0011458

Case	Control
142263	317931

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds ratio
chr6:396321	rs12203592	IRF4	C>T	63740	137465	70.59	4.388e-17	1.046
chr6:32657436	rs3129716	-	T>C	44479	95156	70.13	5.566e-17	1.053
chr6:32659645	rs2856674	-	A>G	44701	95697	68.21	1.473e-16	1.053
chr6:32605884	rs2187668	HLA-DQA1	C>T	43793	93878	64.6	9.165e-16	1.052
chr6:32765585	rs9276731	-	G>T	35962	76657	64.29	1.071e-15	1.056
chr6:32603007	rs2040406	HLA-DQA1	A>G	53961	116188	62.58	2.554e-15	1.047
chr6:32751962	rs9276689	-	C>T	35744	76315	61.12	5.371e-15	1.055
chr6:32682812	rs9275602	-	C>A	58633	126777	57.18	3.981e-14	1.043
chr6:32666526	rs1794282	-	C>T	37710	80710	56.75	4.943e-14	1.051
chr6:32623150	rs3021302	-	T>C	50949	109879	56.38	5.961e-14	1.045
chr6:32628698	rs9273529	HLA-DQB1	C>T	76847	167210	54.18	1.827e-13	1.038
chr6:32290208	rs9268235	TSBP1	C>T	38698	82988	53.43	2.683e-13	1.049
chr6:32261252	rs7775397	TSBP1	T>G	38264	82033	53.28	2.885e-13	1.05
chr6:32631348	rs9274253	HLA-DQB1	G>A	76601	166730	53.13	3.115e-13	1.038
chr6:32345689	rs2894254	-	T>G	38085	81676	52.69	3.915e-13	1.049
chr6:32302382	rs1265757	TSBP1	C>T	38183	81888	52.56	4.166e-13	1.049
chr6:32325562	rs2395149	TSBP1	G>A	38234	81996	52.56	4.175e-13	1.049
chr6:32310863	rs2849018	TSBP1	T>C	38297	82146	52.32	4.726e-13	1.049
chr6:32333827	rs3129927	TSBP1	A>C	38266	82069	52.31	4.729e-13	1.049
chr6:32408497	rs3135394	HLA-DRA	A>G	38092	81720	51.59	6.852e-13	1.049
chr6:396321	rs12203592	IRF4	C>T	62986	135929	65.69	5.28e-16	1.045
chr6:32657436	rs3129716	-	T>C	42737	91488	63.13	1.939e-15	1.052
chr6:32659645	rs2856674	-	A>G	42932	91926	62.86	2.22e-15	1.052
chr6:32765585	rs9276731	-	G>T	35319	75288	61.3	4.898e-15	1.055
chr6:32682812	rs9275602	-	C>A	56918	122804	60.23	8.446e-15	1.045
chr6:32751962	rs9276689	-	C>T	34954	74600	58.99	1.585e-14	1.055
chr6:32605884	rs2187668	HLA-DQA1	C>T	42011	90106	58.34	2.208e-14	1.05
chr6:32603007	rs2040406	HLA-DQA1	A>G	51203	110249	57.05	4.255e-14	1.046
chr6:32666526	rs1794282	-	C>T	37338	79939	53.6	2.451e-13	1.05
chr6:32623150	rs3021302	-	T>C	48322	104196	51.7	6.462e-13	1.044
chr6:32290208	rs9268235	TSBP1	C>T	38309	82184	50.39	1.262e-12	1.048
chr6:32261252	rs7775397	TSBP1	T>G	37881	81241	50.19	1.392e-12	1.048
chr6:32345689	rs2894254	-	T>G	37700	80874	49.78	1.719e-12	1.048
chr6:32302382	rs1265757	TSBP1	C>T	37803	81098	49.55	1.936e-12	1.048
chr6:32325562	rs2395149	TSBP1	G>A	37851	81201	49.55	1.937e-12	1.048
chr6:32333827	rs3129927	TSBP1	A>C	37882	81267	49.35	2.138e-12	1.048
chr6:32310863	rs2849018	TSBP1	T>C	37891	81299	49.31	2.185e-12	1.048
chr6:32303692	rs1265754	TSBP1	T>A	37888	81309	48.75	2.908e-12	1.048
chr6:32408497	rs3135394	HLA-DRA	A>G	37709	80925	48.56	3.208e-12	1.048
chr6:32395726	rs3129843	-	A>G	37593	80727	47.65	5.101e-12	1.047

