Case | Control |
---|---|
16965 | 443229 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr15:78882925 | rs16969968 | CHRNA5 | G>A | 12033 | 301356 | 30.11 | 4.086e-08 | 1.064 |
chr15:78878541 | rs951266 | CHRNA5 | G>A | 12041 | 301535 | 29.86 | 4.648e-08 | 1.064 |
chr15:78857986 | rs55781567 | CHRNA5 | C>G | 12322 | 308993 | 29.71 | 5.017e-08 | 1.064 |
chr15:78868636 | rs72740964 | CHRNA5 | G>A | 11867 | 297408 | 29.66 | 5.137e-08 | 1.064 |
chr15:78896129 | rs1317286 | CHRNA3 | A>G | 12276 | 307811 | 28.7 | 8.468e-08 | 1.063 |
chr15:78894339 | rs1051730 | CHRNA3 | G>A | 12046 | 302096 | 28.17 | 1.112e-07 | 1.062 |
chr15:78873993 | rs7180002 | CHRNA5 | A>T | 12032 | 301456 | 28.17 | 1.109e-07 | 1.062 |
chr15:78814046 | rs10519203 | HYKK | A>G | 12428 | 311981 | 27.97 | 1.235e-07 | 1.062 |
chr15:78806023 | rs8034191 | HYKK | T>C | 12240 | 307177 | 27.51 | 1.567e-07 | 1.061 |
chr15:78857939 | rs55853698 | CHRNA5 | T>G | 12162 | 305248 | 26.94 | 2.097e-07 | 1.061 |
chr15:78783277 | rs11858836 | IREB2 | G>A | 11585 | 290810 | 25.7 | 3.991e-07 | 1.06 |
chr15:78907656 | rs6495308 | CHRNA3 | T>C | 8175 | 224250 | 25.0 | 5.728e-07 | 0.938 |
chr8:40417088 | rs74303370 | ZMAT4 | A>G | 670 | 21231 | 24.97 | 5.833e-07 | 0.8207 |
chr7:33802894 | rs79847151 | BBS9 | C>T | 3877 | 93825 | 23.88 | 1.023e-06 | 1.088 |
chr2:26113913 | rs78404020 | - | A>G | 402 | 13415 | 23.87 | 1.03e-06 | 0.7803 |
chr15:78867482 | rs17486278 | CHRNA5 | A>C | 12226 | 307692 | 23.81 | 1.066e-06 | 1.057 |
chr9:140055876 | rs10747050 | GRIN1 | A>G | 2672 | 63608 | 23.72 | 1.113e-06 | 1.105 |
chr15:78911672 | rs4243084 | CHRNA3 | G>C | 12320 | 310390 | 23.53 | 1.232e-06 | 1.056 |
chr2:135911422 | Affx-17900027 | RAB3GAP1 | T>C | 8486 | 232120 | 23.51 | 1.245e-06 | 0.9405 |
chr15:78826180 | rs931794 | HYKK | A>G | 12376 | 311652 | 23.5 | 1.25e-06 | 1.056 |
chr4:11427419 | rs10000547 | HS3ST1 | T>C | 6109 | 169824 | 26.85 | 2.195e-07 | 0.9281 |
chr15:78878541 | rs951266 | CHRNA5 | G>A | 11613 | 291459 | 26.53 | 2.599e-07 | 1.062 |
chr15:78882925 | rs16969968 | CHRNA5 | G>A | 11637 | 292307 | 25.98 | 3.456e-07 | 1.061 |
chr15:78867482 | rs17486278 | CHRNA5 | A>C | 11650 | 292571 | 25.94 | 3.52e-07 | 1.061 |
chr15:78868636 | rs72740964 | CHRNA5 | G>A | 11473 | 288393 | 25.69 | 4.001e-07 | 1.061 |
chr15:78873993 | rs7180002 | CHRNA5 | A>T | 11606 | 291379 | 25.34 | 4.795e-07 | 1.061 |
chr15:78894339 | rs1051730 | CHRNA3 | G>A | 11616 | 291964 | 24.95 | 5.873e-07 | 1.06 |
chr15:78896129 | rs1317286 | CHRNA3 | A>G | 11720 | 294563 | 24.94 | 5.919e-07 | 1.06 |
chr15:78857986 | rs55781567 | CHRNA5 | C>G | 11753 | 295622 | 24.79 | 6.402e-07 | 1.06 |
