0012437

Case	Control
13065	447129

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds ratio
chr6:32408497	rs3135394	HLA-DRA	A>G	4951	114861	899.3	1.376e-197	1.61
chr6:32666526	rs1794282	-	C>T	4889	113531	883.8	3.249e-194	1.607
chr6:32657436	rs3129716	-	T>C	5587	134048	874.3	3.703e-192	1.566
chr6:32659645	rs2856674	-	A>G	5605	134793	867.4	1.194e-190	1.563
chr6:32333827	rs3129927	TSBP1	A>C	4935	115400	863.6	7.935e-190	1.596
chr6:32395726	rs3129843	-	A>G	4902	114595	860.4	3.955e-189	1.596
chr6:32261252	rs7775397	TSBP1	T>G	4929	115368	857.5	1.732e-188	1.593
chr6:32345689	rs2894254	-	T>G	4907	114854	857.3	1.883e-188	1.595
chr6:32310863	rs2849018	TSBP1	T>C	4932	115511	854.9	6.17e-188	1.592
chr6:32303692	rs1265754	TSBP1	T>A	4929	115451	854.4	8.236e-188	1.592
chr6:32605884	rs2187668	HLA-DQA1	C>T	5487	132184	852.8	1.756e-187	1.563
chr6:32325562	rs2395149	TSBP1	G>A	4921	115309	852.7	1.928e-187	1.592
chr6:32302382	rs1265757	TSBP1	C>T	4907	115164	844.6	1.099e-185	1.589
chr6:32290208	rs9268235	TSBP1	C>T	4957	116729	838.9	1.923e-184	1.584
chr6:32194630	rs3096690	-	G>C	4989	117901	832.5	4.575e-183	1.579
chr6:32080191	rs1269852	TNXB	G>C	4848	115473	773.9	2.614e-170	1.562
chr6:32059867	rs1150753	TNXB	A>G	4873	116178	771.0	1.112e-169	1.559
chr6:32064726	rs1150752	TNXB	T>C	4867	116104	770.0	1.787e-169	1.559
chr6:32096001	rs3130288	ATF6B	C>A	4841	115586	764.7	2.571e-168	1.558
chr6:32284108	rs9268219	TSBP1	T>G	4586	108616	754.2	5.004e-166	1.569
chr6:32657436	rs3129716	-	T>C	5457	128768	857.6	1.633e-188	1.57
chr6:32659645	rs2856674	-	A>G	5475	129383	854.0	9.594e-188	1.567
chr6:32408497	rs3135394	HLA-DRA	A>G	4920	113714	844.2	1.322e-185	1.592
chr6:32605884	rs2187668	HLA-DQA1	C>T	5354	126763	839.2	1.645e-184	1.568
chr6:32666526	rs1794282	-	C>T	4857	112420	827.4	6.065e-182	1.588
chr6:32333827	rs3129927	TSBP1	A>C	4903	114246	807.7	1.156e-177	1.577
chr6:32395726	rs3129843	-	A>G	4870	113450	805.5	3.474e-177	1.578
chr6:32345689	rs2894254	-	T>G	4877	113697	804.3	6.317e-177	1.577
chr6:32261252	rs7775397	TSBP1	T>G	4898	114224	803.3	1.045e-176	1.575
chr6:32303692	rs1265754	TSBP1	T>A	4898	114299	801.0	3.214e-176	1.574
chr6:32310863	rs2849018	TSBP1	T>C	4897	114293	799.1	8.282e-176	1.574
chr6:32325562	rs2395149	TSBP1	G>A	4890	114162	798.8	9.721e-176	1.574
chr6:32302382	rs1265757	TSBP1	C>T	4876	114025	790.5	6.326e-174	1.571
chr6:32290208	rs9268235	TSBP1	C>T	4925	115568	785.4	8.023e-173	1.566
chr6:32194630	rs3096690	-	G>C	4955	116522	783.3	2.271e-172	1.564
chr6:32080191	rs1269852	TNXB	G>C	4819	114374	723.0	2.981e-159	1.544
chr6:32059867	rs1150753	TNXB	A>G	4844	115058	720.5	1.064e-158	1.541
chr6:32623150	rs3021302	-	T>C	5909	146609	720.2	1.189e-158	1.495
chr6:32064726	rs1150752	TNXB	T>C	4838	114986	719.0	2.211e-158	1.541
chr6:32603007	rs2040406	HLA-DQA1	A>G	6212	155240	718.8	2.453e-158	1.484

