Case | Control |
---|---|
71159 | 389035 |
An anomaly of the control or production of movement in the central nervous system. [HPO:probinson]
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr9:22124477 | rs10757278 | - | A>G | 73556 | 392544 | 52.17 | 5.095e-13 | 1.041 |
chr9:22125503 | rs1333049 | - | G>C | 73596 | 392842 | 50.2 | 1.388e-12 | 1.04 |
chr9:22098574 | rs4977574 | - | A>G | 74179 | 396242 | 49.81 | 1.695e-12 | 1.04 |
chr9:22096055 | rs10757274 | - | A>G | 74509 | 398043 | 49.68 | 1.813e-12 | 1.04 |
chr6:396321 | rs12203592 | IRF4 | C>T | 32185 | 169020 | 47.0 | 7.083e-12 | 1.048 |
chr9:22088260 | rs10757272 | - | C>T | 74338 | 397410 | 46.18 | 1.078e-11 | 1.039 |
chr6:161010118 | rs10455872 | LPA | A>G | 12056 | 61643 | 44.76 | 2.228e-11 | 1.072 |
chr9:22125347 | rs1333048 | - | A>C | 76144 | 407513 | 44.06 | 3.186e-11 | 1.038 |
chr6:160997118 | rs74617384 | LPA | A>T | 11718 | 60109 | 39.65 | 3.043e-10 | 1.068 |
chr2:26113913 | rs78404020 | - | A>G | 1881 | 11936 | 38.16 | 6.534e-10 | 0.8572 |
chr9:22115959 | rs2383207 | - | G>A | 70508 | 391531 | 38.15 | 6.555e-10 | 0.9659 |
chr15:48426484 | rs1426654 | SLC24A5 | A>G | 3917 | 23609 | 34.95 | 3.375e-09 | 0.9018 |
chr3:132009945 | rs13077557 | - | C>G | 4168 | 24973 | 32.8 | 1.023e-08 | 0.9074 |
chr9:22081850 | rs6475606 | - | C>T | 76068 | 408201 | 32.38 | 1.267e-08 | 1.032 |
chr6:421281 | rs62389423 | - | G>A | 26184 | 137852 | 31.97 | 1.563e-08 | 1.043 |
chr1:29783282 | rs6676357 | - | T>C | 1360 | 8694 | 30.28 | 3.737e-08 | 0.8513 |
chr18:77563334 | rs11665567 | - | G>A | 31911 | 168854 | 29.71 | 5.011e-08 | 1.038 |
chr6:170242949 | rs9396958 | - | T>C | 2250 | 13864 | 29.6 | 5.304e-08 | 0.8829 |
chr8:30847760 | rs2042074 | - | T>C | 59618 | 318815 | 29.41 | 5.864e-08 | 1.032 |
chr20:19214390 | rs6136658 | SLC24A3 | G>A | 1893 | 11782 | 29.11 | 6.85e-08 | 0.8743 |
chr6:396321 | rs12203592 | IRF4 | C>T | 31771 | 167144 | 50.52 | 1.181e-12 | 1.051 |
chr6:161010118 | rs10455872 | LPA | A>G | 11883 | 60867 | 45.95 | 1.21e-11 | 1.074 |
chr9:22124477 | rs10757278 | - | A>G | 69839 | 374267 | 44.39 | 2.684e-11 | 1.039 |
chr9:22125503 | rs1333049 | - | G>C | 69812 | 374106 | 43.85 | 3.539e-11 | 1.039 |
chr9:22098574 | rs4977574 | - | A>G | 70516 | 378210 | 43.04 | 5.354e-11 | 1.039 |
chr9:22096055 | rs10757274 | - | A>G | 70734 | 379419 | 42.86 | 5.871e-11 | 1.039 |
chr9:22088260 | rs10757272 | - | C>T | 70277 | 376929 | 42.42 | 7.363e-11 | 1.038 |
chr6:160997118 | rs74617384 | LPA | A>T | 11546 | 59342 | 40.63 | 1.838e-10 | 1.07 |
chr9:22125347 | rs1333048 | - | A>C | 72056 | 387085 | 38.89 | 4.494e-10 | 1.037 |
