Case | Control |
---|---|
3688 | 456506 |
A deviation from normal range of the erythrocyte sedimentation rate (ESR), a test that measures the distance that erythrocytes have fallen after one hour in a vertical column of anticoagulated blood under the influence of gravity. The ESR is a nonspecific finding. An elevation may indicate inflammation or may be caused by any condition that elevates fibrinogen. A decreased ESR may be seen in polycythemia or in certain blood diseases in which red blood cells have an irregular or smaller shape that causes slower settling. [PMID:10524488]
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr6:32577973 | rs532965 | - | T>G | 1930 | 178607 | 211.5 | 6.576e-48 | 1.465 |
chr6:32583357 | rs6931277 | - | A>T | 1896 | 174796 | 207.0 | 6.071e-47 | 1.464 |
chr6:32582650 | rs3104413 | - | C>G | 1913 | 177156 | 205.9 | 1.094e-46 | 1.46 |
chr6:32607376 | rs34250758 | HLA-DQA1 | G>A | 1979 | 188284 | 187.7 | 9.969e-43 | 1.43 |
chr6:32577380 | rs660895 | - | A>G | 2102 | 201545 | 182.7 | 1.242e-41 | 1.412 |
chr6:32581973 | rs521539 | - | G>A | 2104 | 201693 | 182.0 | 1.772e-41 | 1.411 |
chr6:32379295 | rs9268515 | - | G>C | 1876 | 178494 | 167.5 | 2.558e-38 | 1.409 |
chr6:32303848 | rs28361060 | TSBP1 | G>A | 2151 | 211709 | 154.2 | 2.089e-35 | 1.37 |
chr6:32333341 | rs9268362 | TSBP1 | A>G | 2154 | 212257 | 152.6 | 4.787e-35 | 1.368 |
chr6:32282854 | rs6910071 | TSBP1 | A>G | 2144 | 211456 | 151.6 | 7.912e-35 | 1.367 |
chr6:32257284 | rs9268145 | TSBP1 | T>G | 2144 | 211484 | 150.3 | 1.476e-34 | 1.366 |
chr6:32681483 | rs7454108 | - | T>C | 1082 | 97179 | 129.4 | 5.593e-30 | 1.452 |
chr6:32681530 | rs3957146 | - | T>C | 1082 | 97168 | 129.0 | 6.667e-30 | 1.451 |
chr6:32682019 | rs3998159 | - | A>C | 1086 | 97775 | 128.9 | 7.177e-30 | 1.45 |
chr6:32402778 | rs9268614 | - | T>G | 2134 | 214324 | 127.7 | 1.301e-29 | 1.333 |
chr6:32387809 | rs2395163 | - | T>C | 2100 | 210683 | 127.5 | 1.415e-29 | 1.335 |
chr6:32682429 | rs9275599 | - | C>T | 1037 | 92723 | 127.3 | 1.573e-29 | 1.457 |
chr6:32667850 | rs9275356 | - | C>G | 1080 | 97256 | 127.1 | 1.798e-29 | 1.447 |
chr6:32371915 | rs3793127 | BTNL2 | C>T | 2107 | 211257 | 126.9 | 1.933e-29 | 1.334 |
chr6:32654714 | rs9275184 | - | T>C | 1067 | 96189 | 126.5 | 2.39e-29 | 1.449 |
chr6:32577973 | rs532965 | - | T>G | 1892 | 172775 | 217.0 | 4.086e-49 | 1.481 |
chr6:32582650 | rs3104413 | - | C>G | 1876 | 171318 | 212.6 | 3.737e-48 | 1.477 |
chr6:32583357 | rs6931277 | - | A>T | 1858 | 169098 | 211.1 | 7.917e-48 | 1.478 |
