Case | Control |
---|---|
32892 | 427302 |
A red eruption of the skin. [HPO:probinson]
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr6:396321 | rs12203592 | IRF4 | C>T | 15794 | 185411 | 250.1 | 2.509e-56 | 1.161 |
chr5:33951693 | rs16891982 | SLC45A2 | G>C | 3716 | 63342 | 249.7 | 3.015e-56 | 0.7607 |
chr5:33958959 | rs28777 | SLC45A2 | A>C | 3186 | 53806 | 196.8 | 1.043e-44 | 0.77 |
chr15:48426484 | rs1426654 | SLC24A5 | A>G | 1362 | 26164 | 191.0 | 1.921e-43 | 0.68 |
chr6:421281 | rs62389423 | - | G>A | 12803 | 151233 | 172.4 | 2.267e-39 | 1.143 |
chr5:33955326 | rs35390 | SLC45A2 | A>C | 2298 | 38849 | 140.8 | 1.78e-32 | 0.7722 |
chr15:48392165 | rs1834640 | - | A>G | 1701 | 29923 | 139.6 | 3.218e-32 | 0.7429 |
chr5:33955673 | rs35391 | SLC45A2 | C>T | 2290 | 38690 | 139.2 | 4.042e-32 | 0.773 |
chr5:33951116 | rs35397 | SLC45A2 | T>G | 5528 | 84580 | 127.0 | 1.865e-29 | 0.8495 |
chr2:171380643 | rs34020565 | MYO3B | T>G | 1318 | 23541 | 118.9 | 1.079e-27 | 0.7331 |
chr16:89986117 | Affx-35293625 | MC1R | C>T | 7503 | 87575 | 114.0 | 1.307e-26 | 1.146 |
chr6:170242949 | rs9396958 | - | T>C | 797 | 15317 | 110.3 | 8.354e-26 | 0.6828 |
chr6:136480972 | rs9483910 | PDE7B | C>T | 1132 | 20238 | 102.8 | 3.718e-24 | 0.7327 |
chr16:89818732 | rs12931267 | FANCA | C>G | 7387 | 86666 | 102.8 | 3.652e-24 | 1.139 |
chr16:28995057 | rs11859822 | SPNS1 | T>C | 1638 | 27798 | 102.5 | 4.297e-24 | 0.7711 |
chr19:42393286 | rs717225 | ARHGEF1 | A>G | 1169 | 20774 | 101.7 | 6.493e-24 | 0.7374 |
chr15:28356859 | rs1129038 | HERC2 | T>C | 16581 | 234356 | 101.5 | 7.112e-24 | 0.9112 |
chr16:28954860 | rs7203982 | - | T>C | 1637 | 27745 | 101.4 | 7.699e-24 | 0.7722 |
chr15:28365618 | rs12913832 | HERC2 | G>A | 16373 | 231509 | 101.0 | 9.406e-24 | 0.911 |
chr2:211717706 | rs12995612 | - | C>G | 838 | 15634 | 98.65 | 3.009e-23 | 0.7029 |
chr6:396321 | rs12203592 | IRF4 | C>T | 15634 | 183281 | 196.6 | 1.152e-44 | 1.143 |
chr6:421281 | rs62389423 | - | G>A | 12678 | 149187 | 139.7 | 3.165e-32 | 1.129 |
chr16:89986117 | Affx-35293625 | MC1R | C>T | 7440 | 86751 | 89.35 | 3.314e-21 | 1.129 |
chr16:89818732 | rs12931267 | FANCA | C>G | 7322 | 85773 | 80.52 | 2.871e-19 | 1.123 |
chr16:90048395 | rs45610233 | - | C>T | 6580 | 77076 | 71.86 | 2.31e-17 | 1.122 |
chr16:90067184 | rs73283869 | - | G>A | 6882 | 80844 | 71.28 | 3.099e-17 | 1.118 |
chr16:90067136 | rs78800020 | - | G>C | 6906 | 81287 | 68.73 | 1.131e-16 | 1.116 |
chr6:475489 | rs12210050 | - | C>T | 14053 | 171943 | 58.03 | 2.578e-14 | 1.078 |
chr16:89755903 | rs258322 | CDK10 | G>A | 8286 | 99283 | 56.84 | 4.731e-14 | 1.097 |
chr16:90093075 | rs77270200 | GAS8 | G>A | 7313 | 87137 | 56.44 | 5.78e-14 | 1.102 |
