Case | Control |
---|---|
75254 | 384940 |
The presence of inflammation of the skin. That is, an abnormality of the skin resulting from the local accumulation of fluid, plasma proteins, and leukocytes. [HPO:probinson]
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr6:396321 | rs12203592 | IRF4 | C>T | 34597 | 166608 | 156.0 | 8.658e-36 | 1.087 |
chr15:48426484 | rs1426654 | SLC24A5 | A>G | 3767 | 23759 | 139.9 | 2.835e-32 | 0.8109 |
chr15:48392165 | rs1834640 | - | A>G | 4475 | 27149 | 109.0 | 1.631e-25 | 0.8431 |
chr6:421281 | rs62389423 | - | G>A | 28091 | 135945 | 104.0 | 1.98e-24 | 1.076 |
chr5:33951693 | rs16891982 | SLC45A2 | G>C | 9993 | 57065 | 100.4 | 1.261e-23 | 0.8938 |
chr2:211717706 | rs12995612 | - | C>G | 2218 | 14254 | 97.63 | 5.055e-23 | 0.7972 |
chr6:170242949 | rs9396958 | - | T>C | 2167 | 13947 | 96.18 | 1.049e-22 | 0.7965 |
chr10:133971487 | rs7908899 | JAKMIP3 | G>A | 5505 | 32226 | 81.91 | 1.425e-19 | 0.8743 |
chr5:33958959 | rs28777 | SLC45A2 | A>C | 8544 | 48448 | 73.74 | 8.927e-18 | 0.9016 |
chr5:147671850 | rs7724380 | - | G>A | 2843 | 17340 | 72.98 | 1.309e-17 | 0.8401 |
chr13:72463541 | rs1460465 | - | A>G | 2230 | 13894 | 72.33 | 1.819e-17 | 0.8227 |
chr12:3417813 | rs729914 | - | G>T | 2226 | 13861 | 71.68 | 2.529e-17 | 0.8233 |
chr10:108672251 | rs1572457 | SORCS1 | C>T | 1576 | 10142 | 69.83 | 6.469e-17 | 0.797 |
chr5:147666044 | rs7707813 | - | T>C | 2641 | 16122 | 68.27 | 1.427e-16 | 0.8397 |
chr1:159174683 | rs2814778 | ACKR1 | T>C | 2739 | 16638 | 66.8 | 3.011e-16 | 0.8438 |
chr4:100239319 | rs1229984 | ADH1B | C>T | 4444 | 26032 | 66.46 | 3.57e-16 | 0.8745 |
chr10:12267086 | rs10906102 | CDC123 | T>C | 5126 | 29742 | 66.23 | 4.01e-16 | 0.8824 |
chr10:133976308 | rs9419384 | JAKMIP3 | C>T | 4313 | 25278 | 65.23 | 6.673e-16 | 0.8739 |
chr19:42393286 | rs717225 | ARHGEF1 | A>G | 3141 | 18802 | 63.83 | 1.36e-15 | 0.856 |
chr6:22050187 | rs1736507 | - | C>A | 2013 | 12500 | 63.33 | 1.747e-15 | 0.8252 |
chr6:396321 | rs12203592 | IRF4 | C>T | 34209 | 164706 | 133.1 | 8.669e-31 | 1.081 |
chr6:421281 | rs62389423 | - | G>A | 27751 | 134114 | 91.1 | 1.369e-21 | 1.072 |
chr6:475489 | rs12210050 | - | C>T | 31393 | 154603 | 46.8 | 7.868e-12 | 1.049 |
chr6:31176226 | rs3132506 | - | T>C | 41965 | 208306 | 42.87 | 5.862e-11 | 1.042 |
chr6:32149883 | rs204996 | AGER | C>T | 8374 | 46111 | 41.33 | 1.283e-10 | 0.9244 |
