Statistics
| Case | Control |
|---|---|
| 1269 | 458925 |
Top SNP Information
| Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
|---|---|---|---|---|---|---|---|---|
| chr13:57885104 | rs7981559 | - | C>T | 150 | 31220 | 42.47 | 7.161e-11 | 1.719 |
| chr12:56593900 | rs10876877 | - | A>G | 58 | 9301 | 37.25 | 1.042e-09 | 2.208 |
| chr8:145639681 | rs1871534 | SLC39A4 | G>C | 95 | 18050 | 36.64 | 1.418e-09 | 1.865 |
| chr15:45556163 | rs8023604 | SLC28A2 | T>C | 73 | 12838 | 35.95 | 2.025e-09 | 2.011 |
| chr2:66725070 | rs12995572 | MEIS1 | G>C | 128 | 27023 | 34.11 | 5.201e-09 | 1.688 |
| chr3:188327555 | rs7645635 | LPP | T>C | 78 | 14298 | 33.76 | 6.24e-09 | 1.929 |
| chr23:148151708 | Affx-34694529 | - | A>C | 61 | 8790 | 33.64 | 6.638e-09 | 2.091 |
| chr5:33951693 | rs16891982 | SLC45A2 | G>C | 267 | 66791 | 32.12 | 1.45e-08 | 1.438 |
| chr10:114925758 | rs1056877 | TCF7L2 | T>C | 69 | 12382 | 31.94 | 1.59e-08 | 1.97 |
| chr8:10557760 | rs57041981 | RP1L1 | A>G | 86 | 16562 | 31.69 | 1.807e-08 | 1.838 |
| chr10:122079463 | rs7084556 | - | A>G | 841 | 248276 | 31.45 | 2.051e-08 | 1.26 |
| chr15:94867507 | rs6497200 | MCTP2 | T>C | 117 | 24576 | 31.4 | 2.096e-08 | 1.69 |
| chr12:56722060 | rs1918496 | PAN2 | G>T | 65 | 11552 | 31.22 | 2.301e-08 | 1.993 |
| chr23:17746244 | rs3747295 | NHS | T>C | 156 | 30030 | 31.13 | 2.413e-08 | 1.581 |
| chr4:38110699 | rs16994230 | TBC1D1 | T>C | 69 | 12496 | 30.98 | 2.601e-08 | 1.95 |
| chr12:124330542 | rs7969937 | DNAH10 | C>A | 70 | 12765 | 30.84 | 2.801e-08 | 1.939 |
| chr5:33958959 | rs28777 | SLC45A2 | A>C | 231 | 56761 | 30.59 | 3.186e-08 | 1.46 |
| chr9:117110112 | Affx-52344420 | AKNA | T>TG | 77 | 14502 | 30.45 | 3.427e-08 | 1.876 |
| chr23:19209307 | rs960190 | - | T>C | 135 | 25346 | 30.12 | 4.071e-08 | 1.619 |
| chr4:10447848 | rs10021506 | ZNF518B | T>G | 61 | 10718 | 30.05 | 4.205e-08 | 2.009 |
| chr5:115947009 | Affx-25440387 | - | A>C | 98 | 22542 | 20.89 | 4.868e-06 | 1.596 |
| chr10:122079463 | rs7084556 | - | A>G | 697 | 216783 | 20.49 | 6.006e-06 | 1.223 |
| chr8:38329982 | rs72630661 | - | C>T | 65 | 13627 | 19.96 | 7.9e-06 | 1.743 |
| chr21:38528987 | rs62223645 | TTC3 | G>A | 170 | 44054 | 19.9 | 8.181e-06 | 1.423 |
| chr3:169311535 | rs78616784 | MECOM | G>A | 102 | 23960 | 19.63 | 9.422e-06 | 1.56 |
| chr25:1916283 | rs141412044 | - | C>T | 77 | 17002 | 19.45 | 1.031e-05 | 1.659 |
| chr10:78522700 | rs7908014 | - | G>A | 151 | 38639 | 19.17 | 1.196e-05 | 1.442 |
| chr12:9479498 | rs76009523 | - | A>C | 435 | 129703 | 19.07 | 1.257e-05 | 1.259 |
| chr15:88304832 | rs4435232 | - | C>T | 792 | 250518 | 18.93 | 1.356e-05 | 1.205 |
| chr5:147898148 | rs74795771 | HTR4 | A>C | 82 | 18600 | 18.43 | 1.76e-05 | 1.614 |
