Case | Control |
---|---|
83073 | 377121 |
A tumor (abnormal growth of tissue) of the skin. [HPO:probinson]
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr6:396321 | rs12203592 | IRF4 | C>T | 38427 | 162778 | 219.1 | 1.398e-49 | 1.1 |
chr3:38051211 | rs75495843 | PLCD1 | G>A | 6089 | 22919 | 184.4 | 5.347e-42 | 1.22 |
chr6:421281 | rs62389423 | - | G>A | 31238 | 132798 | 154.1 | 2.174e-35 | 1.09 |
chr24:14850341 | rs2032598 | USP9Y | T>C | 239 | 2573 | 127.2 | 1.655e-29 | 0.4732 |
chr5:33951693 | rs16891982 | SLC45A2 | G>C | 11020 | 56038 | 115.8 | 5.303e-27 | 0.8906 |
chr23:106146349 | rs5962774 | MORC4 | T>C | 2450 | 8576 | 104.6 | 1.496e-24 | 1.266 |
chr5:33955326 | rs35390 | SLC45A2 | A>C | 6669 | 34478 | 90.9 | 1.508e-21 | 0.8781 |
chr5:33958959 | rs28777 | SLC45A2 | A>C | 9400 | 47592 | 90.03 | 2.34e-21 | 0.8958 |
chr5:33955673 | rs35391 | SLC45A2 | C>T | 6645 | 34335 | 89.83 | 2.592e-21 | 0.8786 |
chr24:14641193 | rs13304168 | - | T>C | 12810 | 70507 | 85.01 | 2.971e-20 | 0.8955 |
chr23:64367019 | rs7064929 | - | G>A | 3705 | 13861 | 82.34 | 1.145e-19 | 1.185 |
chr3:169492101 | rs10936599 | MYNN | C>T | 40997 | 195265 | 81.71 | 1.578e-19 | 0.9454 |
chr24:18656508 | rs9785702 | - | C>G | 12405 | 68264 | 80.9 | 2.37e-19 | 0.8972 |
chr24:22739367 | rs9786153 | EIF1AY | C>T | 12412 | 68291 | 80.35 | 3.131e-19 | 0.8976 |
chr24:2887824 | rs9786184 | - | A>C | 12378 | 68113 | 80.19 | 3.409e-19 | 0.8976 |
chr3:169497585 | rs1317082 | MYNN | A>G | 40967 | 195048 | 80.17 | 3.434e-19 | 0.9459 |
chr24:14416216 | rs13304202 | - | A>G | 12435 | 68413 | 80.04 | 3.665e-19 | 0.8978 |
chr24:14193384 | rs9786774 | - | A>G | 12390 | 68138 | 79.27 | 5.419e-19 | 0.8982 |
chr24:14956117 | rs35108305 | USP9Y | A>C | 12473 | 68474 | 76.88 | 1.812e-18 | 0.8998 |
chr24:6941218 | rs9306845 | TBL1Y | A>G | 1372 | 8906 | 69.51 | 7.62e-17 | 0.7819 |
chr6:396321 | rs12203592 | IRF4 | C>T | 37990 | 160925 | 190.7 | 2.263e-43 | 1.094 |
chr3:38051211 | rs75495843 | PLCD1 | G>A | 5865 | 21992 | 174.9 | 6.254e-40 | 1.218 |
chr6:421281 | rs62389423 | - | G>A | 30845 | 131020 | 135.1 | 3.065e-31 | 1.085 |
chr3:169492101 | rs10936599 | MYNN | C>T | 39214 | 184925 | 61.99 | 3.449e-15 | 0.9511 |
chr3:169497585 | rs1317082 | MYNN | A>G | 39219 | 184903 | 61.25 | 5.031e-15 | 0.9514 |
chr6:475489 | rs12210050 | - | C>T | 34668 | 151328 | 53.81 | 2.214e-13 | 1.05 |
