0025439

Case	Control
22916	437278

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds ratio
chr10:49451051	rs1623017	FRMPD2	C>A	1027	15973	37.92	7.365e-10	1.221
chr12:132549300	rs7136109	EP400	A>G	663	9967	33.44	7.343e-09	1.262
chr18:35094265	rs1941943	CELF4	T>C	11822	213898	28.88	7.709e-08	1.06
chr23:64367019	rs7064929	-	G>A	1048	16518	28.1	1.152e-07	1.186
chr1:161388960	rs4326638	-	C>T	22104	429919	27.97	1.231e-07	0.9519
chr6:108659486	rs4326264	AFG1L	C>T	879	13870	27.82	1.334e-07	1.203
chr3:188694749	rs710493	TPRG1	A>G	2380	40458	27.14	1.892e-07	1.119
chr23:67891077	rs7886230	STARD8	T>C	2226	37207	26.08	3.278e-07	1.122
chr23:36258594	rs7879188	CFAP47	G>A	2877	48730	25.89	3.608e-07	1.107
chr23:67645007	rs5919559	OPHN1	A>G	4705	81590	25.82	3.75e-07	1.085
chr23:53347028	rs1547218	IQSEC2	T>C	2215	37038	25.67	4.041e-07	1.121
chr23:111065460	rs3027743	TRPC5	T>C	1957	32512	25.12	5.376e-07	1.127
chr13:19671629	rs35021688	-	C>T	3220	55900	24.47	7.555e-07	1.097
chr18:54938896	rs7232310	-	T>C	13298	242154	24.38	7.903e-07	1.053
chr3:178982869	rs1468923	KCNMB3	G>A	15895	291137	24.27	8.352e-07	1.05
chr4:60707711	rs12499997	-	C>T	13101	257443	24.12	9.05e-07	0.9499
chr6:108602696	rs9486843	-	C>T	834	13283	24.06	9.33e-07	1.193
chr7:8151296	rs73674818	-	T>C	1884	31804	24.06	9.36e-07	1.126
chr18:9536315	rs14336	RALBP1	A>C	766	12101	23.86	1.037e-06	1.201
chr23:110494841	rs12013711	CAPN6	C>G	1789	29700	23.35	1.349e-06	1.128
chr3:132058350	rs11706011	ACP3	T>A	7623	137717	26.0	3.412e-07	1.068
chr18:54920558	rs4800968	-	T>C	11157	204378	23.66	1.148e-06	1.056
chr18:54938896	rs7232310	-	T>C	12060	221152	23.46	1.275e-06	1.054
chr1:161388960	rs4326638	-	C>T	20992	410850	22.77	1.828e-06	0.9551
chr18:54943951	rs2193280	-	A>G	11481	210593	22.18	2.477e-06	1.054
chr13:94799771	rs1544088	GPC6	A>G	11307	224071	21.12	4.317e-06	0.9502
chr4:60707711	rs12499997	-	C>T	12584	248844	20.84	4.993e-06	0.9522
chr18:64709287	rs76833586	-	T>G	636	14562	20.53	5.863e-06	0.8314
chr11:2294715	rs11022045	-	C>T	3435	60735	20.26	6.744e-06	1.086
chr6:5379185	rs41504146	FARS2	T>G	2561	44775	19.85	8.376e-06	1.098
chr3:173076822	rs34569148	-	G>A	8920	163030	19.56	9.772e-06	1.055
chr22:40820151	rs5757949	MRTFA	T>C	14148	261573	19.35	1.089e-05	1.047
chr18:51193612	rs9947427	-	T>C	16597	307783	19.32	1.104e-05	1.045
chr16:23887804	rs73537082	PRKCB	A>G	1515	32377	19.3	1.118e-05	0.8892
chr12:107940359	rs117553123	BTBD11	C>T	842	18717	19.21	1.171e-05	0.8558
chr18:55027333	rs112792874	ST8SIA3	CG>C	7040	141130	19.17	1.193e-05	0.9435
chr9:3421300	rs13295925	RFX3	G>A	4543	92282	18.76	1.481e-05	0.9329
chr7:47406661	rs2462624	TNS3	T>C	8138	162373	18.6	1.613e-05	0.9474
chr3:132099515	rs11924446	-	A>C	8694	158937	18.53	1.669e-05	1.054
chr10:59212316	rs11005802	-	C>T	7894	143930	18.53	1.672e-05	1.056

