Female Case | Female Control | % Female |
---|---|---|
6292 | 243565 | 46% |
Male Case | Male Control | % Male |
---|---|---|
7318 | 203019 | 54% |
Obstruction of conducting airways of the lung. [HPO:probinson]
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr15:48426484 | rs1426654 | SLC24A5 | A>G | 226 | 15818 | 77.59 | 1.269e-18 | 0.556 |
chr15:48392165 | rs1834640 | - | A>G | 283 | 17874 | 65.16 | 6.916e-16 | 0.6161 |
chr23:71628912 | rs3012642 | AL133500.1 | A>G | 251 | 16257 | 63.91 | 1.305e-15 | 0.6017 |
chr6:170242949 | rs9396958 | - | T>C | 115 | 9209 | 60.18 | 8.643e-15 | 0.4888 |
chr15:78882925 | rs16969968 | CHRNA5 | G>A | 4579 | 165205 | 53.05 | 3.25e-13 | 1.145 |
chr9:16918076 | rs10125606 | - | T>G | 68 | 6248 | 51.73 | 6.365e-13 | 0.426 |
chr15:78878541 | rs951266 | CHRNA5 | G>A | 4580 | 165377 | 51.45 | 7.333e-13 | 1.142 |
chr15:78857939 | rs55853698 | CHRNA5 | T>G | 4631 | 167362 | 51.15 | 8.568e-13 | 1.142 |
chr15:78894339 | rs1051730 | CHRNA3 | G>A | 4585 | 165606 | 51.0 | 9.215e-13 | 1.142 |
chr15:78873993 | rs7180002 | CHRNA5 | A>T | 4575 | 165309 | 50.13 | 1.441e-12 | 1.141 |
chr15:78868636 | rs72740964 | CHRNA5 | G>A | 4505 | 163009 | 48.93 | 2.659e-12 | 1.14 |
chr1:65860660 | rs12077111 | DNAJC6 | T>C | 241 | 14755 | 48.12 | 4.002e-12 | 0.637 |
chr5:33958959 | rs28777 | SLC45A2 | A>C | 580 | 30260 | 47.42 | 5.74e-12 | 0.7451 |
chr9:127267689 | rs3814134 | NR5A1 | A>G | 272 | 16192 | 47.42 | 5.72e-12 | 0.6555 |
chr5:33951693 | rs16891982 | SLC45A2 | G>C | 699 | 35508 | 47.34 | 5.97e-12 | 0.7639 |
chr23:128718936 | rs2362937 | OCRL | T>C | 234 | 14382 | 47.27 | 6.195e-12 | 0.6355 |
chr1:65858151 | rs11208644 | DNAJC6 | C>T | 241 | 14689 | 46.75 | 8.083e-12 | 0.6411 |
chr3:50336292 | rs72932959 | - | A>G | 57 | 5399 | 46.56 | 8.867e-12 | 0.414 |
chr15:78857986 | rs55781567 | CHRNA5 | C>G | 4665 | 169603 | 46.32 | 1.004e-11 | 1.134 |
chr3:50352200 | rs11130248 | - | A>G | 57 | 5345 | 46.04 | 1.157e-11 | 0.4159 |
chr15:78878541 | rs951266 | CHRNA5 | G>A | 4468 | 160218 | 37.75 | 8.031e-10 | 1.123 |
chr15:78857986 | rs55781567 | CHRNA5 | C>G | 4525 | 162524 | 37.56 | 8.87e-10 | 1.122 |
chr15:78882925 | rs16969968 | CHRNA5 | G>A | 4476 | 160667 | 37.44 | 9.409e-10 | 1.122 |
chr15:78898723 | rs12914385 | CHRNA3 | C>T | 5129 | 185541 | 37.36 | 9.824e-10 | 1.119 |
chr15:78894339 | rs1051730 | CHRNA3 | G>A | 4472 | 160418 | 37.18 | 1.08e-09 | 1.122 |
