obsolete Anomaly of the limb diaphyses morphology

0006504

Normal Case/Contol ^ⓘ

Sibling Case/Control ^ⓘ

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Statistics

Case	Control
37169	423025

Top SNP Information

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds ratio
chr15:48426484	rs1426654	SLC24A5	A>G	1865	25661	60.77	6.4e-15	0.8278
chr20:34025756	rs143384	GDF5	A>G	31655	375109	60.64	6.85e-15	0.9426
chr20:34025983	rs78110303	GDF5	A>G	28477	338044	55.23	1.071e-13	0.9441
chr20:33971914	rs4911494	UQCC1	T>C	28767	341233	53.95	2.059e-13	0.9448
chr20:33975181	rs6088813	UQCC1	A>C	28783	341365	53.23	2.972e-13	0.9452
chr20:33907161	rs6060369	UQCC1	T>C	28933	343006	52.66	3.97e-13	0.9456
chr20:33914208	rs6060373	UQCC1	A>G	28991	343611	52.61	4.059e-13	0.9456
chr20:33972899	rs4911179	UQCC1	C>A	28787	341168	52.17	5.094e-13	0.9457
chr15:48392165	rs1834640	-	A>G	2218	29406	46.13	1.104e-11	0.8593
chr15:75047426	rs2470890	CYP1A2	T>C	27223	322433	46.01	1.179e-11	0.9484
chr5:106908138	rs163961	EFNA5	A>C	2140	28428	45.83	1.288e-11	0.8574
chr15:74716174	rs11856835	SEMA7A	G>A	38268	426949	45.17	1.811e-11	1.052
chr15:75044238	rs2472304	CYP1A2	A>G	27228	322344	44.07	3.172e-11	0.9494
chr15:75101530	rs34862454	-	T>C	27021	319844	43.48	4.281e-11	0.9496
chr6:33160425	rs9277935	-	G>T	16304	195794	43.47	4.311e-11	0.9414
chr5:158327749	rs1001066	EBF1	A>G	840	12131	43.12	5.147e-11	0.7905
chr20:34022387	rs224331	GDF5-AS1	A>C	23876	285372	42.18	8.323e-11	0.9476
chr1:236085940	rs12038310	-	C>T	1012	14264	41.85	9.869e-11	0.8094
chr6:93667780	rs9363020	-	G>A	774	11217	40.96	1.552e-10	0.7878
chr15:74734819	rs750607	-	T>C	33992	399290	40.8	1.688e-10	0.9529
chr20:34025756	rs143384	GDF5	A>G	28999	341777	55.11	1.14e-13	0.9434
chr20:33971914	rs4911494	UQCC1	T>C	26532	313311	52.75	3.793e-13	0.9437
chr20:33975181	rs6088813	UQCC1	A>C	26549	313472	51.85	5.993e-13	0.9441
chr20:33972899	rs4911179	UQCC1	C>A	26550	313275	50.73	1.06e-12	0.9447
chr20:33907161	rs6060369	UQCC1	T>C	26595	313832	50.68	1.09e-12	0.9448
chr20:33914208	rs6060373	UQCC1	A>G	26638	314272	50.51	1.185e-12	0.9449
chr20:34025983	rs78110303	GDF5	A>G	25900	305664	48.82	2.81e-12	0.9454
chr20:34022387	rs224331	GDF5-AS1	A>C	22167	263646	41.14	1.42e-10	0.9465
chr17:2017079	rs2760743	SMG6	C>A	22572	247293	41.09	1.457e-10	1.055
chr17:2084008	rs1994884	SMG6	G>A	22670	249098	37.12	1.109e-09	1.052
chr17:2092064	rs11078856	SMG6	G>A	23856	262726	34.28	4.782e-09	1.049
chr2:33380895	rs7571401	LTBP1	C>G	33615	373303	33.86	5.937e-09	1.046
chr2:33459306	rs11678479	LTBP1	A>G	3589	37008	33.35	7.697e-09	1.109
chr17:2091765	rs903160	SMG6	C>T	24067	265423	32.55	1.163e-08	1.048
chr17:70037793	rs12603032	-	G>T	30947	343226	31.49	2.001e-08	1.045
chr2:33401632	rs10495783	LTBP1	T>C	33555	373028	31.18	2.349e-08	1.044
chr2:33554191	rs57489629	LTBP1	G>T	4456	46624	30.73	2.966e-08	1.094
chr16:69960492	rs904805	WWP2	A>G	18829	221906	30.4	3.513e-08	0.9526
chr15:74716174	rs11856835	SEMA7A	G>A	37598	419162	29.77	4.864e-08	1.043
chr6:33160425	rs9277935	-	G>T	15257	180918	29.5	5.58e-08	0.9499

