0000811

Case	Control
67838	392356

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds ratio
chr1:236085940	rs12038310	-	C>T	1851	13425	81.36	1.885e-19	0.7988
chr15:48426484	rs1426654	SLC24A5	A>G	3522	24004	80.14	3.492e-19	0.8492
chr20:19214390	rs6136658	SLC24A3	G>A	1649	12026	75.88	3.014e-18	0.7948
chr6:93667780	rs9363020	-	G>A	1453	10538	63.49	1.614e-15	0.7996
chr17:14424508	rs80090021	-	C>A	1313	9625	62.97	2.104e-15	0.7913
chr6:170242949	rs9396958	-	T>C	2013	14101	62.5	2.668e-15	0.8274
chr5:33951693	rs16891982	SLC45A2	G>C	9149	57909	61.45	4.541e-15	0.9129
chr2:211717706	rs12995612	-	C>G	2068	14404	60.21	8.525e-15	0.8323
chr5:33958959	rs28777	SLC45A2	A>C	7730	49262	60.06	9.218e-15	0.9071
chr11:44843134	rs11038167	TSPAN18	A>C	1255	9194	59.98	9.59e-15	0.7917
chr2:26113913	rs78404020	-	A>G	1709	12108	59.61	1.155e-14	0.8184
chr2:3313043	rs73133173	EIPR1	A>C	1798	12665	59.06	1.532e-14	0.8231
chr6:170602429	rs17860704	DLL1	T>C	1435	10283	55.93	7.512e-14	0.8094
chr6:22050187	rs1736507	-	C>A	1816	12697	55.87	7.759e-14	0.8282
chr15:48392165	rs1834640	-	A>G	4180	27444	55.56	9.087e-14	0.882
chr20:2315543	rs6132532	AL121899.2	A>G	6705	42829	54.28	1.738e-13	0.9056
chr5:33951116	rs35397	SLC45A2	T>G	12489	77619	53.65	2.396e-13	0.9287
chr10:108672251	rs1572457	SORCS1	C>T	1441	10277	53.63	2.426e-13	0.8133
chr1:206665837	rs11118256	IKBKE	G>A	1260	9100	52.74	3.801e-13	0.8034
chr1:29783282	rs6676357	-	T>C	1222	8832	51.67	6.576e-13	0.8026
chr25:2644302	rs1136470	-	C>T	17850	107964	33.74	6.305e-09	0.9508
chr6:396321	rs12203592	IRF4	C>T	30112	168803	30.81	2.848e-08	1.04
chr15:74716174	rs11856835	SEMA7A	G>A	68229	388531	28.08	1.164e-07	1.032
chr17:2092064	rs11078856	SMG6	G>A	43062	243520	27.27	1.767e-07	1.034
chr6:14719496	rs17119	-	A>G	25625	153037	26.97	2.063e-07	0.9617
chr5:4096237	rs1187477	-	C>T	29199	164049	26.19	3.096e-07	1.037
chr6:14724910	rs13197778	-	T>C	24671	147474	26.11	3.221e-07	0.9618
chr17:2091765	rs903160	SMG6	C>T	43454	246036	24.91	6.013e-07	1.032
chr6:14716037	rs1267495	-	T>C	25526	152137	24.54	7.294e-07	0.9635
chr6:421281	rs62389423	-	G>A	24497	137368	24.28	8.312e-07	1.038
chr2:192668645	rs4853639	-	T>C	13917	77104	24.19	8.717e-07	1.049
chr2:204836598	rs1075547	-	C>T	53530	304165	24.07	9.289e-07	1.03
chr6:14733033	rs62389638	-	T>C	24646	146991	24.02	9.559e-07	0.9634
chr22:45703075	rs226499	-	G>A	50230	295913	23.81	1.062e-06	0.9707
chr12:123921264	rs28434767	-	G>T	37536	222077	23.49	1.256e-06	0.9687
chr20:21253368	rs78910017	-	G>A	2984	18966	23.46	1.273e-06	0.9081
chr22:45718743	rs7290139	FAM118A	G>A	50978	300344	23.34	1.355e-06	0.9711
chr10:22729783	rs7921007	SPAG6	C>A	4861	30243	23.23	1.439e-06	0.927
chr5:127548955	rs36694	-	A>C	35655	201353	23.08	1.552e-06	1.033
chr17:2017079	rs2760743	SMG6	C>A	40531	229334	23.06	1.573e-06	1.031