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds ratio
chr6:32623150	rs3021302	-	T>C	50949	16199	33.73	6.333e-09	1.059
chr6:32603007	rs2040406	HLA-DQA1	A>G	53961	17168	33.56	6.918e-09	1.057
chr6:32657436	rs3129716	-	T>C	44479	14082	32.92	9.585e-09	1.062
chr6:32605884	rs2187668	HLA-DQA1	C>T	43793	13872	32.06	1.493e-08	1.061
chr6:32659645	rs2856674	-	A>G	44701	14166	31.72	1.777e-08	1.06
chr6:32765585	rs9276731	-	G>T	35962	11338	30.0	4.315e-08	1.065
chr6:32751962	rs9276689	-	C>T	35744	11275	29.73	4.961e-08	1.065
chr6:32913246	rs1480380	AL645941.2	C>T	31863	10018	28.88	7.686e-08	1.067
chr2:37288592	rs2540991	HEATR5B	G>A	26374	9330	27.1	1.935e-07	0.9363
chr6:32666526	rs1794282	-	C>T	37710	11940	26.99	2.044e-07	1.06
chr6:32631348	rs9274253	HLA-DQB1	G>A	76601	24720	26.14	3.176e-07	1.044
chr6:32628698	rs9273529	HLA-DQB1	C>T	76847	24791	26.0	3.406e-07	1.044
chr13:87690507	rs116938106	-	G>A	8253	3051	24.76	6.499e-07	0.8985
chr6:32290208	rs9268235	TSBP1	C>T	38698	12292	24.62	6.965e-07	1.056
chr2:37065291	rs72785066	STRN	T>C	34267	11997	24.19	8.743e-07	0.9459
chr6:32333827	rs3129927	TSBP1	A>C	38266	12156	23.94	9.928e-07	1.056
chr6:32325562	rs2395149	TSBP1	G>A	38234	12151	23.74	1.103e-06	1.056
chr6:32395726	rs3129843	-	A>G	37974	12074	23.69	1.129e-06	1.056
chr6:32634467	rs3891175	HLA-DQB1	C>T	76352	24681	23.61	1.177e-06	1.042
chr6:32261252	rs7775397	TSBP1	T>G	38264	12159	23.6	1.186e-06	1.055
chr6:32657436	rs3129716	-	T>C	42737	13528	31.61	1.884e-08	1.062
chr6:32603007	rs2040406	HLA-DQA1	A>G	51203	16297	31.08	2.477e-08	1.057
chr6:32623150	rs3021302	-	T>C	48322	15372	31.01	2.571e-08	1.058
chr6:32659645	rs2856674	-	A>G	42932	13602	30.66	3.071e-08	1.061
chr6:32605884	rs2187668	HLA-DQA1	C>T	42011	13308	30.43	3.467e-08	1.061
chr6:32765585	rs9276731	-	G>T	35319	11147	28.3	1.039e-07	1.064
chr6:32751962	rs9276689	-	C>T	34954	11037	27.99	1.219e-07	1.063
chr6:32666526	rs1794282	-	C>T	37338	11824	26.41	2.759e-07	1.06
chr6:32317973	rs761188	TSBP1	A>G	107255	34863	26.21	3.061e-07	1.041
chr6:32300152	rs1076712	TSBP1	T>C	107069	34788	26.09	3.257e-07	1.041
chr6:32913246	rs1480380	AL645941.2	C>T	30200	9509	25.79	3.801e-07	1.065
chr6:32338695	rs3129943	TSBP1	A>G	76190	24589	25.54	4.339e-07	1.044
chr6:32628698	rs9273529	HLA-DQB1	C>T	73219	23606	25.27	4.99e-07	1.044
chr6:32317635	rs2076537	TSBP1	G>A	107269	34871	25.22	5.113e-07	1.04
chr2:37288592	rs2540991	HEATR5B	G>A	25894	9140	25.0	5.725e-07	0.9381
chr6:32315654	rs910050	TSBP1	G>C	107225	34849	25.0	5.744e-07	1.04
chr6:32631348	rs9274253	HLA-DQB1	G>A	72928	23528	24.96	5.845e-07	1.044
chr6:32316604	rs3117122	TSBP1	C>T	106539	34640	24.93	5.94e-07	1.04
chr6:32317859	Affx-28471855	TSBP1	T>C	106961	34776	24.8	6.371e-07	1.04
chr6:32306419	rs2273019	TSBP1	C>T	108430	35255	24.64	6.907e-07	1.039