chr6:32108362 | Affx-28467842 | - | C>G | 8049 | 44393 | 41.04 | 1.492e-10 | 0.9233 |
chr6:31210866 | rs3134762 | - | T>C | 41783 | 207579 | 40.95 | 1.564e-10 | 1.041 |
chr11:89017961 | rs1126809 | TYR | G>A | 44812 | 222525 | 40.93 | 1.575e-10 | 1.041 |
chr6:31425985 | rs2596480 | - | C>T | 11253 | 61309 | 40.82 | 1.671e-10 | 0.9341 |
chr6:31386019 | rs9295990 | - | T>G | 11221 | 61121 | 40.66 | 1.813e-10 | 0.9342 |
chr6:31394700 | rs2516472 | - | A>G | 11234 | 61192 | 40.61 | 1.854e-10 | 0.9342 |
chr6:31206979 | rs2394895 | - | T>C | 41818 | 207763 | 40.55 | 1.915e-10 | 1.041 |
chr6:31218239 | rs3130424 | - | A>C | 41856 | 207953 | 40.38 | 2.089e-10 | 1.041 |
chr6:31417510 | rs2596460 | - | A>G | 11273 | 61386 | 40.33 | 2.14e-10 | 0.9346 |
chr6:31206920 | rs2394894 | - | T>C | 41802 | 207772 | 40.14 | 2.36e-10 | 1.041 |
chr6:31418022 | rs2596457 | - | A>G | 11281 | 61403 | 39.93 | 2.63e-10 | 0.9349 |
chr6:32092207 | rs1269851 | ATF6B | T>C | 7624 | 42089 | 39.82 | 2.791e-10 | 0.9226 |
chr16:89986117 | Affx-35293625 | MC1R | C>T | 16079 | 78112 | 39.54 | 3.211e-10 | 1.059 |
chr6:31916062 | rs512559 | AL645922.1 | A>G | 7571 | 41807 | 39.53 | 3.235e-10 | 0.9226 |
chr11:89011046 | rs1393350 | TYR | G>A | 44458 | 221274 | 39.37 | 3.512e-10 | 1.04 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr6:396321 | rs12203592 | IRF4 | C>T | 34597 | 60833 | 58.04 | 2.562e-14 | 1.06 |
chr5:33951693 | rs16891982 | SLC45A2 | G>C | 9993 | 20085 | 55.67 | 8.552e-14 | 0.9099 |
chr15:48426484 | rs1426654 | SLC24A5 | A>G | 3767 | 8000 | 54.03 | 1.975e-13 | 0.8633 |
chr10:12267086 | rs10906102 | CDC123 | T>C | 5126 | 10547 | 44.56 | 2.462e-11 | 0.8909 |
chr15:48392165 | rs1834640 | - | A>G | 4475 | 9253 | 42.43 | 7.331e-11 | 0.8866 |
chr6:421281 | rs62389423 | - | G>A | 28091 | 49476 | 42.01 | 9.078e-11 | 1.055 |
chr6:37145523 | rs10223418 | - | G>T | 1582 | 3529 | 41.02 | 1.508e-10 | 0.8232 |
chr2:211717706 | rs12995612 | - | C>G | 2218 | 4799 | 40.57 | 1.895e-10 | 0.8482 |
chr10:133971487 | rs7908899 | JAKMIP3 | G>A | 5505 | 11210 | 39.14 | 3.946e-10 | 0.9005 |
chr16:89986117 | Affx-35293625 | MC1R | C>T | 16240 | 28208 | 38.27 | 6.15e-10 | 1.066 |
chr7:103690444 | rs17158464 | - | C>T | 3289 | 6873 | 37.01 | 1.178e-09 | 0.8778 |
chr5:33958959 | rs28777 | SLC45A2 | A>C | 8544 | 17000 | 36.78 | 1.32e-09 | 0.9206 |