chr6:32607376 | rs34250758 | HLA-DQA1 | G>A | 1937 | 181353 | 196.9 | 1.006e-44 | 1.451 |
chr6:32577380 | rs660895 | - | A>G | 2044 | 192923 | 189.6 | 3.834e-43 | 1.431 |
chr6:32581973 | rs521539 | - | G>A | 2044 | 193051 | 187.8 | 9.481e-43 | 1.428 |
chr6:32379295 | rs9268515 | - | G>C | 1852 | 174334 | 170.8 | 4.961e-39 | 1.42 |
chr6:32303848 | rs28361060 | TSBP1 | G>A | 2116 | 207121 | 150.9 | 1.103e-34 | 1.372 |
chr6:32333341 | rs9268362 | TSBP1 | A>G | 2119 | 207663 | 149.3 | 2.447e-34 | 1.37 |
chr6:32282854 | rs6910071 | TSBP1 | A>G | 2109 | 206871 | 147.9 | 5.115e-34 | 1.368 |
chr6:32257284 | rs9268145 | TSBP1 | T>G | 2108 | 206887 | 146.5 | 1.026e-33 | 1.367 |
chr6:32387809 | rs2395163 | - | T>C | 2045 | 201784 | 135.3 | 2.867e-31 | 1.354 |
chr6:32402778 | rs9268614 | - | T>G | 2075 | 205044 | 135.0 | 3.221e-31 | 1.352 |
chr6:32371915 | rs3793127 | BTNL2 | C>T | 2053 | 202601 | 134.1 | 5.246e-31 | 1.351 |
chr6:32375973 | rs3763309 | - | C>A | 2046 | 202341 | 132.7 | 1.072e-30 | 1.35 |
chr6:32681483 | rs7454108 | - | T>C | 1057 | 93480 | 132.7 | 1.03e-30 | 1.466 |
chr6:32681530 | rs3957146 | - | T>C | 1057 | 93470 | 132.6 | 1.114e-30 | 1.466 |
chr6:32682019 | rs3998159 | - | A>C | 1060 | 93963 | 132.3 | 1.301e-30 | 1.465 |
chr6:32667850 | rs9275356 | - | C>G | 1055 | 93558 | 130.6 | 3.084e-30 | 1.462 |
chr6:32654714 | rs9275184 | - | T>C | 1042 | 92574 | 129.3 | 5.805e-30 | 1.463 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr6:32577973 | rs532965 | - | T>G | 1930 | 92356 | 198.9 | 3.595e-45 | 1.451 |
chr6:32583357 | rs6931277 | - | A>T | 1896 | 90371 | 194.8 | 2.86e-44 | 1.45 |
chr6:32582650 | rs3104413 | - | C>G | 1913 | 91570 | 193.8 | 4.714e-44 | 1.446 |
chr6:32607376 | rs34250758 | HLA-DQA1 | G>A | 1979 | 97280 | 177.2 | 1.94e-40 | 1.418 |
chr6:32577380 | rs660895 | - | A>G | 2102 | 104177 | 171.4 | 3.695e-39 | 1.399 |
chr6:32581973 | rs521539 | - | G>A | 2104 | 104238 | 170.8 | 4.917e-39 | 1.398 |
chr6:32379295 | rs9268515 | - | G>C | 1876 | 91993 | 160.8 | 7.664e-37 | 1.402 |
chr6:32303848 | rs28361060 | TSBP1 | G>A | 2151 | 109273 | 145.4 | 1.714e-33 | 1.36 |
chr6:32333341 | rs9268362 | TSBP1 | A>G | 2154 | 109511 | 144.3 | 3.036e-33 | 1.358 |
chr6:32282854 | rs6910071 | TSBP1 | A>G | 2144 | 109138 | 143.0 | 5.799e-33 | 1.357 |
chr6:32257284 | rs9268145 | TSBP1 | T>G | 2144 | 109087 | 142.5 | 7.734e-33 | 1.356 |
chr6:32371915 | rs3793127 | BTNL2 | C>T | 2107 | 108733 | 122.3 | 1.973e-28 | 1.328 |
chr6:32402778 | rs9268614 | - | T>G | 2134 | 110381 | 122.3 | 2.002e-28 | 1.327 |
