Case | Control |
---|---|
56076 | 404118 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr6:396321 | rs12203592 | IRF4 | C>T | 25549 | 175656 | 61.9 | 3.61e-15 | 1.061 |
chr6:421281 | rs62389423 | - | G>A | 20693 | 143343 | 34.01 | 5.481e-09 | 1.049 |
chr13:58278527 | rs7338138 | PCDH17 | G>A | 21578 | 150026 | 29.58 | 5.367e-08 | 1.045 |
chr6:25918225 | rs80215559 | SLC17A2 | T>C | 9020 | 61364 | 28.23 | 1.077e-07 | 1.064 |
chr6:25842951 | rs1408272 | SLC17A3 | T>G | 9291 | 63388 | 26.34 | 2.867e-07 | 1.061 |
chr6:32626302 | rs9273364 | - | T>G | 35002 | 246305 | 25.84 | 3.706e-07 | 1.035 |
chr9:93514742 | rs34993748 | - | C>T | 6499 | 49965 | 25.73 | 3.919e-07 | 0.9335 |
chr6:32667850 | rs9275356 | - | C>G | 12469 | 85867 | 25.2 | 5.157e-07 | 1.052 |
chr6:32577973 | rs532965 | - | T>G | 22624 | 157913 | 24.83 | 6.262e-07 | 1.04 |
chr13:58277306 | rs7326551 | PCDH17 | A>C | 28999 | 203390 | 24.72 | 6.637e-07 | 1.037 |
chr6:32583357 | rs6931277 | - | A>T | 22114 | 154578 | 24.58 | 7.123e-07 | 1.04 |
chr6:32582650 | rs3104413 | - | C>G | 22426 | 156643 | 24.2 | 8.667e-07 | 1.04 |
chr6:32681530 | rs3957146 | - | T>C | 12449 | 85801 | 24.02 | 9.514e-07 | 1.051 |
chr6:32602396 | rs9272226 | HLA-DQA1 | T>C | 44558 | 314781 | 24.01 | 9.567e-07 | 1.032 |
chr6:32667107 | rs9275334 | - | T>C | 12100 | 83351 | 23.99 | 9.691e-07 | 1.052 |
chr6:32626272 | rs9273363 | - | C>A | 35914 | 252887 | 23.79 | 1.077e-06 | 1.033 |
chr6:32681483 | rs7454108 | - | T>C | 12448 | 85813 | 23.6 | 1.187e-06 | 1.05 |
chr6:32654714 | rs9275184 | - | T>C | 12318 | 84938 | 23.57 | 1.205e-06 | 1.051 |
chr14:81464084 | rs79746054 | TSHR | T>C | 4475 | 29908 | 22.98 | 1.64e-06 | 1.081 |
chr6:32682137 | Affx-28502500 | - | A>G | 12616 | 87099 | 22.93 | 1.676e-06 | 1.049 |
chr6:396321 | rs12203592 | IRF4 | C>T | 25265 | 173650 | 62.23 | 3.051e-15 | 1.062 |
chr6:421281 | rs62389423 | - | G>A | 20415 | 141450 | 33.38 | 7.592e-09 | 1.049 |
chr6:25918225 | rs80215559 | SLC17A2 | T>C | 8925 | 60770 | 27.14 | 1.895e-07 | 1.063 |
chr13:58278527 | rs7338138 | PCDH17 | G>A | 21136 | 147226 | 25.98 | 3.447e-07 | 1.043 |
chr6:32626302 | rs9273364 | - | T>G | 33558 | 235944 | 25.72 | 3.945e-07 | 1.036 |
chr6:25842951 | rs1408272 | SLC17A3 | T>G | 9183 | 62701 | 25.29 | 4.94e-07 | 1.06 |
chr6:32626272 | rs9273363 | - | C>A | 34419 | 242186 | 24.09 | 9.215e-07 | 1.035 |
chr6:32667850 | rs9275356 | - | C>G | 11995 | 82618 | 23.98 | 9.71e-07 | 1.052 |
chr6:32583357 | rs6931277 | - | A>T | 21396 | 149560 | 23.59 | 1.194e-06 | 1.04 |
chr6:32577973 | rs532965 | - | T>G | 21875 | 152792 | 23.01 | 1.612e-06 | 1.039 |
