Case | Control |
---|---|
6610 | 453584 |
An acute form of sinusitis. [HPO:probinson]
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr5:24486805 | rs1169561 | - | T>C | 1918 | 117506 | 25.37 | 4.744e-07 | 1.133 |
chr5:147588167 | rs17637955 | SPINK6 | T>C | 460 | 25142 | 23.16 | 1.494e-06 | 1.258 |
chr6:32607376 | rs34250758 | HLA-DQA1 | G>A | 2969 | 187294 | 22.57 | 2.026e-06 | 1.104 |
chr14:99600910 | rs55727874 | - | C>T | 917 | 72740 | 22.17 | 2.495e-06 | 0.8507 |
chr20:49130326 | rs13042585 | PTPN1 | A>G | 231 | 21505 | 22.14 | 2.531e-06 | 0.7315 |
chr12:98579440 | rs1531650 | - | C>A | 6232 | 444270 | 21.67 | 3.246e-06 | 0.9235 |
chr5:147922433 | rs79194540 | HTR4 | C>G | 495 | 27599 | 20.82 | 5.042e-06 | 1.234 |
chr19:533201 | rs12984645 | CDC34 | G>A | 4493 | 289857 | 20.79 | 5.119e-06 | 1.087 |
chr4:5709244 | rs66742434 | EVC2 | G>A | 3696 | 236318 | 20.69 | 5.413e-06 | 1.092 |
chr1:213753834 | rs12026459 | - | G>A | 634 | 51550 | 20.39 | 6.332e-06 | 0.8316 |
chr5:2117880 | rs72710637 | - | A>G | 1306 | 79050 | 20.34 | 6.496e-06 | 1.141 |
chr4:37869505 | rs78678504 | - | G>A | 1627 | 100022 | 20.11 | 7.309e-06 | 1.127 |
chr5:147932610 | rs79292644 | HTR4 | G>A | 513 | 28797 | 19.99 | 7.765e-06 | 1.225 |
chr21:48070710 | rs75627902 | PRMT2 | G>A | 437 | 24138 | 19.96 | 7.915e-06 | 1.244 |
chr5:24495464 | rs1169559 | CDH10 | T>C | 1940 | 120433 | 19.94 | 8.011e-06 | 1.116 |
chr5:149772280 | rs1136103 | TCOF1 | C>G | 2608 | 193704 | 19.85 | 8.376e-06 | 0.9064 |
chr5:165332886 | rs28522930 | - | A>G | 482 | 26916 | 19.85 | 8.363e-06 | 1.231 |
chr5:147865692 | rs76657877 | HTR4 | C>T | 487 | 27250 | 19.54 | 9.874e-06 | 1.228 |
chr5:147905679 | rs74606029 | HTR4 | C>T | 507 | 28505 | 19.53 | 9.903e-06 | 1.223 |
chr2:120188728 | rs72833250 | TMEM37 | A>G | 449 | 25062 | 19.45 | 1.031e-05 | 1.238 |
chr5:147588167 | rs17637955 | SPINK6 | T>C | 456 | 24801 | 24.97 | 5.808e-07 | 1.271 |
chr5:24486805 | rs1169561 | - | T>C | 1762 | 108234 | 24.11 | 9.091e-07 | 1.135 |
chr18:46441577 | rs77683391 | - | G>A | 665 | 37854 | 23.84 | 1.045e-06 | 1.216 |
chr5:2117880 | rs72710637 | - | A>G | 1223 | 73332 | 23.63 | 1.165e-06 | 1.158 |
chr18:46431392 | rs9962425 | - | C>G | 904 | 53218 | 22.42 | 2.188e-06 | 1.179 |
chr14:99600910 | rs55727874 | - | C>T | 883 | 70583 | 22.27 | 2.37e-06 | 0.8477 |
chr8:69419631 | rs10504425 | C8orf34 | T>C | 1015 | 60277 | 22.19 | 2.465e-06 | 1.168 |
chr12:98579440 | rs1531650 | - | C>A | 5831 | 418295 | 21.88 | 2.902e-06 | 0.9207 |
chr4:37869505 | rs78678504 | - | G>A | 1565 | 96090 | 21.59 | 3.381e-06 | 1.134 |
chr5:147932610 | rs79292644 | HTR4 | G>A | 484 | 26929 | 21.55 | 3.448e-06 | 1.242 |