Location

SNP

Gene

Ref>Alt

Alt in Case

Alt in Control

Chi-square

P-value

Odds ratio

chr6:32623150

rs3021302

-

T>C

50949

16199

33.73

6.333e-09

1.059

chr6:32603007

rs2040406

HLA-DQA1

A>G

53961

17168

33.56

6.918e-09

1.057

chr6:32657436

rs3129716

-

T>C

44479

14082

32.92

9.585e-09

1.062

chr6:32605884

rs2187668

HLA-DQA1

C>T

43793

13872

32.06

1.493e-08

1.061

chr6:32659645

rs2856674

-

A>G

44701

14166

31.72

1.777e-08

1.06

chr6:32765585

rs9276731

-

G>T

35962

11338

30.0

4.315e-08

1.065

chr6:32751962

rs9276689

-

C>T

35744

11275

29.73

4.961e-08

1.065

chr6:32913246

rs1480380

AL645941.2

C>T

31863

10018

28.88

7.686e-08

1.067

chr2:37288592

rs2540991

HEATR5B

G>A

26374

9330

27.1

1.935e-07

0.9363

chr6:32666526

rs1794282

-

C>T

37710

11940

26.99

2.044e-07

1.06

chr6:32631348

rs9274253

HLA-DQB1

G>A

76601

24720

26.14

3.176e-07

1.044

chr6:32628698

rs9273529

HLA-DQB1

C>T

76847

24791

26.0

3.406e-07

1.044

chr13:87690507

rs116938106

-

G>A

8253

3051

24.76

6.499e-07

0.8985

chr6:32290208

rs9268235

TSBP1

C>T

38698

12292

24.62

6.965e-07

1.056

chr2:37065291

rs72785066

STRN

T>C

34267

11997

24.19

8.743e-07

0.9459

chr6:32333827

rs3129927

TSBP1

A>C

38266

12156

23.94

9.928e-07

1.056

chr6:32325562

rs2395149

TSBP1

G>A

38234

12151

23.74

1.103e-06

1.056

chr6:32395726

rs3129843

-

A>G

37974

12074

23.69

1.129e-06

1.056

chr6:32634467

rs3891175

HLA-DQB1

C>T

76352

24681

23.61

1.177e-06

1.042

chr6:32261252

rs7775397

TSBP1

T>G

38264

12159

23.6

1.186e-06

1.055

chr6:32657436

rs3129716

-

T>C

42737

13528

31.61

1.884e-08

1.062

chr6:32603007

rs2040406

HLA-DQA1

A>G

51203

16297

31.08

2.477e-08

1.057

chr6:32623150

rs3021302

-

T>C

48322

15372

31.01

2.571e-08

1.058

chr6:32659645

rs2856674

-

A>G

42932

13602

30.66

3.071e-08

1.061

chr6:32605884

rs2187668

HLA-DQA1

C>T

42011

13308

30.43

3.467e-08

1.061

chr6:32765585

rs9276731

-

G>T

35319

11147

28.3

1.039e-07

1.064

chr6:32751962

rs9276689

-

C>T

34954

11037

27.99

1.219e-07

1.063

chr6:32666526

rs1794282

-

C>T

37338

11824

26.41

2.759e-07

1.06

chr6:32317973

rs761188

TSBP1

A>G

107255

34863

26.21

3.061e-07

1.041

chr6:32300152

rs1076712

TSBP1

T>C

107069

34788

26.09

3.257e-07

1.041

chr6:32913246

rs1480380

AL645941.2

C>T

30200

9509

25.79

3.801e-07

1.065

chr6:32338695

rs3129943

TSBP1

A>G

76190

24589

25.54

4.339e-07

1.044

chr6:32628698

rs9273529

HLA-DQB1

C>T

73219

23606

25.27

4.99e-07

1.044

chr6:32317635

rs2076537

TSBP1

G>A

107269

34871

25.22

5.113e-07

1.04

chr2:37288592

rs2540991

HEATR5B

G>A

25894

9140

25.0

5.725e-07

0.9381

chr6:32315654

rs910050

TSBP1

G>C

107225

34849

25.0

5.744e-07

1.04

chr6:32631348

rs9274253

HLA-DQB1

G>A

72928

23528

24.96

5.845e-07

1.044

chr6:32316604

rs3117122

TSBP1

C>T

106539

34640

24.93

5.94e-07

1.04

chr6:32317859

Affx-28471855

TSBP1

T>C

106961

34776

24.8

6.371e-07

1.04

chr6:32306419

rs2273019

TSBP1

C>T

108430

35255

24.64

6.907e-07

1.039

ID	Name	Top Correlation
ICD: K900	Coeliac disease	12/20
ICD: K921	Melaena	1/20
ICD: R11	Nausea and vomiting	1/20