chr6:32387809 | rs2395163 | - | T>C | 2100 | 108532 | 122.0 | 2.319e-28 | 1.328 |
chr6:32375973 | rs3763309 | - | C>A | 2101 | 108607 | 121.5 | 2.981e-28 | 1.327 |
chr6:32681483 | rs7454108 | - | T>C | 1082 | 50358 | 120.6 | 4.761e-28 | 1.436 |
chr6:32681530 | rs3957146 | - | T>C | 1082 | 50352 | 120.3 | 5.558e-28 | 1.435 |
chr6:32682019 | rs3998159 | - | A>C | 1086 | 50654 | 120.3 | 5.534e-28 | 1.434 |
chr6:32682429 | rs9275599 | - | C>T | 1037 | 48039 | 118.9 | 1.096e-27 | 1.441 |
chr6:32667850 | rs9275356 | - | C>G | 1080 | 50395 | 118.4 | 1.425e-27 | 1.431 |
chr6:32577973 | rs532965 | - | T>G | 1892 | 89202 | 201.3 | 1.065e-45 | 1.462 |
chr6:32582650 | rs3104413 | - | C>G | 1876 | 88420 | 197.3 | 7.996e-45 | 1.459 |
chr6:32583357 | rs6931277 | - | A>T | 1858 | 87287 | 196.0 | 1.573e-44 | 1.46 |
chr6:32607376 | rs34250758 | HLA-DQA1 | G>A | 1937 | 93601 | 182.6 | 1.324e-41 | 1.433 |
chr6:32577380 | rs660895 | - | A>G | 2044 | 99545 | 175.5 | 4.628e-40 | 1.414 |
chr6:32581973 | rs521539 | - | G>A | 2044 | 99596 | 173.9 | 1.043e-39 | 1.412 |
chr6:32379295 | rs9268515 | - | G>C | 1852 | 89713 | 161.3 | 5.885e-37 | 1.409 |
chr6:32303848 | rs28361060 | TSBP1 | G>A | 2116 | 106755 | 139.5 | 3.472e-32 | 1.358 |
chr6:32333341 | rs9268362 | TSBP1 | A>G | 2119 | 106987 | 138.4 | 5.99e-32 | 1.356 |
chr6:32282854 | rs6910071 | TSBP1 | A>G | 2109 | 106618 | 136.7 | 1.404e-31 | 1.354 |
chr6:32257284 | rs9268145 | TSBP1 | T>G | 2108 | 106559 | 136.0 | 1.963e-31 | 1.353 |
chr6:32387809 | rs2395163 | - | T>C | 2045 | 103668 | 128.3 | 9.431e-30 | 1.345 |
chr6:32371915 | rs3793127 | BTNL2 | C>T | 2053 | 103984 | 128.3 | 9.753e-30 | 1.344 |
chr6:32402778 | rs9268614 | - | T>G | 2075 | 105309 | 128.3 | 9.42e-30 | 1.343 |
chr6:32375973 | rs3763309 | - | C>A | 2046 | 103868 | 126.7 | 2.116e-29 | 1.342 |
chr6:32681483 | rs7454108 | - | T>C | 1057 | 48337 | 122.6 | 1.675e-28 | 1.447 |
chr6:32681530 | rs3957146 | - | T>C | 1057 | 48333 | 122.5 | 1.799e-28 | 1.447 |
chr6:32682019 | rs3998159 | - | A>C | 1060 | 48565 | 122.5 | 1.778e-28 | 1.447 |
chr6:32376348 | rs3763312 | - | G>A | 2029 | 103309 | 121.9 | 2.463e-28 | 1.336 |
chr6:32667850 | rs9275356 | - | C>G | 1055 | 48378 | 120.6 | 4.746e-28 | 1.443 |
ID | Name | Top Correlation |
---|---|---|
ICD: M316 | Other giant cell arteritis | 13/20 |
ICD: M353 | Polymyalgia rheumatica | 17/20 |
ID | Name | Top Correlation |
---|---|---|
ICD-10: M060 | Seronegative rheumatoid arthritis | 0/20 |
ICD-10: R071 | Chest pain on breathing | 0/20 |
ICD-10: R700 | Elevated erythrocyte sedimentation rate | 0/20 |