chr15:78911672 | rs4243084 | CHRNA3 | G>C | 11801 | 297072 | 24.28 | 8.31e-07 | 1.059 |
chr6:32431558 | rs41291798 | - | C>A | 2576 | 73981 | 24.27 | 8.371e-07 | 0.9024 |
chr5:27345941 | rs12187091 | - | G>A | 1051 | 31881 | 23.65 | 1.156e-06 | 0.8566 |
chr6:32209027 | rs382259 | - | T>C | 6692 | 184539 | 23.65 | 1.155e-06 | 0.9347 |
chr6:32210799 | rs419132 | - | A>G | 7013 | 192899 | 23.2 | 1.456e-06 | 0.9364 |
chr15:78857939 | rs55853698 | CHRNA5 | T>G | 11745 | 295698 | 22.91 | 1.697e-06 | 1.057 |
chr15:78814046 | rs10519203 | HYKK | A>G | 11795 | 297153 | 22.63 | 1.964e-06 | 1.057 |
chr15:78826180 | rs931794 | HYKK | A>G | 11786 | 296903 | 22.62 | 1.972e-06 | 1.057 |
chr15:78806023 | rs8034191 | HYKK | T>C | 11745 | 295784 | 22.59 | 2.01e-06 | 1.057 |
chr10:107763659 | rs61875573 | - | T>C | 7938 | 217313 | 22.45 | 2.162e-06 | 0.94 |
chr15:78898723 | rs12914385 | CHRNA3 | C>T | 13343 | 337510 | 22.27 | 2.368e-06 | 1.055 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr5:27345941 | rs12187091 | - | G>A | 1051 | 7528 | 25.6 | 4.192e-07 | 0.8444 |
chr5:27319815 | rs16896639 | - | T>G | 1079 | 7693 | 24.72 | 6.618e-07 | 0.8486 |
chr4:11427419 | rs10000547 | HS3ST1 | T>C | 6109 | 39525 | 24.32 | 8.152e-07 | 0.9277 |
chr8:40417088 | rs74303370 | ZMAT4 | A>G | 500 | 3808 | 22.82 | 1.775e-06 | 0.7957 |
chr1:247601357 | rs12143966 | NLRP3 | G>A | 14079 | 82900 | 21.53 | 3.476e-06 | 1.057 |
chr10:19385214 | rs77023505 | MALRD1 | G>A | 3511 | 19713 | 21.03 | 4.522e-06 | 1.093 |
chr15:35608732 | rs318360 | DPH6 | C>T | 12661 | 74381 | 20.89 | 4.876e-06 | 1.057 |
chr4:188966588 | rs34793765 | - | C>T | 422 | 3238 | 20.46 | 6.096e-06 | 0.7905 |
chr4:55509698 | rs73134049 | - | T>C | 2514 | 13917 | 20.09 | 7.388e-06 | 1.106 |
chr13:100526223 | rs35802185 | CLYBL | AC>A | 2868 | 15999 | 19.96 | 7.889e-06 | 1.099 |
chr14:89070559 | rs17188032 | ZC3H14 | T>C | 4428 | 28799 | 19.86 | 8.351e-06 | 0.9257 |
chr10:7639154 | rs17346945 | ITIH5 | C>G | 2247 | 12385 | 19.47 | 1.022e-05 | 1.11 |
chr1:218559032 | rs10863396 | TGFB2 | A>G | 9419 | 59725 | 19.33 | 1.098e-05 | 0.9442 |
chr4:183233693 | rs17073039 | TENM3 | T>C | 1984 | 10874 | 19.08 | 1.251e-05 | 1.116 |
chr3:68258080 | rs72924505 | TAFA1 | A>G | 3709 | 20958 | 18.97 | 1.326e-05 | 1.086 |
chr4:141683664 | rs923304 | - | A>C | 11274 | 66109 | 18.92 | 1.365e-05 | 1.056 |
chr10:114470504 | rs7919503 | VTI1A | A>G | 1298 | 8958 | 18.73 | 1.506e-05 | 0.8772 |
chr6:17675246 | rs2228375 | NUP153 | T>C | 10877 | 63739 | 18.46 | 1.737e-05 | 1.056 |
chr14:96716149 | rs2069608 | AL355102.2 | T>C | 6821 | 43619 | 18.44 | 1.758e-05 | 0.9393 |
chr15:78878541 | rs951266 | CHRNA5 | G>A | 11613 | 68206 | 18.18 | 2.01e-05 | 1.054 |