Case | Control |
---|---|
7233 | 452961 |
Infections of the skin that happen multiple times. [HPO:curators]
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr6:32191457 | rs375244 | NOTCH4 | G>A | 3252 | 222229 | 34.03 | 5.417e-09 | 0.8905 |
chr19:49211969 | rs676388 | - | C>T | 6981 | 455301 | 23.79 | 1.077e-06 | 0.9234 |
chr3:122356200 | rs2668334 | PARP15 | T>C | 3976 | 232071 | 23.44 | 1.289e-06 | 1.094 |
chr13:27066997 | rs2102070 | - | A>G | 2794 | 160672 | 22.86 | 1.74e-06 | 1.106 |
chr17:70534472 | rs880859 | - | C>T | 2878 | 194704 | 22.75 | 1.848e-06 | 0.9053 |
chr19:49206985 | rs602662 | FUT2 | A>G | 6960 | 453252 | 22.6 | 1.992e-06 | 0.9253 |
chr2:26113913 | rs78404020 | - | A>G | 149 | 13668 | 22.41 | 2.207e-06 | 0.6775 |
chr19:49209010 | rs503279 | FUT2 | C>T | 6962 | 453406 | 22.28 | 2.359e-06 | 0.9258 |
chr19:49207206 | rs485186 | FUT2 | G>A | 6960 | 452906 | 22.26 | 2.376e-06 | 0.9258 |
chr6:20422869 | rs62398861 | E2F3 | C>T | 1803 | 101415 | 21.7 | 3.187e-06 | 1.125 |
chr19:49206172 | rs516246 | FUT2 | T>C | 7386 | 479607 | 21.5 | 3.543e-06 | 0.9273 |
chr19:49206417 | rs492602 | FUT2 | G>A | 7387 | 478799 | 20.54 | 5.853e-06 | 0.9289 |
chr19:49208865 | rs504963 | FUT2 | A>G | 7000 | 454925 | 20.51 | 5.934e-06 | 0.9287 |
chr21:20354581 | rs450857 | - | G>A | 5618 | 367947 | 20.44 | 6.139e-06 | 0.9265 |
chr1:40761998 | rs111781530 | - | G>A | 406 | 31596 | 20.23 | 6.851e-06 | 0.7967 |
chr19:49206674 | rs601338 | FUT2 | A>G | 7383 | 478177 | 20.08 | 7.42e-06 | 0.9297 |
chr8:31947675 | rs4733108 | NRG1 | C>T | 4998 | 296044 | 20.07 | 7.451e-06 | 1.081 |
chr19:49206462 | rs681343 | FUT2 | T>C | 7390 | 478764 | 19.94 | 7.984e-06 | 0.9299 |
chr6:32193220 | rs2395106 | - | A>G | 5554 | 363553 | 19.89 | 8.192e-06 | 0.9273 |
chr1:179747873 | rs72708629 | FAM163A | T>G | 434 | 21914 | 19.74 | 8.873e-06 | 1.244 |
chr6:32191457 | rs375244 | NOTCH4 | G>A | 3016 | 205268 | 26.75 | 2.317e-07 | 0.8989 |
chr1:40739498 | rs77081740 | ZMPSTE24 | C>T | 190 | 16988 | 24.5 | 7.441e-07 | 0.6966 |
chr17:70534472 | rs880859 | - | C>T | 2781 | 188607 | 21.91 | 2.863e-06 | 0.9051 |
chr1:40761998 | rs111781530 | - | G>A | 386 | 30516 | 21.62 | 3.33e-06 | 0.786 |
chr1:40496200 | rs75743903 | - | T>C | 706 | 52402 | 21.46 | 3.621e-06 | 0.8355 |
chr6:20422869 | rs62398861 | E2F3 | C>T | 1753 | 98917 | 21.04 | 4.496e-06 | 1.125 |
chr17:77290798 | rs118165510 | RBFOX3 | C>T | 225 | 10538 | 18.99 | 1.313e-05 | 1.343 |
chr17:9162195 | rs117525535 | STX8 | T>G | 552 | 41461 | 18.91 | 1.371e-05 | 0.8272 |
chr1:11606556 | rs113054170 | - | C>T | 269 | 12938 | 18.73 | 1.507e-05 | 1.308 |
chr13:27066997 | rs2102070 | - | A>G | 2600 | 150675 | 18.71 | 1.52e-05 | 1.099 |
chr19:49211969 | rs676388 | - | C>T | 6468 | 421775 | 18.71 | 1.524e-05 | 0.9296 |
chr4:80559825 | rs77963696 | - | C>T | 583 | 30578 | 18.63 | 1.585e-05 | 1.202 |
chr8:31947675 | rs4733108 | NRG1 | C>T | 4585 | 272110 | 18.56 | 1.643e-05 | 1.081 |
chr4:44358412 | rs6447330 | KCTD8 | A>G | 2127 | 145233 | 18.48 | 1.714e-05 | 0.9033 |
chr18:72143063 | rs75738618 | - | C>T | 489 | 25247 | 18.45 | 1.743e-05 | 1.22 |
chr19:49206985 | rs602662 | FUT2 | A>G | 6444 | 419852 | 18.36 | 1.828e-05 | 0.9302 |
chr4:115971881 | rs17584238 | NDST4 | T>C | 3052 | 178236 | 18.24 | 1.949e-05 | 1.092 |
chr6:32184574 | rs384247 | NOTCH4 | G>A | 2392 | 162116 | 18.18 | 2.006e-05 | 0.9084 |
chr21:37037993 | rs75296604 | RUNX1 | G>A | 288 | 14028 | 18.18 | 2.005e-05 | 1.291 |