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds ratio
chr6:32408497	rs3135394	HLA-DRA	A>G	4951	56697	875.4	2.193e-192	1.615
chr6:32666526	rs1794282	-	C>T	4889	56059	859.2	7.366e-189	1.611
chr6:32657436	rs3129716	-	T>C	5587	66368	840.3	9.412e-185	1.565
chr6:32395726	rs3129843	-	A>G	4902	56586	837.2	4.435e-184	1.601
chr6:32333827	rs3129927	TSBP1	A>C	4935	57030	836.8	5.454e-184	1.599
chr6:32659645	rs2856674	-	A>G	5605	66704	835.8	8.757e-184	1.563
chr6:32345689	rs2894254	-	T>G	4907	56747	831.0	9.858e-183	1.598
chr6:32261252	rs7775397	TSBP1	T>G	4929	57029	829.9	1.724e-182	1.596
chr6:32303692	rs1265754	TSBP1	T>A	4929	57045	828.6	3.233e-182	1.595
chr6:32310863	rs2849018	TSBP1	T>C	4932	57084	827.8	4.919e-182	1.595
chr6:32325562	rs2395149	TSBP1	G>A	4921	56981	826.5	9.428e-182	1.595
chr6:32605884	rs2187668	HLA-DQA1	C>T	5487	65352	825.6	1.469e-181	1.565
chr6:32302382	rs1265757	TSBP1	C>T	4907	56910	818.5	5.081e-180	1.592
chr6:32290208	rs9268235	TSBP1	C>T	4957	57722	811.2	2.027e-178	1.586
chr6:32194630	rs3096690	-	G>C	4989	58292	804.9	4.592e-177	1.581
chr6:32080191	rs1269852	TNXB	G>C	4848	57024	753.5	6.95e-166	1.566
chr6:32059867	rs1150753	TNXB	A>G	4873	57376	750.5	3.203e-165	1.563
chr6:32064726	rs1150752	TNXB	T>C	4867	57343	749.1	6.157e-165	1.563
chr6:32096001	rs3130288	ATF6B	C>A	4841	57055	745.8	3.222e-164	1.563
chr6:31892484	rs497309	C2	A>C	4894	57935	734.4	1.011e-161	1.554
chr6:32657436	rs3129716	-	T>C	5457	63691	825.6	1.459e-181	1.57
chr6:32408497	rs3135394	HLA-DRA	A>G	4920	56091	822.6	6.488e-181	1.597
chr6:32659645	rs2856674	-	A>G	5475	63990	822.5	6.848e-181	1.568
chr6:32605884	rs2187668	HLA-DQA1	C>T	5354	62609	813.5	6.116e-179	1.571
chr6:32666526	rs1794282	-	C>T	4857	55479	804.6	5.392e-177	1.593
chr6:32395726	rs3129843	-	A>G	4870	55982	784.4	1.308e-172	1.583
chr6:32333827	rs3129927	TSBP1	A>C	4903	56422	783.2	2.372e-172	1.58
chr6:32345689	rs2894254	-	T>G	4877	56136	780.3	1.056e-171	1.58
chr6:32261252	rs7775397	TSBP1	T>G	4898	56424	778.2	3.003e-171	1.578
chr6:32303692	rs1265754	TSBP1	T>A	4898	56437	777.4	4.33e-171	1.578
chr6:32325562	rs2395149	TSBP1	G>A	4890	56375	775.0	1.495e-170	1.577
chr6:32310863	rs2849018	TSBP1	T>C	4897	56437	774.9	1.565e-170	1.577
chr6:32302382	rs1265757	TSBP1	C>T	4876	56309	766.7	9.179e-169	1.574
chr6:32290208	rs9268235	TSBP1	C>T	4925	57110	760.1	2.599e-167	1.568
chr6:32194630	rs3096690	-	G>C	4955	57584	757.0	1.186e-166	1.565
chr6:32080191	rs1269852	TNXB	G>C	4819	56442	704.7	2.802e-155	1.548
chr6:31892484	rs497309	C2	A>C	4853	56906	703.5	5.251e-155	1.545
chr6:32059867	rs1150753	TNXB	A>G	4844	56787	701.9	1.18e-154	1.545
chr6:32064726	rs1150752	TNXB	T>C	4838	56753	700.2	2.773e-154	1.545
chr6:31918860	rs1270942	AL645922.1	A>G	4854	56971	699.6	3.629e-154	1.544