chr6:32582650 | rs3104413 | - | C>G | 21680 | 151514 | 22.89 | 1.711e-06 | 1.039 |
chr13:58277306 | rs7326551 | PCDH17 | A>C | 28218 | 198068 | 22.8 | 1.798e-06 | 1.036 |
chr6:32681530 | rs3957146 | - | T>C | 11975 | 82552 | 22.77 | 1.822e-06 | 1.051 |
chr4:151340224 | rs116557628 | LRBA | T>C | 2448 | 15920 | 22.67 | 1.924e-06 | 1.11 |
chr6:32667107 | rs9275334 | - | T>C | 11631 | 80144 | 22.4 | 2.219e-06 | 1.051 |
chr4:151673310 | rs115840608 | LRBA | T>C | 5109 | 34354 | 22.32 | 2.304e-06 | 1.075 |
chr6:32681483 | rs7454108 | - | T>C | 11973 | 82564 | 22.3 | 2.336e-06 | 1.05 |
chr6:92914849 | rs71558410 | - | G>A | 2585 | 20526 | 22.09 | 2.601e-06 | 0.9055 |
chr6:32654714 | rs9275184 | - | T>C | 11849 | 81767 | 22.0 | 2.732e-06 | 1.05 |
chr6:32682137 | Affx-28502500 | - | A>G | 12057 | 83235 | 21.98 | 2.749e-06 | 1.05 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr4:45420749 | rs13151935 | - | T>C | 20110 | 41069 | 25.09 | 5.484e-07 | 0.9534 |
chr14:49405740 | rs12434210 | - | G>C | 42961 | 82597 | 20.49 | 5.991e-06 | 1.035 |
chr8:59634038 | rs11995052 | - | A>G | 4541 | 8213 | 20.29 | 6.661e-06 | 1.089 |
chr4:151673310 | rs115840608 | LRBA | T>C | 5109 | 9294 | 20.04 | 7.594e-06 | 1.083 |
chr1:9881112 | rs1619083 | CLSTN1 | C>T | 5918 | 10832 | 19.85 | 8.359e-06 | 1.077 |
chr12:23704140 | rs12049960 | SOX5 | G>A | 18262 | 34529 | 19.76 | 8.797e-06 | 1.045 |
chr12:4327247 | rs4766219 | - | G>A | 48174 | 92938 | 19.3 | 1.116e-05 | 1.033 |
chr18:74287847 | rs72974030 | - | A>G | 20281 | 41197 | 19.3 | 1.115e-05 | 0.9592 |
chr7:26134253 | rs4722567 | - | T>C | 23876 | 48346 | 18.86 | 1.404e-05 | 0.9618 |
chr1:17939373 | rs34264132 | ARHGEF10L | C>T | 2887 | 6238 | 18.77 | 1.474e-05 | 0.9059 |
chr12:23688755 | rs12227654 | SOX5 | G>A | 22659 | 43105 | 18.75 | 1.489e-05 | 1.041 |
chr12:51575615 | rs11169744 | - | T>G | 14240 | 29143 | 18.65 | 1.571e-05 | 0.9538 |
chr4:151340224 | rs116557628 | LRBA | T>C | 2448 | 4317 | 18.4 | 1.788e-05 | 1.116 |
chr1:238918722 | rs10925754 | - | C>T | 30796 | 62013 | 18.14 | 2.051e-05 | 0.9657 |
chr12:23729855 | rs12229765 | SOX5 | G>A | 18977 | 35984 | 17.96 | 2.259e-05 | 1.043 |
chr3:138608009 | rs9820131 | - | T>G | 54282 | 108266 | 17.66 | 2.636e-05 | 0.9696 |
chr4:8619349 | rs77962286 | GPR78 | G>A | 1521 | 3395 | 17.6 | 2.728e-05 | 0.8779 |
chr25:154986418 | rs142918084 | - | C>G | 3888 | 7032 | 17.55 | 2.792e-05 | 1.089 |
chr3:115155199 | rs12634166 | - | T>C | 7493 | 13893 | 17.43 | 2.985e-05 | 1.064 |
chr16:8714542 | rs118148228 | - | T>C | 3049 | 5454 | 17.43 | 2.975e-05 | 1.1 |