Location

SNP

Gene

Ref>Alt

Alt in Case

Alt in Control

Chi-square

P-value

Odds ratio

chr1:236085940

rs12038310

-

C>T

1851

13425

81.36

1.885e-19

0.7988

chr15:48426484

rs1426654

SLC24A5

A>G

3522

24004

80.14

3.492e-19

0.8492

chr20:19214390

rs6136658

SLC24A3

G>A

1649

12026

75.88

3.014e-18

0.7948

chr6:93667780

rs9363020

-

G>A

1453

10538

63.49

1.614e-15

0.7996

chr17:14424508

rs80090021

-

C>A

1313

9625

62.97

2.104e-15

0.7913

chr6:170242949

rs9396958

-

T>C

2013

14101

62.5

2.668e-15

0.8274

chr5:33951693

rs16891982

SLC45A2

G>C

9149

57909

61.45

4.541e-15

0.9129

chr2:211717706

rs12995612

-

C>G

2068

14404

60.21

8.525e-15

0.8323

chr5:33958959

rs28777

SLC45A2

A>C

7730

49262

60.06

9.218e-15

0.9071

chr11:44843134

rs11038167

TSPAN18

A>C

1255

9194

59.98

9.59e-15

0.7917

chr2:26113913

rs78404020

-

A>G

1709

12108

59.61

1.155e-14

0.8184

chr2:3313043

rs73133173

EIPR1

A>C

1798

12665

59.06

1.532e-14

0.8231

chr6:170602429

rs17860704

DLL1

T>C

1435

10283

55.93

7.512e-14

0.8094

chr6:22050187

rs1736507

-

C>A

1816

12697

55.87

7.759e-14

0.8282

chr15:48392165

rs1834640

-

A>G

4180

27444

55.56

9.087e-14

0.882

chr20:2315543

rs6132532

AL121899.2

A>G

6705

42829

54.28

1.738e-13

0.9056

chr5:33951116

rs35397

SLC45A2

T>G

12489

77619

53.65

2.396e-13

0.9287

chr10:108672251

rs1572457

SORCS1

C>T

1441

10277

53.63

2.426e-13

0.8133

chr1:206665837

rs11118256

IKBKE

G>A

1260

9100

52.74

3.801e-13

0.8034

chr1:29783282

rs6676357

-

T>C

1222

8832

51.67

6.576e-13

0.8026

chr25:2644302

rs1136470

-

C>T

17850

107964

33.74

6.305e-09

0.9508

chr6:396321

rs12203592

IRF4

C>T

30112

168803

30.81

2.848e-08

1.04

chr15:74716174

rs11856835

SEMA7A

G>A

68229

388531

28.08

1.164e-07

1.032

chr17:2092064

rs11078856

SMG6

G>A

43062

243520

27.27

1.767e-07

1.034

chr6:14719496

rs17119

-

A>G

25625

153037

26.97

2.063e-07

0.9617

chr5:4096237

rs1187477

-

C>T

29199

164049

26.19

3.096e-07

1.037

chr6:14724910

rs13197778

-

T>C

24671

147474

26.11

3.221e-07

0.9618

chr17:2091765

rs903160

SMG6

C>T

43454

246036

24.91

6.013e-07

1.032

chr6:14716037

rs1267495

-

T>C

25526

152137

24.54

7.294e-07

0.9635

chr6:421281

rs62389423

-

G>A

24497

137368

24.28

8.312e-07

1.038

chr2:192668645

rs4853639

-

T>C

13917

77104

24.19

8.717e-07

1.049

chr2:204836598

rs1075547

-

C>T

53530

304165

24.07

9.289e-07

1.03

chr6:14733033

rs62389638

-

T>C

24646

146991

24.02

9.559e-07

0.9634

chr22:45703075

rs226499

-

G>A

50230

295913

23.81

1.062e-06

0.9707

chr12:123921264

rs28434767

-

G>T

37536

222077

23.49

1.256e-06

0.9687

chr20:21253368

rs78910017

-

G>A

2984

18966

23.46

1.273e-06

0.9081

chr22:45718743

rs7290139

FAM118A

G>A

50978

300344

23.34

1.355e-06

0.9711

chr10:22729783

rs7921007

SPAG6

C>A

4861

30243

23.23

1.439e-06

0.927

