Statistics
| Case | Control |
|---|---|
| 698 | 459496 |
Top SNP Information
| Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
|---|---|---|---|---|---|---|---|---|
| chr5:33951693 | rs16891982 | SLC45A2 | G>C | 260 | 66798 | 201.5 | 1.007e-45 | 2.527 |
| chr5:33958959 | rs28777 | SLC45A2 | A>C | 224 | 56768 | 178.4 | 1.098e-40 | 2.529 |
| chr5:33955673 | rs35391 | SLC45A2 | C>T | 170 | 40810 | 151.6 | 7.707e-35 | 2.616 |
| chr5:33955326 | rs35390 | SLC45A2 | A>C | 170 | 40977 | 149.9 | 1.829e-34 | 2.602 |
| chr5:33951116 | rs35397 | SLC45A2 | T>G | 274 | 89834 | 106.0 | 7.194e-25 | 1.954 |
| chr2:2302037 | rs2385135 | MYT1L | T>C | 57 | 10062 | 93.58 | 3.908e-22 | 3.417 |
| chr20:2794688 | rs6515745 | - | A>G | 82 | 18408 | 83.11 | 7.758e-20 | 2.701 |
| chr15:48426484 | rs1426654 | SLC24A5 | A>G | 108 | 27418 | 82.64 | 9.838e-20 | 2.406 |
| chr26:10400 | Affx-89025669 | - | C>T | 46 | 7771 | 81.95 | 1.397e-19 | 3.621 |
| chr16:29035406 | rs74014848 | - | A>G | 90 | 21391 | 80.33 | 3.163e-19 | 2.557 |
| chr23:102201216 | rs725570 | - | A>G | 80 | 18890 | 80.33 | 3.161e-19 | 2.71 |
| chr23:19215613 | rs5955734 | - | C>G | 110 | 29915 | 79.79 | 4.156e-19 | 2.38 |
| chr12:80014907 | Affx-8530235 | PAWR | A>C | 118 | 31572 | 79.4 | 5.066e-19 | 2.291 |
| chr10:113850019 | rs4918711 | - | T>C | 288 | 103557 | 78.87 | 6.619e-19 | 1.766 |
| chr12:80036550 | rs8176841 | PAWR | G>A | 110 | 28806 | 78.11 | 9.766e-19 | 2.335 |
| chr3:149925742 | rs7629443 | - | T>C | 86 | 20296 | 78.05 | 1.003e-18 | 2.573 |
| chr12:80084463 | rs872455 | PAWR | T>C | 115 | 30816 | 76.9 | 1.795e-18 | 2.283 |
| chr5:142534068 | rs76832821 | ARHGAP26 | A>G | 52 | 9837 | 74.7 | 5.471e-18 | 3.176 |
| chr23:128718936 | rs2362937 | OCRL | T>C | 81 | 19870 | 74.32 | 6.646e-18 | 2.602 |
| chr23:145280054 | rs5965691 | - | G>A | 70 | 16188 | 73.12 | 1.218e-17 | 2.749 |
| chr18:57000469 | rs2298711 | LMAN1 | T>A | 255 | 124929 | 26.28 | 2.958e-07 | 1.428 |
| chr14:37148962 | rs1884213 | SLC25A21 | T>C | 764 | 447929 | 23.99 | 9.673e-07 | 1.306 |
| chr4:2034682 | rs55891502 | NELFA | G>A | 47 | 15511 | 23.61 | 1.181e-06 | 2.028 |
| chr5:2308256 | rs77521253 | - | G>A | 56 | 19628 | 23.37 | 1.335e-06 | 1.913 |
| chr23:128039002 | rs190847911 | - | C>T | 33 | 10196 | 21.85 | 2.941e-06 | 2.24 |
| chr1:18873836 | rs2816037 | - | C>T | 524 | 401303 | 21.21 | 4.113e-06 | 0.7754 |
| chr3:103417465 | rs115850506 | - | C>T | 57 | 20764 | 20.91 | 4.82e-06 | 1.84 |
| chr3:155447225 | rs112039981 | PLCH1 | G>C | 72 | 28040 | 20.76 | 5.218e-06 | 1.725 |
| chr4:107956446 | rs73837553 | DKK2 | A>G | 103 | 44400 | 20.61 | 5.619e-06 | 1.587 |
| chr9:118287019 | rs117973284 | - | T>C | 44 | 14850 | 20.5 | 5.963e-06 | 1.977 |
| chr6:169397801 | rs73048552 | - | G>A | 117 | 113028 | 19.94 | 7.983e-06 | 0.6516 |
