Case | Control |
---|---|
965 | 459229 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr8:19805708 | rs1801177 | LPL | G>A | 70 | 17177 | 32.47 | 1.211e-08 | 1.976 |
chr6:28754817 | rs9257182 | - | C>A | 501 | 194837 | 25.88 | 3.627e-07 | 1.299 |
chr6:28792477 | rs209181 | - | G>A | 427 | 162613 | 25.69 | 4.014e-07 | 1.317 |
chr6:28769671 | rs2765220 | - | T>C | 449 | 173138 | 24.59 | 7.087e-07 | 1.303 |
chr3:45155614 | rs112097437 | CDCP1 | C>T | 117 | 35896 | 24.38 | 7.899e-07 | 1.595 |
chr4:165777992 | rs72695868 | - | C>T | 88 | 25252 | 23.81 | 1.062e-06 | 1.693 |
chr6:29337500 | rs6934993 | OR5V1 | A>G | 624 | 252652 | 22.6 | 1.992e-06 | 1.256 |
chr7:64404296 | rs12539512 | - | C>T | 116 | 83347 | 22.3 | 2.333e-06 | 0.638 |
chr6:28325201 | rs6921919 | ZKSCAN3 | C>G | 584 | 235147 | 21.62 | 3.328e-06 | 1.255 |
chr18:22100922 | rs79385303 | - | C>T | 92 | 27311 | 21.51 | 3.511e-06 | 1.634 |
chr2:222016671 | rs114548519 | - | T>C | 95 | 28434 | 21.4 | 3.728e-06 | 1.62 |
chr6:28325308 | rs6922111 | ZKSCAN3 | C>T | 582 | 235157 | 21.32 | 3.882e-06 | 1.254 |
chr6:29335661 | rs9257794 | OR5V1 | C>T | 616 | 251314 | 20.97 | 4.675e-06 | 1.247 |
chr16:47991323 | rs72802536 | - | C>T | 85 | 24882 | 20.8 | 5.108e-06 | 1.65 |
chr1:97961878 | rs115346130 | DPYD | C>T | 48 | 12063 | 20.49 | 5.983e-06 | 1.917 |
chr1:20883503 | rs7545658 | - | A>G | 546 | 219086 | 20.25 | 6.807e-06 | 1.254 |
chr10:113529438 | rs35349035 | - | G>C | 113 | 35600 | 20.17 | 7.086e-06 | 1.54 |
chr6:29821896 | rs2734980 | - | G>A | 623 | 254168 | 19.91 | 8.111e-06 | 1.239 |
chr18:42619378 | rs4890506 | SETBP1 | T>G | 414 | 161508 | 19.81 | 8.541e-06 | 1.277 |
chr8:19762732 | rs6586879 | LPL | C>T | 85 | 25285 | 19.73 | 8.922e-06 | 1.629 |
chr8:19762732 | rs6586879 | LPL | C>T | 67 | 16645 | 29.68 | 5.107e-08 | 1.947 |
chr8:19805708 | rs1801177 | LPL | G>A | 64 | 15783 | 29.05 | 7.042e-08 | 1.962 |
chr6:28325201 | rs6921919 | ZKSCAN3 | C>G | 556 | 221216 | 23.15 | 1.5e-06 | 1.273 |
chr4:165777992 | rs72695868 | - | C>T | 82 | 23299 | 22.91 | 1.695e-06 | 1.707 |
chr6:28325308 | rs6922111 | ZKSCAN3 | C>T | 554 | 221229 | 22.83 | 1.77e-06 | 1.272 |
chr18:22100922 | rs79385303 | - | C>T | 84 | 24097 | 22.44 | 2.165e-06 | 1.688 |
chr7:64404296 | rs12539512 | - | C>T | 106 | 77509 | 22.31 | 2.324e-06 | 0.6254 |
chr1:97961878 | rs115346130 | DPYD | C>T | 48 | 11900 | 21.29 | 3.942e-06 | 1.942 |
chr3:45155614 | rs112097437 | CDCP1 | C>T | 111 | 34612 | 21.23 | 4.069e-06 | 1.565 |
chr9:17293779 | rs645117 | CNTLN | G>A | 581 | 319411 | 21.18 | 4.19e-06 | 0.7921 |
chr18:42619378 | rs4890506 | SETBP1 | T>G | 384 | 147552 | 20.81 | 5.077e-06 | 1.297 |