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds ratio
chr20:34025756	rs143384	GDF5	A>G	28999	76838	36.37	1.635e-09	0.948
chr20:33971914	rs4911494	UQCC1	T>C	26532	70324	31.7	1.795e-08	0.9505
chr20:33975181	rs6088813	UQCC1	A>C	26549	70355	31.1	2.455e-08	0.951
chr20:33914208	rs6060373	UQCC1	A>G	26638	70571	31.09	2.462e-08	0.9511
chr20:33907161	rs6060369	UQCC1	T>C	26595	70461	31.0	2.583e-08	0.9511
chr20:33972899	rs4911179	UQCC1	C>A	26550	70332	30.18	3.928e-08	0.9517
chr6:33098276	rs6901221	-	A>C	11161	30273	30.04	4.243e-08	0.9362
chr20:34025983	rs78110303	GDF5	A>G	25900	68621	29.6	5.314e-08	0.9519
chr12:123457619	rs7296418	ABCB9	T>C	20606	54900	29.55	5.437e-08	0.949
chr6:33097964	rs3116996	-	T>A	11192	30333	29.24	6.396e-08	0.9371
chr6:33097382	rs3130235	-	G>A	11189	30329	29.23	6.428e-08	0.9371
chr6:33097058	rs3117002	-	A>G	11202	30358	29.02	7.146e-08	0.9373
chr6:33097561	rs3130237	-	T>C	11181	30298	28.8	8.026e-08	0.9375
chr12:123464279	rs3759115	ABCB9	C>T	20759	55271	28.19	1.098e-07	0.9503
chr12:123575742	rs1727307	PITPNM2	G>A	20064	53327	27.84	1.318e-07	0.9499
chr6:33160425	rs9277935	-	G>T	15257	40948	27.47	1.593e-07	0.9457
chr6:33098344	rs6901830	-	G>A	11202	30302	27.15	1.88e-07	0.9393
chr6:33148878	rs2744507	COL11A2	C>T	9771	26551	26.96	2.081e-07	0.9361
chr6:26111756	rs16891315	-	T>C	10009	24239	26.95	2.086e-07	1.068
chr17:2017079	rs2760743	SMG6	C>A	22572	55926	26.9	2.148e-07	1.05

Associated Diseases ^ⓘ

ID	Name	Top Correlation
ICD: M179	Gonarthrosis, unspecified	8/20
ICD: M189	Arthrosis of first carpometacarpal joint, unspecified	2/20
ICD: M1994	Arthrosis, unspecified (Hand)	2/20
ICD: M1997	Arthrosis, unspecified (Ankle and foot)	2/20

ID	Name	Top Correlation
ICD-10: B348	Other viral infections of unspecified site	0/20
ICD-10: B349	Viral infection, unspecified	0/20
ICD-10: M167	Other secondary coxarthrosis	0/20
ICD-10: M170	Primary gonarthrosis, bilateral	0/20
ICD-10: M173	Other posttraumatic gonarthrosis	0/20
ICD-10: M175	Other secondary gonarthrosis	0/20
ICD-10: M180	Primary arthrosis of first carpometacarpal joints, bilateral	0/20
ICD-10: M181	Other primary arthrosis of first carpometacarpal joint	0/20
ICD-10: M190	Primary arthrosis of other joints	0/20
ICD-10: M1995	Arthrosis, unspecified (Pelvic region and thigh)	0/20
ICD-10: M1996	Arthrosis, unspecified-Lower leg	0/20
ICD-10: M1998	Arthrosis, unspecified (Other)	0/20
ICD-10: M1999	Arthrosis, unspecified (Site unspecified)	0/20
ICD-10: M2106	Valgus deformity, not elsewhere classified (Lower leg)	0/20
ICD-10: M938	Other specified osteochondropathies	0/20
ICD-10: M939	Osteochondropathy, unspecified	0/20
ICD-10: M960	Pseudarthrosis after fusion or arthrodesis	0/20
ICD-10: R700	Elevated erythrocyte sedimentation rate	0/20

obsolete Anomaly of the limb diaphyses morphology

0006504

Normal Case/Contol ⓘ

Sibling Case/Control ⓘ

Links

Statistics

Top SNP Information Show Normal Table Show Sibling SNP

Associated Diseases ⓘ Shared SNP diseases No shared SNP diseases

Normal Case/Contol ^ⓘ

Sibling Case/Control ^ⓘ

Top SNP Information

Associated Diseases ^ⓘ