Case | Control |
---|---|
7321 | 452873 |
Respiratory difficulty as newborn. [HPO:probinson]
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr6:32020512 | rs17207895 | TNXB | T>C | 149 | 13940 | 26.62 | 2.477e-07 | 0.6545 |
chr22:22464997 | rs9611037 | - | G>A | 461 | 22579 | 25.55 | 4.321e-07 | 1.272 |
chr1:245223608 | rs74321246 | EFCAB2 | G>T | 385 | 18544 | 24.34 | 8.087e-07 | 1.292 |
chr20:46032690 | rs60838743 | - | T>C | 685 | 35316 | 23.46 | 1.273e-06 | 1.21 |
chr6:63977439 | rs72872987 | - | C>A | 261 | 12066 | 22.14 | 2.538e-06 | 1.344 |
chr1:154391882 | rs35717427 | IL6R | G>A | 2116 | 119151 | 21.36 | 3.808e-06 | 1.115 |
chr15:88088447 | rs4887298 | - | A>G | 2369 | 159901 | 21.16 | 4.23e-06 | 0.9018 |
chr4:170995313 | rs111912536 | AADAT | C>T | 1282 | 89705 | 20.89 | 4.854e-06 | 0.8745 |
chr12:123969017 | rs11497311 | RILPL1 | C>T | 697 | 36415 | 20.61 | 5.641e-06 | 1.194 |
chr15:27506185 | rs7165348 | GABRG3 | T>C | 5229 | 340641 | 20.61 | 5.62e-06 | 0.9252 |
chr4:186986933 | rs66818138 | - | C>T | 2541 | 170746 | 20.58 | 5.728e-06 | 0.9056 |
chr6:149531807 | rs9498249 | - | G>A | 1515 | 104664 | 20.24 | 6.819e-06 | 0.8847 |
chr18:52468141 | rs2311212 | RAB27B | T>C | 5295 | 344392 | 20.23 | 6.862e-06 | 0.9261 |
chr1:154351717 | rs1889313 | - | C>A | 2553 | 145711 | 19.77 | 8.716e-06 | 1.102 |
chr15:87928500 | rs9284311 | - | A>C | 3975 | 231430 | 19.67 | 9.18e-06 | 1.086 |
chr15:72678738 | rs11630430 | - | G>A | 650 | 35258 | 19.63 | 9.397e-06 | 1.197 |
chr3:181785515 | rs11706418 | - | G>A | 5620 | 331575 | 19.61 | 9.504e-06 | 1.077 |
chr10:79023182 | rs10509384 | KCNMA1 | A>G | 5171 | 304717 | 19.51 | 9.997e-06 | 1.08 |
chr3:195823788 | rs3887716 | - | C>T | 381 | 29479 | 19.42 | 1.049e-05 | 0.7949 |
chr4:170933517 | rs11729181 | MFAP3L | T>G | 1345 | 93296 | 19.07 | 1.263e-05 | 0.8821 |
chr1:245223608 | rs74321246 | EFCAB2 | G>T | 380 | 18226 | 24.67 | 6.803e-07 | 1.297 |
chr20:46032690 | rs60838743 | - | T>C | 626 | 31882 | 24.2 | 8.69e-07 | 1.225 |
chr1:154391882 | rs35717427 | IL6R | G>A | 1987 | 110912 | 23.53 | 1.227e-06 | 1.125 |
chr6:32020512 | rs17207895 | TNXB | T>C | 148 | 13474 | 23.35 | 1.351e-06 | 0.6711 |
chr6:63977439 | rs72872987 | - | C>A | 257 | 11840 | 22.22 | 2.437e-06 | 1.348 |
chr22:22464997 | rs9611037 | - | G>A | 447 | 22194 | 21.81 | 3.016e-06 | 1.254 |
chr15:27506185 | rs7165348 | GABRG3 | T>C | 4701 | 307243 | 20.97 | 4.656e-06 | 0.9215 |
chr12:2219111 | rs78657525 | CACNA1C | C>T | 272 | 22152 | 20.26 | 6.766e-06 | 0.7585 |
chr1:154351717 | rs1889313 | - | C>A | 2414 | 137231 | 20.18 | 7.062e-06 | 1.106 |
chr4:170995313 | rs111912536 | AADAT | C>T | 1264 | 88183 | 20.09 | 7.39e-06 | 0.8757 |
