Case | Control |
---|---|
3142 | 457052 |
An accessory spleen is a round, iso-echogenic, homogenic and smooth structure and is seen as a normal variant mostly on the medial contour of the spleen, near the hilus or around the lower pole. This has no pathogenic relevance. [HPO:probinson]
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr3:38051211 | rs75495843 | PLCD1 | G>A | 269 | 28739 | 28.48 | 9.484e-08 | 1.394 |
chr14:75699566 | rs60699541 | - | C>G | 1494 | 194909 | 26.44 | 2.724e-07 | 1.164 |
chr5:1315660 | rs4975616 | - | A>G | 2577 | 408239 | 23.81 | 1.061e-06 | 0.8838 |
chr14:75572265 | rs96358 | ZC2HC1C | G>A | 2677 | 365894 | 23.28 | 1.404e-06 | 1.129 |
chr6:31800868 | rs2471980 | - | G>C | 2001 | 321403 | 22.95 | 1.66e-06 | 0.8791 |
chr14:75459633 | rs175016 | - | C>T | 3268 | 453702 | 22.32 | 2.302e-06 | 1.125 |
chr9:109538577 | rs7858184 | - | T>G | 987 | 126472 | 22.24 | 2.404e-06 | 1.177 |
chr1:213068127 | rs41301013 | FLVCR1 | C>T | 259 | 28613 | 21.92 | 2.845e-06 | 1.346 |
chr1:212852806 | rs12138919 | - | C>T | 251 | 27625 | 21.72 | 3.161e-06 | 1.35 |
chr5:85511883 | rs72772345 | - | T>C | 327 | 37513 | 21.36 | 3.807e-06 | 1.3 |
chr5:1322087 | rs401681 | CLPTM1L | C>T | 2685 | 422983 | 21.31 | 3.917e-06 | 0.8903 |
chr23:93056170 | rs62597059 | - | G>C | 854 | 110478 | 21.31 | 3.903e-06 | 1.19 |
chr6:16180557 | rs114862361 | - | T>C | 255 | 28267 | 21.3 | 3.924e-06 | 1.343 |
chr7:138317237 | rs28617498 | SVOPL | G>A | 59 | 15589 | 21.04 | 4.487e-06 | 0.553 |
chr3:66477828 | rs75178583 | LRIG1 | A>G | 518 | 62715 | 20.87 | 4.908e-06 | 1.233 |
chr5:85393840 | rs72772174 | - | A>G | 331 | 38087 | 20.87 | 4.916e-06 | 1.294 |
chr6:31783507 | rs1043618 | HSPA1A | G>C | 2364 | 374620 | 20.72 | 5.302e-06 | 0.8892 |
chr14:75532941 | rs7156328 | ACYP1 | T>C | 2916 | 456769 | 20.7 | 5.381e-06 | 0.8928 |
chr14:75455810 | rs175012 | - | A>C | 3208 | 445220 | 20.69 | 5.397e-06 | 1.119 |
chr14:75626042 | rs910316 | TMED10 | A>C | 2937 | 459092 | 20.69 | 5.411e-06 | 0.8931 |
chr14:75699566 | rs60699541 | - | C>G | 1442 | 185548 | 26.33 | 2.883e-07 | 1.167 |
chr5:1315660 | rs4975616 | - | A>G | 2452 | 384774 | 24.25 | 8.463e-07 | 0.8801 |
chr13:74871188 | rs9543560 | - | C>A | 1099 | 139303 | 23.94 | 9.95e-07 | 1.177 |
chr5:1322087 | rs401681 | CLPTM1L | C>T | 2566 | 400932 | 22.78 | 1.812e-06 | 0.8843 |
chr14:75572265 | rs96358 | ZC2HC1C | G>A | 2585 | 349061 | 22.73 | 1.866e-06 | 1.13 |
chr14:75459633 | rs175016 | - | C>T | 3127 | 428118 | 22.66 | 1.929e-06 | 1.129 |
chr3:38051211 | rs75495843 | PLCD1 | G>A | 253 | 27604 | 21.54 | 3.462e-06 | 1.347 |
chr23:93056170 | rs62597059 | - | G>C | 825 | 105163 | 21.43 | 3.67e-06 | 1.194 |
chr21:32497674 | rs2833283 | TIAM1 | A>C | 259 | 28378 | 21.17 | 4.208e-06 | 1.34 |
chr6:31800868 | rs2471980 | - | G>C | 1875 | 297247 | 21.03 | 4.525e-06 | 0.8809 |
chr10:122247789 | rs17705622 | PLPP4 | A>G | 549 | 66187 | 20.91 | 4.802e-06 | 1.227 |
chr4:108094603 | rs72667821 | DKK2 | C>T | 327 | 37125 | 20.85 | 4.963e-06 | 1.297 |
chr14:75532941 | rs7156328 | ACYP1 | T>C | 2802 | 434077 | 20.7 | 5.359e-06 | 0.8905 |
chr14:75626042 | rs910316 | TMED10 | A>C | 2811 | 434626 | 20.58 | 5.705e-06 | 0.8909 |
chr14:75538217 | rs3742778 | ZC2HC1C | G>T | 2782 | 428398 | 20.48 | 6.014e-06 | 0.8906 |
chr3:66477828 | rs75178583 | LRIG1 | A>G | 486 | 57914 | 20.33 | 6.506e-06 | 1.238 |
chr9:109538577 | rs7858184 | - | T>G | 956 | 121701 | 19.98 | 7.829e-06 | 1.171 |
chr5:85511883 | rs72772345 | - | T>C | 324 | 36991 | 19.96 | 7.918e-06 | 1.291 |
chr14:75590822 | rs8017642 | NEK9 | G>A | 2809 | 434322 | 19.87 | 8.302e-06 | 0.8926 |
chr14:75574087 | rs10146482 | ZC2HC1C | C>T | 2804 | 434402 | 19.84 | 8.429e-06 | 0.8927 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|
ID | Name | Top Correlation |
---|---|---|
ICD: L720 | Epidermal cyst | 10/20 |
ID | Name | Top Correlation |
---|---|---|
ICD-10: C252 | Tail of pancreas | 0/20 |
ICD-10: D759 | Disease of blood and blood-forming organs, unspecified | 0/20 |