chr6:28792477 | rs209181 | - | G>A | 403 | 155834 | 20.74 | 5.266e-06 | 1.29 |
chr10:113529438 | rs35349035 | - | G>C | 112 | 35041 | 20.53 | 5.868e-06 | 1.55 |
chr6:28769671 | rs2765220 | - | T>C | 424 | 166044 | 19.67 | 9.19e-06 | 1.276 |
chr6:28754817 | rs9257182 | - | C>A | 469 | 185954 | 19.53 | 9.928e-06 | 1.264 |
chr1:20883503 | rs7545658 | - | A>G | 500 | 198805 | 19.52 | 9.981e-06 | 1.259 |
chr6:29337500 | rs6934993 | OR5V1 | A>G | 591 | 240504 | 19.48 | 1.015e-05 | 1.243 |
chr2:222016671 | rs114548519 | - | T>C | 92 | 27942 | 19.28 | 1.126e-05 | 1.593 |
chr1:120169137 | rs4659222 | ZNF697 | C>A | 856 | 362458 | 19.15 | 1.207e-05 | 1.223 |
chr6:26598004 | rs4634439 | ABT1 | A>G | 318 | 120369 | 19.13 | 1.218e-05 | 1.307 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr8:19762732 | rs6586879 | LPL | C>T | 67 | 4689 | 28.93 | 7.511e-08 | 1.938 |
chr8:19805708 | rs1801177 | LPL | G>A | 64 | 4484 | 27.58 | 1.504e-07 | 1.935 |
chr3:45155614 | rs112097437 | CDCP1 | C>T | 111 | 9552 | 22.68 | 1.918e-06 | 1.591 |
chr4:165777992 | rs72695868 | - | C>T | 82 | 6585 | 21.98 | 2.754e-06 | 1.693 |
chr18:22100922 | rs79385303 | - | C>T | 84 | 6780 | 21.93 | 2.822e-06 | 1.682 |
chr7:64404296 | rs12539512 | - | C>T | 106 | 21453 | 20.86 | 4.948e-06 | 0.6345 |
chr1:97961878 | rs115346130 | DPYD | C>T | 48 | 3353 | 20.74 | 5.262e-06 | 1.932 |
chr9:17293779 | rs645117 | CNTLN | G>A | 581 | 89514 | 20.7 | 5.382e-06 | 0.7937 |
chr6:28325201 | rs6921919 | ZKSCAN3 | C>G | 556 | 62637 | 20.59 | 5.675e-06 | 1.257 |
chr6:28325308 | rs6922111 | ZKSCAN3 | C>T | 554 | 62609 | 20.39 | 6.318e-06 | 1.256 |
chr18:42619378 | rs4890506 | SETBP1 | T>G | 384 | 41448 | 20.31 | 6.572e-06 | 1.294 |
chr1:120169137 | rs4659222 | ZNF697 | C>A | 856 | 101308 | 19.82 | 8.511e-06 | 1.228 |
chr10:113529438 | rs35349035 | - | G>C | 112 | 9918 | 19.45 | 1.031e-05 | 1.535 |
chr9:132150995 | rs11789821 | - | T>C | 614 | 70580 | 19.22 | 1.165e-05 | 1.24 |
chr1:20883503 | rs7545658 | - | A>G | 500 | 55923 | 18.82 | 1.439e-05 | 1.255 |
chr19:2705763 | rs59593034 | - | G>A | 98 | 8515 | 18.71 | 1.519e-05 | 1.564 |
chr10:34468587 | rs12254714 | PARD3 | C>A | 123 | 11211 | 18.65 | 1.569e-05 | 1.495 |
chr2:222016671 | rs114548519 | - | T>C | 92 | 7888 | 18.53 | 1.675e-05 | 1.582 |
chr23:31747144 | rs17330048 | DMD | T>C | 87 | 7244 | 18.38 | 1.809e-05 | 1.603 |
chr5:155418126 | rs79375969 | SGCD | G>A | 85 | 7198 | 18.14 | 2.054e-05 | 1.601 |
ID | Name | Top Correlation |
---|
ID | Name | Top Correlation |
---|---|---|
ICD-10: H050 | Acute inflammation of orbit | 0/20 |
ICD-10: H46 | Optic neuritis | 0/20 |
ICD-10: H473 | Other disorders of optic disk | 0/20 |
ICD-10: H547 | Unspecified visual loss | 0/20 |