chr3:169518455 | rs6793295 | LRRC34 | T>C | 41906 | 196531 | 50.73 | 1.058e-12 | 0.9565 |
chr3:169481271 | rs12696304 | - | C>G | 42668 | 200121 | 50.65 | 1.104e-12 | 0.9569 |
chr16:89986117 | Affx-35293625 | MC1R | C>T | 17790 | 76401 | 49.69 | 1.799e-12 | 1.064 |
chr16:89818732 | rs12931267 | FANCA | C>G | 17586 | 75509 | 49.34 | 2.157e-12 | 1.064 |
chr11:89017961 | rs1126809 | TYR | G>A | 49444 | 217893 | 48.29 | 3.667e-12 | 1.042 |
chr3:37999745 | rs7629707 | CTDSPL | G>A | 13014 | 55432 | 46.22 | 1.057e-11 | 1.071 |
chr3:169579971 | rs1920116 | LRRC31 | G>A | 44540 | 208402 | 45.78 | 1.321e-11 | 0.9595 |
chr11:89005253 | rs1847134 | TYR | A>C | 56868 | 251790 | 43.65 | 3.931e-11 | 1.039 |
chr3:38033071 | rs60721494 | VILL | G>T | 26918 | 117328 | 43.22 | 4.891e-11 | 1.05 |
chr11:89011046 | rs1393350 | TYR | G>A | 49071 | 216661 | 43.22 | 4.899e-11 | 1.04 |
chr3:169554084 | rs4352416 | LRRIQ4 | G>A | 40203 | 188294 | 42.96 | 5.595e-11 | 0.9594 |
chr20:33874188 | rs74849579 | FAM83C | A>G | 20694 | 89714 | 42.88 | 5.808e-11 | 1.055 |
chr16:90067184 | rs73283869 | - | G>A | 16541 | 71185 | 42.75 | 6.217e-11 | 1.061 |
chr16:90067136 | rs78800020 | - | G>C | 16626 | 71567 | 42.22 | 8.174e-11 | 1.061 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr3:38051211 | rs75495843 | PLCD1 | G>A | 6089 | 11079 | 153.3 | 3.223e-35 | 1.222 |
chr6:396321 | rs12203592 | IRF4 | C>T | 38427 | 79630 | 136.9 | 1.294e-31 | 1.086 |
chr6:421281 | rs62389423 | - | G>A | 31238 | 64824 | 101.2 | 8.421e-24 | 1.079 |
chr23:106146349 | rs5962774 | MORC4 | T>C | 2450 | 4220 | 86.37 | 1.496e-20 | 1.268 |
chr5:33951693 | rs16891982 | SLC45A2 | G>C | 11020 | 26820 | 78.05 | 1.006e-18 | 0.9018 |
chr5:33955326 | rs35390 | SLC45A2 | A>C | 6669 | 16571 | 68.38 | 1.351e-16 | 0.8849 |
chr24:14850341 | rs2032598 | USP9Y | T>C | 239 | 999 | 67.76 | 1.85e-16 | 0.5562 |
chr5:33955673 | rs35391 | SLC45A2 | C>T | 6645 | 16497 | 67.13 | 2.536e-16 | 0.8857 |
chr23:64367019 | rs7064929 | - | G>A | 3705 | 6916 | 58.36 | 2.178e-14 | 1.17 |
chr23:109671384 | rs768312 | AMMECR1 | T>C | 3278 | 6066 | 57.47 | 3.425e-14 | 1.181 |
chr5:33958959 | rs28777 | SLC45A2 | A>C | 9400 | 22725 | 57.11 | 4.127e-14 | 0.9091 |
chr24:14641193 | rs13304168 | - | T>C | 12810 | 31840 | 54.96 | 1.229e-13 | 0.9077 |
chr24:18656508 | rs9785702 | - | C>G | 12405 | 30792 | 50.59 | 1.138e-12 | 0.9106 |