chr5:127548955

rs36694

-

A>C

35655

201353

23.08

1.552e-06

1.033

chr17:2017079

rs2760743

SMG6

C>A

40531

229334

23.06

1.573e-06

1.031

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds ratio
chr15:48426484	rs1426654	SLC24A5	A>G	3522	6199	186.3	2.073e-42	0.7475
chr15:48392165	rs1834640	-	A>G	4180	6984	144.4	2.859e-33	0.7879
chr25:2692710	rs2259750	-	A>G	27377	33268	143.2	5.297e-33	1.115
chr1:159174683	rs2814778	ACKR1	T>C	2649	4626	130.9	2.585e-30	0.7552
chr13:72441665	rs3759505	-	C>T	2178	3880	124.4	6.892e-29	0.7407
chr2:226686177	rs7581591	-	T>C	2644	4587	123.6	1.014e-28	0.7607
chr5:147666044	rs7707813	-	T>C	2495	4357	123.3	1.18e-28	0.7553
chr25:2644302	rs1136470	-	C>T	18776	27489	122.4	1.861e-28	0.8933
chr5:147671850	rs7724380	-	G>A	2691	4638	119.7	7.302e-28	0.7655
chr25:2661556	rs73188900	-	A>C	2925	2935	117.7	2.016e-27	1.33
chr13:72463541	rs1460465	-	A>G	2070	3680	116.4	3.871e-27	0.7424
chr3:122328753	rs2173764	PARP15	A>G	1870	3367	114.8	8.506e-27	0.7333
chr2:237222746	rs60984264	-	G>A	2515	4343	113.6	1.572e-26	0.7642
chr9:127267689	rs3814134	NR5A1	A>G	3978	6497	110.7	6.721e-26	0.8067
chr19:42393286	rs717225	ARHGEF1	A>G	2965	5002	110.6	7.318e-26	0.7819
chr8:145639681	rs1871534	SLC39A4	G>C	2501	4306	110.2	8.795e-26	0.7666
chr17:58508582	rs8071181	C17orf64	G>A	2097	3687	108.5	2.08e-25	0.751
chr19:42392441	rs16975619	ARHGEF1	T>C	2683	4567	107.8	2.913e-25	0.7752
chr23:128718936	rs2362937	OCRL	T>C	2532	5114	106.4	6.101e-25	0.7762
chr25:155058865	rs73234550	-	G>A	4757	5143	106.2	6.614e-25	1.234
chr25:2644302	rs1136470	-	C>T	17850	26013	127.1	1.79e-29	0.8887
chr25:2692710	rs2259750	-	A>G	25433	30874	110.0	9.686e-26	1.104
chr25:2661556	rs73188900	-	A>C	2894	2911	107.4	3.683e-25	1.315
chr25:155058865	rs73234550	-	G>A	4706	5089	95.64	1.38e-22	1.222
chr25:2679949	rs311121	-	G>T	18897	26892	82.17	1.247e-19	0.9112
chr25:2645366	rs311083	-	C>G	50149	63295	78.3	8.845e-19	1.069
chr25:154998312	rs306885	-	T>G	63726	86601	73.63	9.422e-18	0.9398
chr25:154935282	rs112437556	-	C>T	4075	6267	62.9	2.173e-15	0.8503
chr25:155104608	rs5940618	-	G>A	27856	34681	60.05	9.255e-15	1.072
chr25:2676915	rs311115	-	G>C	9679	14015	57.99	2.628e-14	0.9007
chr25:2685254	rs311142	-	C>T	53316	67833	54.07	1.932e-13	1.056
chr25:2681878	rs73190930	-	A>G	16810	23685	53.71	2.325e-13	0.9239
chr25:154986418	rs142918084	-	C>G	4385	6641	53.43	2.68e-13	0.8651
chr23:154395148	rs113038688	-	C>T	2707	3546	50.6	1.134e-12	1.202
chr25:2677358	rs66607823	-	A>G	13566	19216	49.0	2.564e-12	0.9205
chr25:2669401	rs146821057	-	A>G	16982	23848	48.65	3.065e-12	0.9277
chr25:2676160	rs312232	-	C>T	29079	40071	48.15	3.956e-12	0.9413
chr25:155013081	rs146997510	-	T>A	3913	4430	48.05	4.16e-12	1.167
chr25:155085824	rs1969622	-	G>C	19018	23471	47.75	4.841e-12	1.075
chr25:155053713	rs28884873	-	G>A	21067	26151	45.28	1.707e-11	1.07

ID	Name	Top Correlation
ICD: C445	Skin of trunk	5/20
ICD: K621	Rectal polyp	5/20
ICD: L720	Epidermal cyst	1/20
ICD: L900	Lichen sclerosus et atrophicus	1/20