ID	Name	Top Correlation
ICD-10: A020	Salmonella gastro-enteritis	0/20
ICD-10: A045	Campylobacter enteritis	0/20
ICD-10: A048	Other specified bacterial intestinal infections	0/20
ICD-10: A081	Acute gastro-enteropathy due to Norwalk agent	0/20
ICD-10: A084	Viral intestinal infection, unspecified	0/20
ICD-10: A099	Gastroenteritis and colitis of unspecified origin	0/20
ICD-10: A418	Other specified septicaemia	0/20
ICD-10: B80	Enterobiasis	0/20
ICD-10: C183	Hepatic flexure	0/20
ICD-10: C184	Transverse colon	0/20
ICD-10: C185	Splenic flexure	0/20
ICD-10: C186	Descending colon	0/20
ICD-10: C187	Sigmoid colon	0/20
ICD-10: C19	Malignant neoplasm of rectosigmoid junction	0/20
ICD-10: C671	Dome of bladder	0/20
ICD-10: C775	Intrapelvic lymph nodes	0/20
ICD-10: D123	Transverse colon	0/20
ICD-10: D124	Descending colon	0/20
ICD-10: D125	Sigmoid colon	0/20
ICD-10: D127	Rectosigmoid junction	0/20
ICD-10: D128	Rectum	0/20
ICD-10: D375	Rectum	0/20
ICD-10: D500	Iron deficiency anaemia secondary to blood loss (chronic)	0/20
ICD-10: D62	Acute posthaemorrhagic anaemia	0/20
ICD-10: D699	Haemorrhagic condition, unspecified	0/20
ICD-10: E46	Unspecified protein-energy malnutrition	0/20
ICD-10: H811	Benign paroxysmal vertigo	0/20
ICD-10: I842	Internal haemorrhoids without complication	0/20
ICD-10: I845	External haemorrhoids without complication	0/20
ICD-10: I846	Residual haemorrhoidal skin tags	0/20
ICD-10: I849	Unspecified haemorrhoids without complication	0/20
ICD-10: I859	Oesophageal varices without bleeding	0/20
ICD-10: K226	Gastro-oesophageal laceration-haemorrhage syndrome	0/20
ICD-10: K290	Acute haemorrhagic gastritis	0/20
ICD-10: K30	Dyspepsia	0/20
ICD-10: K314	Gastric diverticulum	0/20
ICD-10: K351	Acute appendicitis with peritoneal abscess	0/20
ICD-10: K358	Acute appendicitis, other and unspecified	0/20
ICD-10: K359	Acute appendicitis, unspecified	0/20
ICD-10: K36	Other appendicitis	0/20
ICD-10: K37	Unspecified appendicitis	0/20
ICD-10: K512	Ulcerative (chronic) proctitis	0/20
ICD-10: K513	Ulcerative (chronic) rectosigmoiditis	0/20
ICD-10: K552	Angiodysplasia of colon	0/20
ICD-10: K560	Paralytic ileus	0/20
ICD-10: K564	Other impaction of intestine	0/20
ICD-10: K571	Diverticular disease of small intestine without perforation or abscess	0/20
ICD-10: K572	Diverticular disease of large intestine with perforation and abscess	0/20
ICD-10: K573	Diverticular disease of large intestine without perforation or abscess	0/20
ICD-10: K578	Diverticular disease of intestine, part unspecified, with perforation and abscess	0/20
ICD-10: K579	Diverticular disease of intestine, part unspecified, without perforation or abscess	0/20