chr19:49209010 | rs503279 | FUT2 | C>T | 6459 | 420783 | 18.06 | 2.144e-05 | 0.9308 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr18:9536315 | rs14336 | RALBP1 | A>C | 258 | 1598 | 38.24 | 6.258e-10 | 1.515 |
chr1:173579034 | rs12065033 | AL139142.2 | C>T | 291 | 1885 | 34.34 | 4.639e-09 | 1.448 |
chr4:111516322 | rs113989538 | - | T>A | 246 | 1603 | 28.07 | 1.169e-07 | 1.439 |
chr10:5604955 | rs6601980 | - | T>C | 511 | 3735 | 27.62 | 1.478e-07 | 1.286 |
chr13:81905924 | rs7319533 | - | A>G | 275 | 1855 | 25.87 | 3.651e-07 | 1.391 |
chr1:159174683 | rs2814778 | ACKR1 | T>C | 343 | 2396 | 25.8 | 3.787e-07 | 1.344 |
chr13:58552574 | rs1436689 | - | T>C | 225 | 1466 | 25.78 | 3.833e-07 | 1.439 |
chr9:140957557 | rs11137360 | CACNA1B | A>G | 378 | 2687 | 25.07 | 5.533e-07 | 1.32 |
chr5:83128858 | rs7709612 | - | A>G | 212 | 1373 | 25.06 | 5.561e-07 | 1.447 |
chr1:179747873 | rs72708629 | FAM163A | T>G | 434 | 3157 | 24.31 | 8.192e-07 | 1.291 |
chr17:38692757 | rs11871009 | - | A>G | 222 | 1458 | 24.2 | 8.69e-07 | 1.426 |
chr9:117110112 | Affx-52344420 | AKNA | T>TG | 271 | 1842 | 24.19 | 8.718e-07 | 1.379 |
chr17:58508582 | rs8071181 | C17orf64 | G>A | 280 | 1919 | 23.83 | 1.053e-06 | 1.369 |
chr11:124763310 | rs56247780 | ROBO4 | C>T | 241 | 1612 | 23.76 | 1.09e-06 | 1.402 |
chr16:88321213 | rs7184400 | - | A>G | 240 | 1604 | 23.67 | 1.144e-06 | 1.402 |
chr2:236882049 | rs7597238 | AGAP1 | G>A | 533 | 3990 | 23.58 | 1.197e-06 | 1.255 |
chr22:42128461 | rs6002455 | MEI1 | T>A | 637 | 4867 | 23.54 | 1.22e-06 | 1.232 |
chr6:143406963 | rs9373372 | AIG1 | G>A | 273 | 1869 | 23.34 | 1.359e-06 | 1.37 |
chr17:70534472 | rs880859 | - | C>T | 2878 | 29195 | 23.12 | 1.524e-06 | 0.9008 |
chr21:20354581 | rs450857 | - | G>A | 5618 | 55241 | 22.89 | 1.719e-06 | 0.9192 |
chr17:77290798 | rs118165510 | RBFOX3 | C>T | 225 | 1514 | 22.45 | 2.152e-06 | 1.404 |
chr12:65040623 | rs79774071 | RASSF3 | G>A | 702 | 5486 | 22.39 | 2.23e-06 | 1.214 |
chr1:40739498 | rs77081740 | ZMPSTE24 | C>T | 190 | 2526 | 21.74 | 3.118e-06 | 0.7037 |
chr6:20422869 | rs62398861 | E2F3 | C>T | 1753 | 14787 | 20.85 | 4.972e-06 | 1.131 |
chr4:80559825 | rs77963696 | - | C>T | 583 | 4509 | 20.41 | 6.256e-06 | 1.225 |
chr17:70534472 | rs880859 | - | C>T | 2781 | 28302 | 19.95 | 7.938e-06 | 0.9057 |
chr8:31947675 | rs4733108 | NRG1 | C>T | 4585 | 40722 | 19.23 | 1.157e-05 | 1.086 |
chr1:40761998 | rs111781530 | - | G>A | 386 | 4557 | 19.17 | 1.193e-05 | 0.7907 |
chr1:40496200 | rs75743903 | - | T>C | 706 | 7842 | 19.16 | 1.205e-05 | 0.8385 |
chr15:38386306 | rs80213955 | - | C>T | 1175 | 9709 | 18.88 | 1.392e-05 | 1.15 |
chr3:68774944 | rs116545251 | - | G>A | 1259 | 10474 | 18.27 | 1.92e-05 | 1.143 |
chr4:52689754 | rs185530809 | - | A>G | 216 | 1495 | 18.01 | 2.197e-05 | 1.363 |
chr1:34149074 | rs3754063 | CSMD2 | G>A | 2566 | 26115 | 17.87 | 2.362e-05 | 0.908 |
chr6:106332553 | rs4075042 | - | T>C | 2278 | 19654 | 17.86 | 2.379e-05 | 1.107 |
chr6:169327120 | rs34744138 | - | C>T | 2589 | 26315 | 17.78 | 2.481e-05 | 0.9085 |
chr1:11606556 | rs113054170 | - | C>T | 269 | 1931 | 17.57 | 2.763e-05 | 1.316 |
chr21:37037993 | rs75296604 | RUNX1 | G>A | 288 | 2087 | 17.55 | 2.794e-05 | 1.304 |
chr1:2452569 | rs2985862 | PANK4 | C>T | 3475 | 34875 | 17.53 | 2.825e-05 | 0.918 |
chr11:83122673 | rs2510476 | - | A>C | 4291 | 42606 | 17.36 | 3.098e-05 | 0.9229 |
chr6:130922149 | rs9483149 | - | C>T | 1361 | 11438 | 17.22 | 3.321e-05 | 1.133 |
ID | Name | Top Correlation |
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