chr5:147891932 | rs58710455 | HTR4 | T>C | 481 | 26793 | 21.41 | 3.7e-06 | 1.242 |
chr5:147905679 | rs74606029 | HTR4 | C>T | 480 | 26744 | 21.16 | 4.222e-06 | 1.24 |
chr20:49130326 | rs13042585 | PTPN1 | A>G | 226 | 21052 | 21.16 | 4.225e-06 | 0.7341 |
chr5:147876489 | rs78924106 | HTR4 | C>T | 481 | 26813 | 21.13 | 4.295e-06 | 1.24 |
chr5:147934169 | rs76912074 | HTR4 | G>A | 477 | 26597 | 21.02 | 4.554e-06 | 1.24 |
chr5:147911716 | rs6865878 | HTR4 | G>C | 479 | 26701 | 20.91 | 4.813e-06 | 1.239 |
chr5:147932896 | rs76818808 | HTR4 | T>C | 481 | 26854 | 20.85 | 4.966e-06 | 1.238 |
chr6:32607376 | rs34250758 | HLA-DQA1 | G>A | 2842 | 180448 | 20.64 | 5.551e-06 | 1.102 |
chr5:147922433 | rs79194540 | HTR4 | C>G | 479 | 26798 | 20.39 | 6.324e-06 | 1.236 |
chr23:142989315 | rs6637101 | - | T>C | 2469 | 186652 | 20.35 | 6.464e-06 | 0.9001 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr2:233636922 | rs11893358 | GIGYF2 | C>T | 4747 | 3002 | 48.4 | 3.468e-12 | 0.8121 |
chr2:233592487 | rs6704763 | GIGYF2 | A>G | 4822 | 3042 | 47.54 | 5.38e-12 | 0.8143 |
chr6:32607376 | rs34250758 | HLA-DQA1 | G>A | 2842 | 1856 | 39.48 | 3.32e-10 | 0.8065 |
chr9:6193455 | rs2381416 | - | A>C | 3617 | 2316 | 39.3 | 3.642e-10 | 0.8194 |
chr9:6192796 | rs2095044 | - | C>T | 3519 | 2255 | 37.36 | 9.836e-10 | 0.8222 |
chr6:32581973 | rs521539 | - | G>A | 2986 | 1928 | 33.8 | 6.121e-09 | 0.8222 |
chr6:32577380 | rs660895 | - | A>G | 2990 | 1929 | 33.46 | 7.273e-09 | 0.823 |
chr6:32577973 | rs532965 | - | T>G | 2675 | 1744 | 33.22 | 8.232e-09 | 0.8178 |
chr6:32582650 | rs3104413 | - | C>G | 2657 | 1730 | 31.07 | 2.494e-08 | 0.8225 |
chr6:32583357 | rs6931277 | - | A>T | 2617 | 1712 | 30.89 | 2.731e-08 | 0.8219 |
chr9:6197377 | rs10975479 | - | A>G | 2298 | 1508 | 29.99 | 4.341e-08 | 0.8172 |
chr6:32667343 | rs9275338 | - | A>T | 1768 | 1188 | 29.63 | 5.224e-08 | 0.8014 |
chr17:64341612 | rs59259080 | PRKCA | A>G | 515 | 406 | 29.34 | 6.061e-08 | 0.693 |
chr5:110401872 | rs1837253 | - | C>T | 3302 | 1601 | 27.86 | 1.303e-07 | 1.201 |
chr6:32665728 | rs9275312 | - | A>G | 1820 | 1213 | 27.48 | 1.585e-07 | 0.8097 |
chr6:32628189 | rs9273489 | HLA-DQB1 | A>G | 1752 | 1171 | 27.22 | 1.819e-07 | 0.808 |
chr2:233745521 | Affx-19484179 | NGEF | C>T | 3822 | 2380 | 26.06 | 3.313e-07 | 0.8517 |
chr6:32682429 | rs9275599 | - | C>T | 1386 | 943 | 25.6 | 4.196e-07 | 0.7968 |
chr9:6190076 | rs1342326 | - | A>C | 2300 | 1487 | 25.03 | 5.651e-07 | 0.8311 |
chr6:32654714 | rs9275184 | - | T>C | 1453 | 981 | 24.65 | 6.859e-07 | 0.8032 |
ID | Name | Top Correlation |
---|---|---|
ICD: J329 | Chronic sinusitis, unspecified | 1/20 |