Location

SNP

Gene

Ref>Alt

Alt in Case

Alt in Control

Chi-square

P-value

Odds ratio

chr6:32408497

rs3135394

HLA-DRA

A>G

4951

56697

875.4

2.193e-192

1.615

chr6:32666526

rs1794282

-

C>T

4889

56059

859.2

7.366e-189

1.611

chr6:32657436

rs3129716

-

T>C

5587

66368

840.3

9.412e-185

1.565

chr6:32395726

rs3129843

-

A>G

4902

56586

837.2

4.435e-184

1.601

chr6:32333827

rs3129927

TSBP1

A>C

4935

57030

836.8

5.454e-184

1.599

chr6:32659645

rs2856674

-

A>G

5605

66704

835.8

8.757e-184

1.563

chr6:32345689

rs2894254

-

T>G

4907

56747

831.0

9.858e-183

1.598

chr6:32261252

rs7775397

TSBP1

T>G

4929

57029

829.9

1.724e-182

1.596

chr6:32303692

rs1265754

TSBP1

T>A

4929

57045

828.6

3.233e-182

1.595

chr6:32310863

rs2849018

TSBP1

T>C

4932

57084

827.8

4.919e-182

1.595

chr6:32325562

rs2395149

TSBP1

G>A

4921

56981

826.5

9.428e-182

1.595

chr6:32605884

rs2187668

HLA-DQA1

C>T

5487

65352

825.6

1.469e-181

1.565

chr6:32302382

rs1265757

TSBP1

C>T

4907

56910

818.5

5.081e-180

1.592

chr6:32290208

rs9268235

TSBP1

C>T

4957

57722

811.2

2.027e-178

1.586

chr6:32194630

rs3096690

-

G>C

4989

58292

804.9

4.592e-177

1.581

chr6:32080191

rs1269852

TNXB

G>C

4848

57024

753.5

6.95e-166

1.566

chr6:32059867

rs1150753

TNXB

A>G

4873

57376

750.5

3.203e-165

1.563

chr6:32064726

rs1150752

TNXB

T>C

4867

57343

749.1

6.157e-165

1.563

chr6:32096001

rs3130288

ATF6B

C>A

4841

57055

745.8

3.222e-164

1.563

chr6:31892484

rs497309

C2

A>C

4894

57935

734.4

1.011e-161

1.554

chr6:32657436

rs3129716

-

T>C

5457

63691

825.6

1.459e-181

1.57

chr6:32408497

rs3135394

HLA-DRA

A>G

4920

56091

822.6

6.488e-181

1.597

chr6:32659645

rs2856674

-

A>G

5475

63990

822.5

6.848e-181

1.568

chr6:32605884

rs2187668

HLA-DQA1

C>T

5354

62609

813.5

6.116e-179

1.571

chr6:32666526

rs1794282

-

C>T

4857

55479

804.6

5.392e-177

1.593

chr6:32395726

rs3129843

-

A>G

4870

55982

784.4

1.308e-172

1.583

chr6:32333827

rs3129927

TSBP1

A>C

4903

56422

783.2

2.372e-172

1.58

chr6:32345689

rs2894254

-

T>G

4877

56136

780.3

1.056e-171

1.58

chr6:32261252

rs7775397

TSBP1

T>G

4898

56424

778.2

3.003e-171

1.578

chr6:32303692

rs1265754

TSBP1

T>A

4898

56437

777.4

4.33e-171

1.578

chr6:32325562

rs2395149

TSBP1

G>A

4890

56375

775.0

1.495e-170

1.577

chr6:32310863

rs2849018

TSBP1

T>C

4897

56437

774.9

1.565e-170

1.577

chr6:32302382

rs1265757

TSBP1

C>T

4876

56309

766.7

9.179e-169

1.574

chr6:32290208

rs9268235

TSBP1

C>T

4925

57110

760.1

2.599e-167

1.568

chr6:32194630

rs3096690

-

G>C

4955

57584

757.0

1.186e-166

1.565

chr6:32080191

rs1269852

TNXB

G>C

4819

56442

704.7

2.802e-155

1.548

chr6:31892484

rs497309

C2

A>C

4853

56906

703.5

5.251e-155

1.545

chr6:32059867

rs1150753

TNXB

A>G

4844

56787

701.9

1.18e-154

1.545

chr6:32064726

rs1150752

TNXB

T>C

4838

56753

700.2

2.773e-154

1.545

chr6:31918860

rs1270942

AL645922.1

A>G

4854

56971

699.6

3.629e-154

1.544

ID	Name	Top Correlation
ICD-10: C01	Malignant neoplasm of base of tongue	0/20
ICD-10: C183	Hepatic flexure	0/20
ICD-10: C23	Malignant neoplasm of gallbladder	0/20
ICD-10: C80	Malignant neoplasm without specification of site	0/20
ICD-10: E804	Gilbert's syndrome	0/20
ICD-10: J180	Bronchopneumonia, unspecified	0/20
ICD-10: K750	Abscess of liver	0/20
ICD-10: K800	Calculus of gallbladder with acute cholecystitis	0/20
ICD-10: K808	Other cholelithiasis	0/20
ICD-10: K810	Acute cholecystitis	0/20
ICD-10: K811	Chronic cholecystitis	0/20
ICD-10: K819	Cholecystitis, unspecified	0/20
ICD-10: K821	Hydrops of gallbladder	0/20
ICD-10: K822	Perforation of gallbladder	0/20
ICD-10: K824	Cholesterolosis of gallbladder	0/20
ICD-10: K828	Other specified diseases of gallbladder	0/20
ICD-10: K829	Disease of gallbladder, unspecified	0/20
ICD-10: O996	Diseases of the digestive system complicating pregnancy, childbirth and the puerperium	0/20

Abnormal gallbladder morphology

0012437

Normal Case/Contol ^ⓘ

Sibling Case/Control ^ⓘ

Links

Statistics

Phenotype Definition

Top SNP Information

Associated Diseases ^ⓘ

Abnormal gallbladder morphology

0012437

Normal Case/Contol ⓘ

Sibling Case/Control ⓘ

Links

Statistics

Phenotype Definition

Top SNP Information Show Normal Table Show Sibling SNP

Associated Diseases ⓘ Shared SNP diseases No shared SNP diseases

Normal Case/Contol ^ⓘ

Sibling Case/Control ^ⓘ

Top SNP Information

Associated Diseases ^ⓘ