chr24:2887824 | rs9786184 | - | A>C | 12378 | 30731 | 50.48 | 1.202e-12 | 0.9107 |
chr24:14416216 | rs13304202 | - | A>G | 12435 | 30872 | 50.27 | 1.342e-12 | 0.911 |
chr24:22739367 | rs9786153 | EIF1AY | C>T | 12412 | 30804 | 50.26 | 1.345e-12 | 0.9109 |
chr24:14193384 | rs9786774 | - | A>G | 12390 | 30742 | 49.71 | 1.785e-12 | 0.9114 |
chr24:14956117 | rs35108305 | USP9Y | A>C | 12473 | 30923 | 48.9 | 2.689e-12 | 0.9121 |
chr3:169492101 | rs10936599 | MYNN | C>T | 40997 | 93919 | 48.75 | 2.901e-12 | 0.9538 |
chr16:89986117 | Affx-35293625 | MC1R | C>T | 17943 | 37344 | 48.43 | 3.426e-12 | 1.069 |
chr3:38051211 | rs75495843 | PLCD1 | G>A | 5865 | 10622 | 147.2 | 7.221e-34 | 1.222 |
chr6:396321 | rs12203592 | IRF4 | C>T | 37990 | 78687 | 119.6 | 7.863e-28 | 1.081 |
chr6:421281 | rs62389423 | - | G>A | 30845 | 63924 | 89.82 | 2.609e-21 | 1.075 |
chr16:89986117 | Affx-35293625 | MC1R | C>T | 17790 | 36971 | 42.93 | 5.678e-11 | 1.065 |
chr16:89818732 | rs12931267 | FANCA | C>G | 17586 | 36578 | 40.89 | 1.607e-10 | 1.064 |
chr3:37999745 | rs7629707 | CTDSPL | G>A | 13014 | 26858 | 37.99 | 7.115e-10 | 1.071 |
chr16:90067184 | rs73283869 | - | G>A | 16541 | 34425 | 37.71 | 8.207e-10 | 1.063 |
chr16:90067136 | rs78800020 | - | G>C | 16626 | 34609 | 37.26 | 1.033e-09 | 1.063 |
chr3:169492101 | rs10936599 | MYNN | C>T | 39214 | 89051 | 37.14 | 1.1e-09 | 0.9586 |
chr3:169497585 | rs1317082 | MYNN | A>G | 39219 | 89031 | 36.53 | 1.5e-09 | 0.9589 |
chr16:90048395 | rs45610233 | - | C>T | 15771 | 32840 | 35.16 | 3.044e-09 | 1.062 |
chr6:475489 | rs12210050 | - | C>T | 34668 | 73656 | 34.59 | 4.06e-09 | 1.044 |
chr16:90084561 | rs11648785 | DBNDD1 | C>T | 47332 | 106921 | 33.98 | 5.573e-09 | 0.9625 |
chr3:38033071 | rs60721494 | VILL | G>T | 26918 | 56922 | 33.59 | 6.796e-09 | 1.048 |
chr2:202215492 | rs13014235 | FLACC1 | G>C | 66137 | 142444 | 32.1 | 1.467e-08 | 1.035 |
chr16:90093075 | rs77270200 | GAS8 | G>A | 17716 | 37128 | 31.4 | 2.101e-08 | 1.056 |
chr2:202122995 | rs3769823 | CASP8 | G>A | 48027 | 102868 | 31.22 | 2.309e-08 | 1.037 |
chr5:1315660 | rs4975616 | - | A>G | 68888 | 154444 | 31.06 | 2.502e-08 | 0.9671 |
chr16:89755903 | rs258322 | CDK10 | G>A | 20106 | 42294 | 30.69 | 3.024e-08 | 1.052 |
chr5:1342714 | rs31489 | CLPTM1L | C>A | 66810 | 149870 | 30.58 | 3.2e-08 | 0.9672 |