chr15:78873993 | rs7180002 | CHRNA5 | A>T | 4464 | 160150 | 36.97 | 1.201e-09 | 1.122 |
chr15:78857939 | rs55853698 | CHRNA5 | T>G | 4524 | 162574 | 36.31 | 1.685e-09 | 1.12 |
chr15:78867482 | rs17486278 | CHRNA5 | A>C | 4473 | 160802 | 35.85 | 2.126e-09 | 1.12 |
chr15:78911672 | rs4243084 | CHRNA3 | G>C | 4531 | 163251 | 34.82 | 3.621e-09 | 1.117 |
chr15:78868636 | rs72740964 | CHRNA5 | G>A | 4403 | 158479 | 34.4 | 4.479e-09 | 1.118 |
chr15:78814046 | rs10519203 | HYKK | A>G | 4538 | 163508 | 34.38 | 4.529e-09 | 1.117 |
chr15:78806023 | rs8034191 | HYKK | T>C | 4519 | 162741 | 34.29 | 4.757e-09 | 1.117 |
chr15:78802869 | rs9788721 | HYKK | T>C | 4584 | 165354 | 34.13 | 5.164e-09 | 1.116 |
chr15:78911181 | rs8040868 | CHRNA3 | T>C | 5257 | 190754 | 34.08 | 5.295e-09 | 1.113 |
chr15:78896129 | rs1317286 | CHRNA3 | A>G | 4495 | 161904 | 33.82 | 6.035e-09 | 1.116 |
chr15:78826180 | rs931794 | HYKK | A>G | 4521 | 163360 | 32.41 | 1.247e-08 | 1.113 |
chr4:145474473 | rs1489759 | AC098588.2 | A>G | 4646 | 191892 | 32.23 | 1.369e-08 | 0.8991 |
chr4:145479761 | rs6537293 | AC098588.2 | A>G | 4658 | 192215 | 30.82 | 2.834e-08 | 0.9014 |
chr4:145480780 | rs1828591 | AC098588.2 | A>G | 4664 | 192578 | 30.66 | 3.069e-08 | 0.9016 |
chr4:145506456 | rs13141641 | AC098588.2 | T>C | 4649 | 191745 | 30.48 | 3.379e-08 | 0.9019 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr15:48426484 | rs1426654 | SLC24A5 | A>G | 224 | 11258 | 77.07 | 1.652e-18 | 0.5552 |
chr2:171380643 | rs34020565 | MYO3B | T>G | 221 | 10949 | 71.87 | 2.298e-17 | 0.5641 |
chr1:159174683 | rs2814778 | ACKR1 | T>C | 147 | 8193 | 70.62 | 4.328e-17 | 0.502 |
chr15:48392165 | rs1834640 | - | A>G | 290 | 13177 | 67.3 | 2.328e-16 | 0.6145 |
chr5:147863034 | rs9325101 | HTR4 | A>G | 120 | 7036 | 66.79 | 3.017e-16 | 0.4778 |
chr5:33958959 | rs28777 | SLC45A2 | A>C | 668 | 25484 | 62.9 | 2.177e-15 | 0.7286 |
chr15:45491394 | rs1648299 | SHF | T>C | 128 | 7178 | 62.52 | 2.64e-15 | 0.4995 |
chr6:136480972 | rs9483910 | PDE7B | C>T | 180 | 9049 | 61.82 | 3.765e-15 | 0.556 |
chr2:66725070 | rs12995572 | MEIS1 | G>C | 259 | 11729 | 58.86 | 1.697e-14 | 0.6179 |
chr5:33951693 | rs16891982 | SLC45A2 | G>C | 820 | 30031 | 58.16 | 2.414e-14 | 0.7583 |
chr8:145639681 | rs1871534 | SLC39A4 | G>C | 145 | 7580 | 56.65 | 5.203e-14 | 0.5358 |
chr15:45556163 | rs8023604 | SLC28A2 | T>C | 91 | 5487 | 54.62 | 1.466e-13 | 0.4654 |