| chr16:86077637 | rs4843335 | - | G>A | 211 | 57336 | 18.32 | 1.865e-05 | 1.36 |
| chr9:29512612 | rs115238155 | - | A>C | 84 | 19198 | 18.24 | 1.952e-05 | 1.601 |
| chr5:88188300 | rs79532317 | MEF2C | C>A | 75 | 16714 | 18.21 | 1.982e-05 | 1.643 |
| chr2:73762385 | rs34032338 | ALMS1 | G>A | 142 | 36475 | 18.19 | 1.999e-05 | 1.445 |
| chr13:23598201 | rs9510527 | - | G>A | 584 | 179872 | 18.16 | 2.028e-05 | 1.223 |
| chr2:17014726 | rs35284680 | - | C>A | 215 | 58524 | 18.14 | 2.057e-05 | 1.354 |
| chr22:36672276 | rs136187 | - | C>A | 845 | 342850 | 18.05 | 2.152e-05 | 0.8361 |
| chr19:17118433 | rs11666377 | CPAMD8 | C>T | 456 | 137245 | 17.88 | 2.351e-05 | 1.244 |
| chr15:25962873 | rs17667563 | ATP10A | G>A | 540 | 165117 | 17.83 | 2.418e-05 | 1.227 |
| chr19:17113147 | rs3745345 | CPAMD8 | A>G | 460 | 139119 | 17.61 | 2.711e-05 | 1.241 |
| Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
|---|---|---|---|---|---|---|---|---|
| chr5:115947009 | Affx-25440387 | - | A>C | 98 | 7613 | 21.17 | 4.211e-06 | 1.604 |
| chr8:38329982 | rs72630661 | - | C>T | 65 | 4582 | 20.48 | 6.031e-06 | 1.76 |
| chr21:38528987 | rs62223645 | TTC3 | G>A | 170 | 14938 | 19.86 | 8.311e-06 | 1.425 |
| chr15:88304832 | rs4435232 | - | C>T | 792 | 84716 | 19.84 | 8.415e-06 | 1.211 |
| chr25:1916283 | rs141412044 | - | C>T | 77 | 5747 | 19.6 | 9.533e-06 | 1.666 |
| chr10:122079463 | rs7084556 | - | A>G | 697 | 73871 | 19.27 | 1.134e-05 | 1.216 |
| chr12:9479498 | rs76009523 | - | A>C | 435 | 43981 | 19.15 | 1.21e-05 | 1.26 |
| chr16:86077637 | rs4843335 | - | G>A | 211 | 19338 | 19.01 | 1.303e-05 | 1.369 |
| chr3:169311535 | rs78616784 | MECOM | G>A | 102 | 8205 | 18.67 | 1.556e-05 | 1.546 |
| chr2:17014726 | rs35284680 | - | C>A | 215 | 19760 | 18.66 | 1.559e-05 | 1.361 |
| chr5:147898148 | rs74795771 | HTR4 | A>C | 82 | 6294 | 18.51 | 1.692e-05 | 1.618 |
| chr8:132947985 | rs4132987 | EFR3A | G>A | 61 | 4354 | 18.36 | 1.828e-05 | 1.737 |
| chr13:23598201 | rs9510527 | - | G>A | 584 | 61015 | 18.12 | 2.071e-05 | 1.223 |
| chr10:78522700 | rs7908014 | - | G>A | 151 | 13228 | 18.09 | 2.11e-05 | 1.429 |
| chr15:25962873 | rs17667563 | ATP10A | G>A | 540 | 55947 | 18.07 | 2.134e-05 | 1.23 |
| chr2:73762385 | rs34032338 | ALMS1 | G>A | 142 | 12366 | 18.03 | 2.17e-05 | 1.444 |
| chr19:17118433 | rs11666377 | CPAMD8 | C>T | 456 | 46532 | 17.98 | 2.227e-05 | 1.246 |
| chr9:29512612 | rs115238155 | - | A>C | 84 | 6529 | 17.92 | 2.3e-05 | 1.598 |
| chr5:88188300 | rs79532317 | MEF2C | C>A | 75 | 5687 | 17.84 | 2.408e-05 | 1.638 |
| chr10:70804338 | rs28602922 | - | T>G | 194 | 17875 | 17.7 | 2.585e-05 | 1.37 |
Associated Diseases ⓘ
| ID | Name | Top Correlation |
|---|---|---|
| ICD: L52 | Erythema nodosum | 1/20 |