chr16:4257281 | rs9922726 | SRL | C>A | 6632 | 393542 | 19.34 | 1.096e-05 | 1.076 |
chr12:6537544 | rs7976678 | - | G>A | 5249 | 340996 | 19.16 | 1.199e-05 | 0.9267 |
chr14:33907747 | rs967440 | NPAS3 | A>G | 1888 | 128220 | 19.07 | 1.26e-05 | 0.8972 |
chr18:52468141 | rs2311212 | RAB27B | T>C | 5026 | 326509 | 19.03 | 1.286e-05 | 0.9263 |
chr16:57979908 | rs72782266 | CNGB1 | A>T | 904 | 48502 | 18.93 | 1.353e-05 | 1.163 |
chr15:88044080 | rs34297582 | - | A>G | 1875 | 127426 | 18.9 | 1.375e-05 | 0.8973 |
chr15:57613989 | rs117093862 | - | G>T | 210 | 9617 | 18.84 | 1.418e-05 | 1.355 |
chr10:79023182 | rs10509384 | KCNMA1 | A>G | 5031 | 296111 | 18.8 | 1.448e-05 | 1.08 |
chr4:170933517 | rs11729181 | MFAP3L | T>G | 1308 | 90639 | 18.55 | 1.652e-05 | 0.8819 |
chr12:130972823 | rs36075747 | RIMBP2 | G>A | 223 | 10332 | 18.53 | 1.672e-05 | 1.34 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr1:159962881 | rs114184667 | - | G>C | 1005 | 1586 | 23.15 | 1.495e-06 | 0.8176 |
chr16:34511429 | rs117482943 | - | A>C | 318 | 576 | 22.28 | 2.351e-06 | 0.7171 |
chr17:42650933 | rs4793125 | - | C>T | 4657 | 6566 | 22.27 | 2.365e-06 | 0.8955 |
chr18:74446157 | rs117928725 | - | G>A | 418 | 397 | 21.77 | 3.076e-06 | 1.391 |
chr10:84007998 | rs74549960 | NRG3 | T>G | 441 | 757 | 21.19 | 4.153e-06 | 0.756 |
chr17:2318177 | rs4790078 | METTL16 | G>A | 4454 | 6280 | 20.9 | 4.842e-06 | 0.8973 |
chr17:42657323 | rs6503386 | - | G>A | 4104 | 5803 | 20.67 | 5.463e-06 | 0.8956 |
chr12:127653229 | rs2662799 | - | C>A | 1854 | 2746 | 19.7 | 9.04e-06 | 0.8665 |
chr10:132678409 | rs75983965 | - | C>T | 525 | 874 | 19.64 | 9.338e-06 | 0.7795 |
chr20:17898737 | rs6075263 | - | C>A | 2222 | 3251 | 18.78 | 1.464e-05 | 0.8779 |
chr2:10215975 | rs4072564 | CYS1 | T>C | 4641 | 5658 | 18.43 | 1.763e-05 | 1.108 |
chr1:223850633 | rs12567248 | CAPN8 | C>G | 2883 | 3428 | 18.37 | 1.821e-05 | 1.128 |
chr9:76539750 | rs77183456 | - | A>C | 285 | 509 | 18.17 | 2.019e-05 | 0.7278 |
chr2:143554479 | rs4662570 | - | T>G | 7321 | 9143 | 17.99 | 2.227e-05 | 1.098 |
chr3:5085835 | rs11918600 | - | G>A | 3175 | 3800 | 17.69 | 2.602e-05 | 1.12 |
chr9:91396867 | rs55952720 | - | C>T | 663 | 1063 | 17.6 | 2.729e-05 | 0.8085 |
chr2:129865557 | rs72850262 | - | T>C | 361 | 620 | 17.31 | 3.18e-05 | 0.7569 |
chr9:76476521 | rs7870482 | - | T>C | 285 | 505 | 17.14 | 3.466e-05 | 0.7342 |
chr13:24979272 | rs117269945 | - | G>A | 398 | 673 | 17.06 | 3.621e-05 | 0.7676 |
chr14:78412194 | rs4020132 | - | C>T | 1274 | 1433 | 17.04 | 3.658e-05 | 1.18 |
ID | Name | Top Correlation |
---|---|---|
ICD: J189 | Pneumonia, unspecified | 5/20 |