chr9:140957557 | rs11137360 | CACNA1B | A>G | 182 | 8823 | 54.29 | 1.727e-13 | 0.5779 |
chr6:3185712 | rs7754077 | - | C>T | 159 | 7930 | 52.6 | 4.082e-13 | 0.5621 |
chr15:45695612 | rs1346265 | SPATA5L1 | C>T | 80 | 4967 | 52.04 | 5.451e-13 | 0.452 |
chr6:37328215 | Affx-28571852 | RNF8 | C>CT | 166 | 8161 | 52.02 | 5.488e-13 | 0.5705 |
chr3:188327555 | rs7645635 | LPP | T>C | 110 | 6080 | 51.11 | 8.73e-13 | 0.508 |
chr10:49801412 | rs73302224 | ARHGAP22 | T>C | 164 | 8014 | 50.49 | 1.197e-12 | 0.5732 |
chr2:116743703 | rs10173690 | - | T>C | 362 | 14782 | 50.01 | 1.531e-12 | 0.6849 |
chr10:49805216 | rs11101394 | ARHGAP22 | C>T | 159 | 7804 | 49.98 | 1.552e-12 | 0.57 |
chr6:396321 | rs12203592 | IRF4 | C>T | 3458 | 87577 | 34.5 | 4.256e-09 | 1.124 |
chr15:78789488 | rs13180 | IREB2 | T>C | 5287 | 156269 | 33.62 | 6.694e-09 | 0.9035 |
chr15:78754000 | rs1964678 | IREB2 | G>A | 5260 | 155471 | 33.51 | 7.103e-09 | 0.9035 |
chr15:78774271 | rs8042238 | IREB2 | T>C | 5290 | 156237 | 32.84 | 1.002e-08 | 0.9046 |
chr6:421281 | rs62389423 | - | G>A | 2837 | 71287 | 32.57 | 1.148e-08 | 1.129 |
chr6:475489 | rs12210050 | - | C>T | 3212 | 81651 | 29.62 | 5.251e-08 | 1.117 |
chr8:81304576 | rs4739739 | - | A>G | 6372 | 168113 | 26.58 | 2.533e-07 | 1.092 |
chr15:78898723 | rs12914385 | CHRNA3 | C>T | 5871 | 154312 | 26.57 | 2.542e-07 | 1.093 |
chr15:78873119 | rs569207 | CHRNA5 | C>T | 3086 | 92871 | 26.08 | 3.279e-07 | 0.9002 |
chr7:23603071 | rs227943 | - | T>C | 1155 | 37023 | 25.92 | 3.55e-07 | 0.8535 |
chr15:78863472 | rs667282 | CHRNA5 | T>C | 3083 | 92715 | 25.41 | 4.629e-07 | 0.9013 |
chr15:78907656 | rs6495308 | CHRNA3 | T>C | 3103 | 93160 | 24.13 | 8.984e-07 | 0.9039 |
chr8:81315490 | rs28661389 | - | A>G | 5950 | 156930 | 24.02 | 9.522e-07 | 1.088 |
chr15:78896547 | rs938682 | CHRNA3 | A>G | 3105 | 93132 | 23.97 | 9.776e-07 | 0.9043 |
chr20:62002451 | rs62206958 | CHRNA4 | C>T | 1221 | 29575 | 23.36 | 1.341e-06 | 1.159 |
chr15:78911181 | rs8040868 | CHRNA3 | T>C | 6008 | 158727 | 23.15 | 1.501e-06 | 1.086 |
chr15:78891627 | rs12910984 | CHRNA3 | A>G | 3108 | 93064 | 22.67 | 1.923e-06 | 0.9068 |
chr15:78741384 | rs2656074 | IREB2 | C>T | 2936 | 88230 | 22.59 | 2.002e-06 | 0.905 |
chr8:81295224 | rs1543857 | - | A>G | 5940 | 156905 | 22.52 | 2.081e-06 | 1.085 |
chr24:14902414 | rs20321 | USP9Y | G>A | 397 | 8757 | 21.96 | 2.782e-06 | 1.28 |