chr4:100239319 | rs1229984 | ADH1B | C>T | 4444 | 9111 | 35.93 | 2.042e-09 | 0.8947 |
chr12:3417813 | rs729914 | - | G>T | 2226 | 4768 | 35.71 | 2.292e-09 | 0.8569 |
chr6:170242949 | rs9396958 | - | T>C | 2167 | 4643 | 34.72 | 3.813e-09 | 0.8571 |
chr9:16507737 | rs7849139 | BNC2 | C>A | 9028 | 17881 | 34.6 | 4.049e-09 | 0.9247 |
chr16:89818732 | rs12931267 | FANCA | C>G | 16049 | 27969 | 33.47 | 7.25e-09 | 1.062 |
chr21:19126079 | rs7276293 | - | T>C | 4101 | 8411 | 33.44 | 7.356e-09 | 0.8944 |
chr7:103828290 | rs714519 | ORC5 | A>G | 2794 | 5863 | 33.25 | 8.1e-09 | 0.8748 |
chr13:72463541 | rs1460465 | - | A>G | 2230 | 4750 | 33.24 | 8.132e-09 | 0.8616 |
chr6:396321 | rs12203592 | IRF4 | C>T | 34209 | 60118 | 48.21 | 3.838e-12 | 1.055 |
chr6:421281 | rs62389423 | - | G>A | 27751 | 48812 | 36.12 | 1.854e-09 | 1.051 |
chr16:89986117 | Affx-35293625 | MC1R | C>T | 16079 | 27955 | 31.22 | 2.306e-08 | 1.06 |
chr2:202143928 | rs10931936 | CASP8 | C>T | 41304 | 73532 | 29.99 | 4.341e-08 | 1.04 |
chr6:32108362 | Affx-28467842 | - | C>G | 8049 | 15835 | 28.83 | 7.884e-08 | 0.9272 |
chr16:89755903 | rs258322 | CDK10 | G>A | 18226 | 31866 | 28.62 | 8.82e-08 | 1.054 |
chr16:90067184 | rs73283869 | - | G>A | 14950 | 26015 | 27.87 | 1.295e-07 | 1.059 |
chr16:89818732 | rs12931267 | FANCA | C>G | 15885 | 27691 | 27.74 | 1.386e-07 | 1.057 |
chr16:90067136 | rs78800020 | - | G>C | 15029 | 26156 | 27.74 | 1.386e-07 | 1.058 |
chr6:31379198 | rs2256028 | MICA | C>A | 20894 | 39886 | 27.3 | 1.739e-07 | 0.953 |
chr16:89687407 | rs2280374 | DPEP1 | C>T | 15596 | 27188 | 27.05 | 1.982e-07 | 1.057 |
chr2:202122995 | rs3769823 | CASP8 | G>A | 43534 | 77656 | 27.04 | 1.993e-07 | 1.038 |
chr6:31383848 | rs3094584 | - | G>A | 18630 | 35655 | 27.03 | 2.002e-07 | 0.951 |
chr6:32102231 | rs2555456 | - | C>T | 7619 | 14984 | 26.91 | 2.129e-07 | 0.9278 |
chr6:32092207 | rs1269851 | ATF6B | T>C | 7624 | 14992 | 26.87 | 2.173e-07 | 0.9279 |
chr6:32136930 | rs1269839 | PPT2-EGFL8 | G>T | 7629 | 14998 | 26.64 | 2.448e-07 | 0.9282 |
chr16:90093075 | rs77270200 | GAS8 | G>A | 16053 | 28022 | 26.6 | 2.505e-07 | 1.055 |
chr6:32132590 | rs2849013 | PPT2-EGFL8 | A>G | 7663 | 15063 | 26.56 | 2.56e-07 | 0.9284 |
chr6:32149883 | rs204996 | AGER | C>T | 8374 | 16400 | 26.53 | 2.592e-07 | 0.9312 |
chr16:90048395 | rs45610233 | - | C>T | 14248 | 24793 | 26.44 | 2.724e-07 | 1.058 |