101 |
chr19:42393286 | rs717225 | ARHGEF1 | A>G | 2613 | 19330 | 1072.0 | 3.661e-235 | 1.98 |
chr6:100241479 | rs9495569 | - | A>G | 2657 | 20046 | 1028.0 | 1.558e-225 | 1.942 |
chr2:66725070 | rs12995572 | MEIS1 | G>C | 3048 | 24103 | 1021.0 | 5.955e-224 | 1.857 |
chr23:71628912 | rs3012642 | AL133500.1 | A>G | 2509 | 20215 | 1020.0 | 8.055e-224 | 1.977 |
chr15:65114484 | rs8031690 | PIF1 | G>A | 1609 | 10111 | 1014.0 | 1.979e-222 | 2.317 |
chr2:171380643 | rs34020565 | MYO3B | T>G | 2830 | 22029 | 994.0 | 3.534e-218 | 1.883 |
chr19:42392441 | rs16975619 | ARHGEF1 | T>C | 2387 | 17623 | 983.4 | 7.155e-216 | 1.981 |
chr16:28949473 | rs2070961 | CD19 | C>T | 2348 | 17377 | 960.0 | 8.734e-211 | 1.975 |
chr10:114758349 | rs7903146 | TCF7L2 | C>T | 18644 | 243508 | 653.3 | 4.222e-144 | 1.268 |
chr10:114756041 | rs4506565 | TCF7L2 | A>T | 20049 | 267056 | 571.9 | 2.126e-126 | 1.243 |
chr10:114788815 | rs12243326 | TCF7L2 | T>C | 18175 | 241030 | 526.7 | 1.454e-116 | 1.239 |
chr10:114808902 | rs12255372 | TCF7L2 | G>T | 18385 | 244434 | 514.9 | 5.473e-114 | 1.235 |
chr10:114781297 | rs10787472 | TCF7L2 | A>C | 27758 | 400057 | 211.5 | 6.554e-48 | 1.135 |
chr10:114736614 | rs11196175 | TCF7L2 | T>C | 17215 | 241250 | 199.9 | 2.144e-45 | 1.143 |
chr10:114740745 | rs7081062 | TCF7L2 | A>G | 19817 | 323653 | 102.6 | 4.168e-24 | 0.9119 |
chr3:185529080 | rs1470579 | IGF2BP2 | A>C | 18734 | 270931 | 101.5 | 6.981e-24 | 1.098 |
chr6:20686996 | rs9368222 | CDKAL1 | C>A | 15682 | 224974 | 101.3 | 7.874e-24 | 1.103 |
chr6:20679709 | rs7756992 | CDKAL1 | A>G | 15926 | 228510 | 101.0 | 9.278e-24 | 1.102 |
chr3:185530290 | rs6769511 | IGF2BP2 | T>C | 18741 | 270985 | 100.9 | 9.744e-24 | 1.097 |
chr3:185513392 | rs7651090 | IGF2BP2 | A>G | 18690 | 270207 | 100.9 | 9.655e-24 | 1.097 |
chr6:20717255 | rs9465871 | CDKAL1 | T>C | 10875 | 153205 | 98.08 | 4.024e-23 | 1.116 |
chr3:185511687 | rs4402960 | IGF2BP2 | G>T | 18662 | 269987 | 97.91 | 4.371e-23 | 1.096 |
chr16:53809247 | rs1121980 | FTO | G>A | 24839 | 364178 | 97.06 | 6.738e-23 | 1.09 |
chr6:20694884 | rs2206734 | CDKAL1 | C>T | 10748 | 151409 | 95.96 | 1.172e-22 | 1.115 |
chr16:53800754 | rs9940128 | FTO | G>A | 24845 | 364348 | 95.36 | 1.585e-22 | 1.09 |
chr16:53800954 | rs1421085 | FTO | T>C | 23709 | 346981 | 94.82 | 2.083e-22 | 1.09 |
chr9:22132076 | rs2383208 | - | A>G | 9127 | 154266 | 91.28 | 1.249e-21 | 0.8936 |
chr16:53818460 | rs3751812 | FTO | G>T | 23139 | 338720 | 91.17 | 1.321e-21 | 1.088 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr10:114758349 | rs7903146 | TCF7L2 | C>T | 18644 | 1194 | 72.34 | 1.809e-17 | 1.347 |
chr10:114808902 | rs12255372 | TCF7L2 | G>T | 18385 | 1201 | 58.33 | 2.221e-14 | 1.306 |
chr10:114756041 | rs4506565 | TCF7L2 | A>T | 20049 | 1328 | 58.32 | 2.228e-14 | 1.295 |
chr10:114788815 | rs12243326 | TCF7L2 | T>C | 18175 | 1196 | 53.51 | 2.567e-13 | 1.291 |
chr2:44073656 | rs41360247 | ABCG8 | T>C | 3554 | 374 | 30.84 | 2.808e-08 | 0.7305 |
chr2:44066247 | Affx-20090007 | ABCG8 | G>C | 3687 | 385 | 30.06 | 4.196e-08 | 0.7365 |
chr10:114781297 | rs10787472 | TCF7L2 | A>C | 27758 | 2006 | 27.99 | 1.217e-07 | 1.181 |
chr2:44065090 | Affx-20089987 | ABCG5 | G>A | 3545 | 369 | 27.84 | 1.315e-07 | 0.7407 |
chr10:114736614 | rs11196175 | TCF7L2 | T>C | 17215 | 1199 | 24.57 | 7.179e-07 | 1.19 |
chr6:45410323 | rs34454023 | RUNX2 | G>A | 2337 | 250 | 22.58 | 2.016e-06 | 0.7233 |
chr6:32130329 | rs34129552 | PPT2 | C>G | 1349 | 157 | 22.22 | 2.427e-06 | 0.669 |
chr7:139176178 | rs11970854 | - | C>T | 7616 | 711 | 21.67 | 3.243e-06 | 0.8198 |
chr8:88413427 | rs3922614 | CNBD1 | T>C | 19483 | 1689 | 21.54 | 3.457e-06 | 0.8611 |
chr4:42199292 | rs35250584 | - | T>C | 6338 | 600 | 20.52 | 5.891e-06 | 0.8125 |
chr13:86505830 | rs9547448 | - | A>G | 12727 | 1136 | 20.52 | 5.889e-06 | 0.85 |
chr1:23090913 | rs75642872 | EPHB2 | C>T | 564 | 76 | 20.01 | 7.709e-06 | 0.5802 |
chr6:32654714 | rs9275184 | - | T>C | 6312 | 401 | 19.96 | 7.893e-06 | 1.273 |
chr6:164323224 | rs74704862 | - | A>T | 906 | 111 | 19.86 | 8.321e-06 | 0.6377 |
chr6:8162337 | rs77686438 | - | A>G | 858 | 106 | 19.84 | 8.431e-06 | 0.6313 |
chr20:18357556 | rs78209042 | - | C>T | 948 | 115 | 19.77 | 8.732e-06 | 0.6433 |