chr20:2290333 | rs214803 | AL121899.2 | A>C | 12506 | 152794 | 52.43 | 4.448e-13 | 1.078 |
chr11:89011046 | rs1393350 | TYR | G>A | 19792 | 245940 | 51.53 | 7.056e-13 | 1.065 |
chr11:89017961 | rs1126809 | TYR | G>A | 19913 | 247424 | 51.13 | 8.623e-13 | 1.066 |
chr2:202143928 | rs10931936 | CASP8 | C>T | 18388 | 228251 | 48.84 | 2.773e-12 | 1.065 |
chr2:202215492 | rs13014235 | FLACC1 | G>C | 26573 | 333863 | 47.24 | 6.291e-12 | 1.058 |
chr11:89005253 | rs1847134 | TYR | A>C | 22845 | 285813 | 45.84 | 1.286e-11 | 1.059 |
chr16:89687407 | rs2280374 | DPEP1 | C>T | 7069 | 84911 | 44.42 | 2.65e-11 | 1.091 |
chr1:17722363 | rs7538876 | PADI6 | G>A | 26240 | 330032 | 43.1 | 5.197e-11 | 1.056 |
chr1:17729903 | rs2526828 | - | G>A | 25690 | 322848 | 42.83 | 5.966e-11 | 1.056 |
chr1:17760098 | rs4920607 | RCC2 | A>G | 24754 | 310903 | 42.57 | 6.836e-11 | 1.056 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr6:396321 | rs12203592 | IRF4 | C>T | 15634 | 68457 | 128.0 | 1.14e-29 | 1.122 |
chr6:421281 | rs62389423 | - | G>A | 12678 | 55607 | 93.84 | 3.425e-22 | 1.112 |
chr16:89986117 | Affx-35293625 | MC1R | C>T | 7440 | 32241 | 65.11 | 7.071e-16 | 1.116 |
chr16:89818732 | rs12931267 | FANCA | C>G | 7322 | 31930 | 56.02 | 7.186e-14 | 1.108 |
chr16:90048395 | rs45610233 | - | C>T | 6580 | 28634 | 52.28 | 4.805e-13 | 1.11 |
chr16:90067184 | rs73283869 | - | G>A | 6882 | 30059 | 50.63 | 1.116e-12 | 1.106 |
chr16:90067136 | rs78800020 | - | G>C | 6906 | 30211 | 49.11 | 2.421e-12 | 1.104 |
chr20:2290333 | rs214803 | AL121899.2 | A>C | 12506 | 56346 | 43.29 | 4.725e-11 | 1.075 |
chr16:89755903 | rs258322 | CDK10 | G>A | 8286 | 36785 | 42.16 | 8.389e-11 | 1.088 |
chr6:32453194 | rs72849247 | - | T>C | 7981 | 35426 | 39.99 | 2.547e-10 | 1.087 |
chr6:32408044 | rs9268644 | HLA-DRA | C>A | 30254 | 140427 | 39.75 | 2.881e-10 | 1.056 |
chr2:202215492 | rs13014235 | FLACC1 | G>C | 26573 | 123034 | 38.74 | 4.834e-10 | 1.056 |
chr2:202143928 | rs10931936 | CASP8 | C>T | 18388 | 84215 | 38.62 | 5.16e-10 | 1.061 |
chr6:32504136 | rs66525318 | - | C>A | 8912 | 39831 | 38.52 | 5.416e-10 | 1.081 |
chr16:90093075 | rs77270200 | GAS8 | G>A | 7313 | 32416 | 38.07 | 6.83e-10 | 1.088 |
chr6:32409708 | rs17496549 | HLA-DRA | C>T | 8109 | 36128 | 37.14 | 1.098e-09 | 1.083 |
chr11:89011046 | rs1393350 | TYR | G>A | 19792 | 90903 | 37.08 | 1.132e-09 | 1.059 |
chr1:17760098 | rs4920607 | RCC2 | A>G | 24754 | 114450 | 36.57 | 1.475e-09 | 1.055 |
chr1:17729903 | rs2526828 | - | G>A | 25690 | 118867 | 36.55 | 1.491e-09 | 1.055 |
chr6:475489 | rs12210050 | - | C>T | 14053 | 63889 | 36.34 | 1.661e-09 | 1.065 |