Case | Control |
---|---|
44486 | 415708 |
Abnormality of the anal canal. [HPO:probinson]
The anal canal is continuous proximally with the rectum and distally terminates with the anus.
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr9:136149229 | rs505922 | ABO | T>C | 29624 | 283436 | 38.72 | 4.887e-10 | 0.9552 |
chr9:136137065 | rs687621 | ABO | A>G | 29933 | 286032 | 36.48 | 1.546e-09 | 0.9565 |
chr9:136143442 | rs612169 | ABO | A>G | 29983 | 286471 | 36.08 | 1.897e-09 | 0.9569 |
chr9:136132908 | rs8176719 | ABO | T>TC | 31551 | 301236 | 35.14 | 3.068e-09 | 0.9579 |
chr9:136142355 | rs643434 | ABO | G>A | 31958 | 304846 | 34.84 | 3.586e-09 | 0.9582 |
chr9:136139265 | rs657152 | ABO | C>A | 31827 | 303555 | 34.03 | 5.436e-09 | 0.9587 |
chr9:22125503 | rs1333049 | - | G>C | 44557 | 421881 | 34.03 | 5.424e-09 | 0.9609 |
chr9:136142203 | rs514659 | ABO | A>C | 28890 | 276030 | 33.41 | 7.465e-09 | 0.9578 |
chr9:136155000 | rs635634 | - | C>T | 16363 | 158330 | 32.33 | 1.301e-08 | 0.9499 |
chr9:136149399 | rs507666 | ABO | G>A | 16492 | 159494 | 32.13 | 1.443e-08 | 0.9502 |
chr9:22124477 | rs10757278 | - | A>G | 44581 | 421519 | 30.17 | 3.949e-08 | 0.9631 |
chr9:136153875 | rs651007 | - | C>T | 18772 | 180684 | 29.41 | 5.847e-08 | 0.9546 |
chr5:33955326 | rs35390 | SLC45A2 | A>C | 4325 | 36822 | 29.38 | 5.951e-08 | 1.093 |
chr12:66401444 | rs11175997 | - | A>G | 11810 | 115001 | 29.38 | 5.964e-08 | 0.9456 |
chr2:53656677 | rs10496023 | - | A>G | 2608 | 21653 | 29.3 | 6.207e-08 | 1.12 |
chr6:21330808 | rs9348465 | - | A>C | 19588 | 175188 | 29.02 | 7.174e-08 | 1.047 |
chr2:53669583 | rs17044722 | - | A>C | 1453 | 11613 | 28.74 | 8.266e-08 | 1.162 |
chr5:33955673 | rs35391 | SLC45A2 | C>T | 4304 | 36676 | 28.72 | 8.369e-08 | 1.092 |
chr9:136154168 | rs579459 | - | T>C | 18783 | 180665 | 28.69 | 8.502e-08 | 0.9552 |
chr6:21327621 | rs12192730 | - | T>C | 26276 | 236480 | 28.14 | 1.129e-07 | 1.041 |
chr9:136149229 | rs505922 | ABO | T>C | 27335 | 264558 | 44.74 | 2.254e-11 | 0.9502 |
chr9:136143442 | rs612169 | ABO | A>G | 27466 | 265677 | 43.65 | 3.921e-11 | 0.9508 |
chr9:136137065 | rs687621 | ABO | A>G | 27433 | 265314 | 42.78 | 6.111e-11 | 0.9512 |
chr9:136142355 | rs643434 | ABO | G>A | 29391 | 283633 | 41.33 | 1.286e-10 | 0.9529 |
chr9:136142203 | rs514659 | ABO | A>C | 26528 | 256606 | 40.48 | 1.985e-10 | 0.9519 |
chr9:136139265 | rs657152 | ABO | C>A | 29295 | 282676 | 40.48 | 1.989e-10 | 0.9534 |
chr9:136132908 | rs8176719 | ABO | T>TC | 29320 | 282963 | 39.65 | 3.033e-10 | 0.9538 |
chr9:22125503 | rs1333049 | - | G>C | 42124 | 401794 | 31.6 | 1.895e-08 | 0.961 |
chr9:136155000 | rs635634 | - | C>T | 15532 | 151430 | 30.55 | 3.248e-08 | 0.95 |