chr9:22115959 | rs2383207 | - | G>A | 67907 | 378114 | 36.93 | 1.222e-09 | 0.9655 |
chr6:421281 | rs62389423 | - | G>A | 25816 | 136049 | 35.55 | 2.49e-09 | 1.046 |
chr6:160922870 | rs117733303 | - | A>G | 2888 | 14096 | 31.46 | 2.04e-08 | 1.123 |
chr6:160961137 | rs3798220 | LPA | T>C | 2855 | 13927 | 31.36 | 2.145e-08 | 1.123 |
chr9:22081850 | rs6475606 | - | C>T | 69701 | 375061 | 30.05 | 4.216e-08 | 1.032 |
chr6:160848743 | rs9457925 | SLC22A3 | G>A | 2891 | 14154 | 29.9 | 4.551e-08 | 1.119 |
chr18:77563334 | rs11665567 | - | G>A | 30528 | 161978 | 28.95 | 7.426e-08 | 1.039 |
chr12:111910219 | rs10774625 | ATXN2 | G>A | 71366 | 384302 | 26.94 | 2.099e-07 | 1.03 |
chr12:111884608 | rs3184504 | SH2B3 | C>T | 69544 | 374449 | 26.75 | 2.314e-07 | 1.03 |
chr12:112072424 | rs11065987 | - | A>G | 60099 | 322918 | 25.76 | 3.867e-07 | 1.03 |
chr8:73889320 | rs9298210 | - | A>C | 66124 | 367396 | 25.39 | 4.682e-07 | 0.9712 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr6:161010118 | rs10455872 | LPA | A>G | 11883 | 19575 | 26.33 | 2.884e-07 | 1.064 |
chr1:31770944 | rs6679393 | ZCCHC17 | C>T | 54665 | 93292 | 24.73 | 6.612e-07 | 1.035 |
chr1:31710888 | rs12752761 | NKAIN1 | C>T | 53213 | 90827 | 23.98 | 9.733e-07 | 1.034 |
chr11:19189752 | rs11823088 | ZDHHC13 | A>G | 15287 | 25427 | 23.69 | 1.131e-06 | 1.054 |
chr9:22124477 | rs10757278 | - | A>G | 69839 | 119797 | 23.06 | 1.573e-06 | 1.032 |
chr6:160997118 | rs74617384 | LPA | A>T | 11546 | 19082 | 22.89 | 1.712e-06 | 1.061 |
chr9:22125503 | rs1333049 | - | G>C | 69812 | 119747 | 22.49 | 2.109e-06 | 1.032 |
chr6:160922870 | rs117733303 | - | A>G | 2888 | 4504 | 22.41 | 2.203e-06 | 1.121 |
chr6:160961137 | rs3798220 | LPA | T>C | 2855 | 4453 | 22.06 | 2.637e-06 | 1.12 |
chr1:31764713 | rs142762586 | SNRNP40 | CAAG>C | 53249 | 90972 | 21.97 | 2.771e-06 | 1.033 |
chr9:22098574 | rs4977574 | - | A>G | 70516 | 121039 | 21.96 | 2.785e-06 | 1.032 |
chr3:62704734 | rs116256340 | CADPS | C>T | 6924 | 11264 | 21.78 | 3.061e-06 | 1.076 |
chr9:22096055 | rs10757274 | - | A>G | 70734 | 121441 | 21.76 | 3.093e-06 | 1.032 |
chr9:22088260 | rs10757272 | - | C>T | 70277 | 120634 | 21.44 | 3.648e-06 | 1.031 |
chr13:29669523 | rs117185065 | MTUS2 | T>C | 3652 | 6990 | 21.41 | 3.704e-06 | 0.9087 |
chr6:160848743 | rs9457925 | SLC22A3 | G>A | 2891 | 4529 | 20.78 | 5.146e-06 | 1.116 |
chr1:31689088 | rs7544003 | NKAIN1 | C>T | 59305 | 101572 | 20.6 | 5.659e-06 | 1.031 |
chr9:22125347 | rs1333048 | - | A>C | 72056 | 123836 | 20.45 | 6.122e-06 | 1.031 |
chr21:42563324 | rs7278558 | BACE2 | C>T | 16977 | 28418 | 20.35 | 6.462e-06 | 1.048 |
chr12:111910219 | rs10774625 | ATXN2 | G>A | 71366 | 122584 | 20.29 | 6.654e-06 | 1.03 |