ID	Name	Top Correlation
ICD-10: A020	Salmonella gastro-enteritis	0/20
ICD-10: B24	Unspecified human immunodeficiency virus [HIV] disease	0/20
ICD-10: C210	Anus, unspecified	0/20
ICD-10: C459	Mesothelioma, unspecified	0/20
ICD-10: C519	Vulva, unspecified	0/20
ICD-10: C629	Testis, unspecified	0/20
ICD-10: C675	Bladder neck	0/20
ICD-10: D045	Skin of trunk	0/20
ICD-10: D071	Vulva	0/20
ICD-10: D235	Skin of trunk	0/20
ICD-10: D269	Uterus, unspecified	0/20
ICD-10: D280	Vulva	0/20
ICD-10: D801	Nonfamilial hypogammaglobulinaemia	0/20
ICD-10: E291	Testicular hypofunction	0/20
ICD-10: F412	Mixed anxiety and depressive disorder	0/20
ICD-10: G958	Other specified diseases of spinal cord	0/20
ICD-10: I861	Scrotal varices	0/20
ICD-10: K413	Unilateral or unspecified femoral hernia, with obstruction, without gangrene	0/20
ICD-10: K419	Unilateral or unspecified femoral hernia, without obstruction or gangrene	0/20
ICD-10: L732	Hidradenitis suppurativa	0/20
ICD-10: L980	Pyogenic granuloma	0/20
ICD-10: M170	Primary gonarthrosis, bilateral	0/20
ICD-10: M173	Other posttraumatic gonarthrosis	0/20
ICD-10: M179	Gonarthrosis, unspecified	0/20
ICD-10: N059	Unspecified	0/20
ICD-10: N210	Calculus in bladder	0/20
ICD-10: N300	Acute cystitis	0/20
ICD-10: N303	Trigonitis	0/20
ICD-10: N320	Bladder-neck obstruction	0/20
ICD-10: N321	Vesicointestinal fistula	0/20
ICD-10: N329	Bladder disorder, unspecified	0/20
ICD-10: N342	Other urethritis	0/20
ICD-10: N358	Other urethral stricture	0/20
ICD-10: N359	Urethral stricture, unspecified	0/20
ICD-10: N360	Urethral fistula	0/20
ICD-10: N362	Urethral caruncle	0/20
ICD-10: N368	Other specified disorders of urethra	0/20
ICD-10: N399	Disorder of urinary system, unspecified	0/20
ICD-10: N410	Acute prostatitis	0/20
ICD-10: N419	Inflammatory disease of prostate, unspecified	0/20
ICD-10: N420	Calculus of prostate	0/20
ICD-10: N428	Other specified disorders of prostate	0/20
ICD-10: N433	Hydrocele, unspecified	0/20
ICD-10: N459	Orchitis, epididymitis and epididymo-orchitis without abscess	0/20
ICD-10: N47	Redundant prepuce, phimosis and paraphimosis	0/20
ICD-10: N480	Leukoplakia of penis	0/20
ICD-10: N481	Balanoposthitis	0/20
ICD-10: N482	Other inflammatory disorders of penis	0/20
ICD-10: N484	Impotence of organic origin	0/20
ICD-10: N486	Balanitis xerotica obliterans	0/20
ICD-10: N488	Other specified disorders of penis	0/20
ICD-10: N489	Disorder of penis, unspecified	0/20
ICD-10: N492	Inflammatory disorders of scrotum	0/20
ICD-10: N500	Atrophy of testis	0/20
ICD-10: N600	Solitary cyst of breast	0/20
ICD-10: N649	Disorder of breast, unspecified	0/20
ICD-10: N72	Inflammatory disease of cervix uteri	0/20
ICD-10: N750	Cyst of Bartholin's gland	0/20
ICD-10: N751	Abscess of Bartholin's gland	0/20
ICD-10: N762	Acute vulvitis	0/20
ICD-10: N831	Corpus luteum cyst	0/20
ICD-10: N904	Leukoplakia of vulva	0/20
ICD-10: N907	Vulvar cyst	0/20
ICD-10: N908	Other specified noninflammatory disorders of vulva and perineum	0/20
ICD-10: N924	Excessive bleeding in the premenopausal period	0/20
ICD-10: N990	Postprocedural renal failure	0/20
ICD-10: O410	Oligohydramnios	0/20
ICD-10: Q513	Bicornate uterus	0/20
ICD-10: Q668	Other congenital deformities of feet	0/20
ICD-10: Q892	Congenital malformations of other endocrine glands	0/20
ICD-10: R208	Other and unspecified disturbances of skin sensation	0/20
ICD-10: R391	Other difficulties with micturition	0/20
ICD-10: R452	Unhappiness	0/20
ICD-10: R521	Chronic intractable pain	0/20
ICD-10: T68	Hypothermia	0/20

Abnormal external genitalia

0000811

Normal Case/Contol ^ⓘ

Sibling Case/Control ^ⓘ

Links

Statistics

Top SNP Information

Associated Diseases ^ⓘ

Abnormal external genitalia

0000811

Normal Case/Contol ⓘ

Sibling Case/Control ⓘ

Links

Statistics

Top SNP Information Show Normal Table Show Sibling SNP

Associated Diseases ⓘ Shared SNP diseases No shared SNP diseases

Normal Case/Contol ^ⓘ

Sibling Case/Control ^ⓘ

Top SNP Information

Associated Diseases ^ⓘ