chr12:66401444 | rs11175997 | - | A>G | 11215 | 110271 | 30.28 | 3.748e-08 | 0.9433 |
chr9:136149399 | rs507666 | ABO | G>A | 15649 | 152475 | 30.23 | 3.828e-08 | 0.9504 |
chr9:22124477 | rs10757278 | - | A>G | 42167 | 401939 | 30.19 | 3.921e-08 | 0.9619 |
chr17:44333890 | Affx-13934460 | - | G>A | 19917 | 179417 | 29.02 | 7.165e-08 | 1.047 |
chr9:136153875 | rs651007 | - | C>T | 17802 | 172604 | 27.42 | 1.639e-07 | 0.9549 |
chr17:44038785 | Affx-13929237 | MAPT | A>G | 20102 | 181626 | 26.95 | 2.086e-07 | 1.045 |
chr17:44326845 | rs2696624 | - | A>G | 18858 | 169537 | 26.8 | 2.26e-07 | 1.046 |
chr9:136154168 | rs579459 | - | T>C | 17817 | 172616 | 26.58 | 2.527e-07 | 0.9556 |
chr9:22096055 | rs10757274 | - | A>G | 42788 | 407365 | 26.11 | 3.22e-07 | 0.9645 |
chr17:43661801 | Affx-13923041 | - | T>G | 19360 | 174651 | 26.11 | 3.217e-07 | 1.045 |
chr9:136154867 | rs495828 | - | G>T | 17794 | 172354 | 26.03 | 3.367e-07 | 0.956 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr12:66401444 | rs11175997 | - | A>G | 11215 | 14924 | 26.42 | 2.747e-07 | 0.9335 |
chr6:1775863 | rs722585 | GMDS | G>A | 24539 | 31876 | 25.8 | 3.797e-07 | 0.9504 |
chr6:21327621 | rs12192730 | - | T>C | 23267 | 28035 | 25.72 | 3.956e-07 | 1.054 |
chr5:64238731 | rs11738728 | CWC27 | G>A | 31396 | 40583 | 25.58 | 4.251e-07 | 0.9536 |
chr2:18728276 | rs2346133 | - | C>T | 6769 | 9160 | 24.96 | 5.865e-07 | 0.92 |
chr2:20878105 | rs9306894 | GDF7 | A>G | 31431 | 40628 | 24.96 | 5.856e-07 | 0.9542 |
chr2:36783599 | rs17019087 | FEZ2 | T>C | 32533 | 41978 | 24.88 | 6.09e-07 | 0.9546 |
chr7:73320111 | rs12538362 | - | C>T | 17999 | 21597 | 24.0 | 9.644e-07 | 1.057 |
chr9:94939981 | rs9299400 | - | G>A | 31749 | 38657 | 23.8 | 1.07e-06 | 1.048 |
chr5:64137108 | rs10434529 | CWC27 | T>C | 30052 | 38804 | 23.63 | 1.169e-06 | 0.955 |
chr25:155183483 | rs73237015 | - | G>A | 16054 | 21048 | 23.0 | 1.619e-06 | 0.9459 |
chr9:95218829 | rs8067 | CENPP | G>T | 33352 | 40648 | 22.52 | 2.077e-06 | 1.045 |
chr4:80968639 | rs4566597 | ANTXR2 | T>C | 10452 | 12351 | 22.3 | 2.336e-06 | 1.069 |
chr2:215248914 | rs116332067 | SPAG16 | T>C | 2871 | 4028 | 22.08 | 2.615e-06 | 0.8898 |
chr14:93842808 | rs1956544 | UNC79 | T>C | 25376 | 30711 | 22.07 | 2.625e-06 | 1.049 |
chr10:85740524 | rs17250702 | - | G>A | 20490 | 24691 | 21.8 | 3.028e-06 | 1.051 |
chr6:21330808 | rs9348465 | - | A>C | 17771 | 21344 | 21.79 | 3.049e-06 | 1.054 |
chr9:95284873 | rs9299405 | CENPP | A>G | 25066 | 30388 | 21.77 | 3.076e-06 | 1.048 |
chr9:95279985 | rs968040 | CENPP | C>A | 24966 | 30255 | 21.57 | 3.42e-06 | 1.048 |
chr12:51213765 | rs11169571 | ATF1 | T>C | 35603 | 45765 | 21.17 | 4.193e-06 | 0.9587 |