ICD-10: K580	Irritable bowel syndrome with diarrhoea	0/20
ICD-10: K590	Constipation	0/20
ICD-10: K591	Functional diarrhoea	0/20
ICD-10: K598	Other specified functional intestinal disorders	0/20
ICD-10: K599	Functional intestinal disorder, unspecified	0/20
ICD-10: K600	Acute anal fissure	0/20
ICD-10: K627	Radiation proctitis	0/20
ICD-10: K639	Disease of intestine, unspecified	0/20
ICD-10: K640	First degree haemorrhoids	0/20
ICD-10: K641	Second degree haemorrhoids	0/20
ICD-10: K642	Third degree haemorrhoids	0/20
ICD-10: K644	Residual haemorrhoidal skin tags	0/20
ICD-10: K648	Other specified haemorrhoids	0/20
ICD-10: K649	Haemorrhoids, unspecified	0/20
ICD-10: K650	Acute peritonitis	0/20
ICD-10: K904	Malabsorption due to intolerance, not elsewhere classified	0/20
ICD-10: K909	Intestinal malabsorption, unspecified	0/20
ICD-10: K920	Haematemesis	0/20
ICD-10: K922	Gastro-intestinal haemorrhage, unspecified	0/20
ICD-10: K929	Disease of digestive system, unspecified	0/20
ICD-10: M213	Wrist or foot drop (acquired)	0/20
ICD-10: N398	Other specified disorders of urinary system	0/20
ICD-10: N600	Solitary cyst of breast	0/20
ICD-10: N649	Disorder of breast, unspecified	0/20
ICD-10: O210	Mild hyperemesis gravidarum	0/20
ICD-10: O996	Diseases of the digestive system complicating pregnancy, childbirth and the puerperium	0/20
ICD-10: R000	Tachycardia, unspecified	0/20
ICD-10: R098	Other specified symptoms and signs involving the circulatory and respiratory systems	0/20
ICD-10: R100	Acute abdomen	0/20
ICD-10: R101	Pain localised to upper abdomen	0/20
ICD-10: R103	Pain localised to other parts of lower abdomen	0/20
ICD-10: R104	Other and unspecified abdominal pain	0/20
ICD-10: R12	Heartburn	0/20
ICD-10: R15	Faecal incontinence	0/20
ICD-10: R194	Change in bowel habit	0/20
ICD-10: R391	Other difficulties with micturition	0/20
ICD-10: R42	Dizziness and giddiness	0/20
ICD-10: R478	Other and unspecified speech disturbances	0/20
ICD-10: R500	Fever with chills	0/20
ICD-10: R630	Anorexia	0/20
ICD-10: T450	Antiallergic and antiemetic drugs	0/20
ICD-10: T885	Other complications of anaesthesia	0/20

Abdominal symptom

0011458

Normal Case/Contol ^ⓘ

Sibling Case/Control ^ⓘ

Links

Statistics

Top SNP Information

Associated Diseases ^ⓘ

Abdominal symptom

0011458

Normal Case/Contol ⓘ

Sibling Case/Control ⓘ

Links

Statistics

Top SNP Information Show Normal Table Show Sibling SNP

Associated Diseases ⓘ Shared SNP diseases No shared SNP diseases

Normal Case/Contol ^ⓘ

Sibling Case/Control ^ⓘ

Top SNP Information

Associated Diseases ^ⓘ