| chr14:30873210 | rs55801676 | - | T>C | 130 | 122492 | 19.8 | 8.59e-06 | 0.6655 |
| chr4:83639461 | rs10025210 | SCD5 | C>T | 202 | 99031 | 19.34 | 1.094e-05 | 1.396 |
| chr23:32034270 | rs1293906 | DMD | C>T | 219 | 113792 | 19.1 | 1.24e-05 | 1.393 |
| chr14:101807999 | rs72704980 | - | G>A | 51 | 18537 | 18.87 | 1.402e-05 | 1.842 |
| chr2:210834736 | rs35262014 | UNC80 | G>A | 48 | 17181 | 18.64 | 1.578e-05 | 1.868 |
| chr2:883107 | rs77822585 | - | T>C | 50 | 18142 | 18.51 | 1.693e-05 | 1.842 |
| chr2:41018544 | rs114648456 | - | G>T | 61 | 23490 | 18.43 | 1.758e-05 | 1.743 |
| chr17:56048642 | rs17762434 | - | T>G | 85 | 86532 | 18.06 | 2.137e-05 | 0.624 |
| chr7:151143936 | rs73154836 | - | C>G | 121 | 55314 | 17.79 | 2.467e-05 | 1.491 |
| Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
|---|---|---|---|---|---|---|---|---|
| chr23:128039002 | rs190847911 | - | C>T | 33 | 32 | 22.39 | 2.222e-06 | 3.093 |
| chr4:83639461 | rs10025210 | SCD5 | C>T | 202 | 384 | 22.04 | 2.672e-06 | 1.545 |
| chr4:107956446 | rs73837553 | DKK2 | A>G | 103 | 166 | 21.91 | 2.859e-06 | 1.82 |
| chr4:43596834 | rs76236699 | - | T>C | 34 | 32 | 21.81 | 3.01e-06 | 3.019 |
| chr3:103417465 | rs115850506 | - | C>T | 57 | 73 | 21.02 | 4.551e-06 | 2.233 |
| chr8:117195694 | rs16888113 | - | A>G | 154 | 284 | 19.09 | 1.244e-05 | 1.58 |
| chr15:91647440 | rs2023713 | SV2B | G>T | 660 | 1585 | 19.02 | 1.294e-05 | 1.315 |
| chr1:212476651 | rs34447409 | PPP2R5A | G>A | 238 | 881 | 18.93 | 1.353e-05 | 0.7042 |
| chr18:57000469 | rs2298711 | LMAN1 | T>A | 255 | 523 | 18.48 | 1.715e-05 | 1.435 |
| chr3:149053135 | rs79466891 | - | T>C | 50 | 64 | 18.45 | 1.742e-05 | 2.23 |
| chr4:43496308 | rs17596755 | - | T>C | 33 | 34 | 18.41 | 1.781e-05 | 2.759 |
| chr14:37148962 | rs1884213 | SLC25A21 | T>C | 764 | 1894 | 18.16 | 2.03e-05 | 1.31 |
| chr8:33175607 | rs13250565 | - | T>C | 75 | 114 | 17.97 | 2.24e-05 | 1.887 |
| chr8:33178687 | rs16880728 | - | C>T | 76 | 116 | 17.97 | 2.241e-05 | 1.879 |
| chr1:232537690 | rs72757307 | SIPA1L2 | A>G | 61 | 299 | 17.82 | 2.433e-05 | 0.5487 |
| chr15:91645528 | rs11634420 | SV2B | C>T | 524 | 1724 | 17.64 | 2.672e-05 | 0.7644 |
| chr11:59010486 | rs75842589 | - | C>T | 40 | 47 | 17.62 | 2.697e-05 | 2.423 |
| chr3:134111928 | rs62269485 | - | C>T | 65 | 95 | 17.3 | 3.198e-05 | 1.956 |
| chr13:93216205 | rs117792154 | GPC5 | C>T | 26 | 24 | 17.23 | 3.32e-05 | 3.077 |
| chr22:24123727 | rs28363665 | MMP11 | G>A | 26 | 24 | 17.18 | 3.407e-05 | 3.072 |
Associated Diseases ⓘ
| ID | Name | Top Correlation |
|---|
| ID | Name | Top Correlation |
|---|---|---|
| ICD-10: H663 | Other chronic suppurative otitis media | 0/20 |
| ICD-10: N130 | Hydronephrosis with ureteropelvic junction obstruction | 0/20 |