Case | Control |
---|---|
17728 | 442466 |
An entrapment neuropathy of the suprascapular nerve, presenting with shoulder weakness confined to the supraspinatus muscle (this muscle initiates shoulder abduction) or to the infraspinatus (this muscle externally rotates the arm), as well as with pain in the posterior part of the shoulder and upper periscapular region. [HPO:probinson]
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr1:159174683 | rs2814778 | ACKR1 | T>C | 1010 | 18367 | 91.67 | 1.022e-21 | 1.367 |
chr2:66725070 | rs12995572 | MEIS1 | G>C | 1328 | 25823 | 74.22 | 6.996e-18 | 1.279 |
chr23:64367019 | rs7064929 | - | G>A | 888 | 16678 | 68.38 | 1.35e-16 | 1.334 |
chr12:56755058 | rs4301822 | APOF | A>G | 669 | 11943 | 67.95 | 1.675e-16 | 1.39 |
chr15:45556163 | rs8023604 | SLC28A2 | T>C | 679 | 12232 | 65.07 | 7.217e-16 | 1.376 |
chr10:1411012 | rs12762472 | ADARB2 | G>C | 537 | 9352 | 62.96 | 2.115e-15 | 1.423 |
chr23:19215613 | rs5955734 | - | C>G | 1417 | 28608 | 61.16 | 5.262e-15 | 1.243 |
chr6:136480972 | rs9483910 | PDE7B | C>T | 1050 | 20320 | 60.68 | 6.723e-15 | 1.283 |
chr6:3185712 | rs7754077 | - | C>T | 930 | 17742 | 60.23 | 8.441e-15 | 1.302 |
chr18:9536315 | rs14336 | RALBP1 | A>C | 668 | 12199 | 58.6 | 1.934e-14 | 1.358 |
chr3:123429182 | rs820338 | MYLK | C>T | 878 | 16699 | 58.09 | 2.503e-14 | 1.305 |
chr17:29290106 | rs55861543 | - | C>T | 1018 | 19741 | 57.74 | 2.986e-14 | 1.28 |
chr10:105677897 | rs4387287 | STN1 | C>A | 6917 | 156679 | 57.65 | 3.129e-14 | 1.109 |
chr17:29350769 | rs8073072 | - | T>G | 1232 | 24474 | 57.28 | 3.789e-14 | 1.251 |
chr17:29375177 | rs6505228 | - | A>G | 1113 | 21881 | 56.31 | 6.205e-14 | 1.263 |
chr4:190837589 | rs6822336 | - | C>T | 586 | 10560 | 55.86 | 7.79e-14 | 1.375 |
chr10:105676465 | rs9420907 | STN1 | A>C | 5758 | 129492 | 55.45 | 9.585e-14 | 1.115 |
chr8:145639681 | rs1871534 | SLC39A4 | G>C | 897 | 17248 | 54.63 | 1.456e-13 | 1.291 |
chr11:67220175 | rs1638560 | GPR152 | A>G | 588 | 10644 | 54.56 | 1.507e-13 | 1.369 |
chr4:111516322 | rs113989538 | - | T>A | 665 | 12270 | 54.5 | 1.555e-13 | 1.344 |
chr1:169519049 | rs6025 | F5 | C>T | 995 | 20087 | 44.09 | 3.136e-11 | 1.244 |
chr10:105677897 | rs4387287 | STN1 | C>A | 5913 | 138214 | 28.3 | 1.041e-07 | 1.08 |
chr10:105676465 | rs9420907 | STN1 | A>C | 4981 | 115905 | 27.17 | 1.867e-07 | 1.085 |
chr2:136393658 | rs961360 | R3HDM1 | A>G | 4370 | 101654 | 23.51 | 1.242e-06 | 1.083 |
chr10:105657316 | rs10786775 | STN1 | C>G | 3648 | 84336 | 22.6 | 1.998e-06 | 1.089 |
chr10:105659826 | rs2487999 | STN1 | C>T | 3639 | 84259 | 22.02 | 2.691e-06 | 1.087 |
chr10:105631657 | rs35623220 | - | C>T | 4000 | 92990 | 21.74 | 3.125e-06 | 1.083 |
chr1:44289397 | rs37459 | AL451062.4 | A>G | 12064 | 311406 | 20.96 | 4.693e-06 | 0.949 |
chr1:234292878 | rs77250349 | SLC35F3 | T>G | 659 | 19658 | 20.68 | 5.415e-06 | 0.8339 |
chr3:191854129 | rs73191557 | - | A>C | 5156 | 121188 | 20.56 | 5.782e-06 | 1.072 |
chr17:43212963 | rs2291447 | ACBD4 | T>G | 16723 | 428170 | 20.05 | 7.532e-06 | 0.9525 |
chr9:124261314 | rs79173809 | - | G>T | 1752 | 48592 | 19.91 | 8.106e-06 | 0.8947 |
chr14:43123041 | rs4900462 | - | G>T | 15028 | 364558 | 19.86 | 8.318e-06 | 1.05 |
chr12:20627297 | rs80325674 | PDE3A | G>A | 814 | 17389 | 19.25 | 1.145e-05 | 1.172 |
chr4:6558458 | rs66497329 | PPP2R2C | T>C | 5645 | 148688 | 19.24 | 1.154e-05 | 0.9372 |
chr1:44290530 | rs37458 | AL451062.4 | A>G | 11894 | 307116 | 19.22 | 1.162e-05 | 0.9508 |
chr4:166647782 | rs35777076 | - | T>C | 3797 | 101458 | 19.04 | 1.279e-05 | 0.9265 |
chr3:58410554 | rs34579268 | PXK | C>T | 12713 | 327569 | 19.02 | 1.291e-05 | 0.9519 |
chr2:136389840 | rs3213943 | R3HDM1 | C>A | 4883 | 114877 | 18.58 | 1.633e-05 | 1.07 |
chr18:847307 | rs12373375 | - | A>G | 3324 | 77202 | 18.46 | 1.735e-05 | 1.083 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
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