Location

SNP

Gene

Ref>Alt

Alt in Case

Alt in Control

Chi-square

P-value

Odds ratio

chr10:49451051

rs1623017

FRMPD2

C>A

1027

15973

37.92

7.365e-10

1.221

chr12:132549300

rs7136109

EP400

A>G

663

9967

33.44

7.343e-09

1.262

chr18:35094265

rs1941943

CELF4

T>C

11822

213898

28.88

7.709e-08

1.06

chr23:64367019

rs7064929

-

G>A

1048

16518

28.1

1.152e-07

1.186

chr1:161388960

rs4326638

-

C>T

22104

429919

27.97

1.231e-07

0.9519

chr6:108659486

rs4326264

AFG1L

C>T

879

13870

27.82

1.334e-07

1.203

chr3:188694749

rs710493

TPRG1

A>G

2380

40458

27.14

1.892e-07

1.119

chr23:67891077

rs7886230

STARD8

T>C

2226

37207

26.08

3.278e-07

1.122

chr23:36258594

rs7879188

CFAP47

G>A

2877

48730

25.89

3.608e-07

1.107

chr23:67645007

rs5919559

OPHN1

A>G

4705

81590

25.82

3.75e-07

1.085

chr23:53347028

rs1547218

IQSEC2

T>C

2215

37038

25.67

4.041e-07

1.121

chr23:111065460

rs3027743

TRPC5

T>C

1957

32512

25.12

5.376e-07

1.127

chr13:19671629

rs35021688

-

C>T

3220

55900

24.47

7.555e-07

1.097

chr18:54938896

rs7232310

-

T>C

13298

242154

24.38

7.903e-07

1.053

chr3:178982869

rs1468923

KCNMB3

G>A

15895

291137

24.27

8.352e-07

1.05

chr4:60707711

rs12499997

-

C>T

13101

257443

24.12

9.05e-07

0.9499

chr6:108602696

rs9486843

-

C>T

834

13283

24.06

9.33e-07

1.193

chr7:8151296

rs73674818

-

T>C

1884

31804

24.06

9.36e-07

1.126

chr18:9536315

rs14336

RALBP1

A>C

766

12101

23.86

1.037e-06

1.201

chr23:110494841

rs12013711

CAPN6

C>G

1789

29700

23.35

1.349e-06

1.128

chr3:132058350

rs11706011

ACP3

T>A

7623

137717

26.0

3.412e-07

1.068

chr18:54920558

rs4800968

-

T>C

11157

204378

23.66

1.148e-06

1.056

chr18:54938896

rs7232310

-

T>C

12060

221152

23.46

1.275e-06

1.054

chr1:161388960

rs4326638

-

C>T

20992

410850

22.77

1.828e-06

0.9551

chr18:54943951

rs2193280

-

A>G

11481

210593

22.18

2.477e-06

1.054

chr13:94799771

rs1544088

GPC6

A>G

11307

224071

21.12

4.317e-06

0.9502

chr4:60707711

rs12499997

-

C>T

12584

248844

20.84

4.993e-06

0.9522

chr18:64709287

rs76833586

-

T>G

636

14562

20.53

5.863e-06

0.8314

chr11:2294715

rs11022045

-

C>T

3435

60735

20.26

6.744e-06

1.086

chr6:5379185

rs41504146

FARS2

T>G

2561

44775

19.85

8.376e-06

1.098

chr3:173076822

rs34569148

-

G>A

8920

163030

19.56

9.772e-06

1.055

chr22:40820151

rs5757949

MRTFA

T>C

14148

261573

19.35

1.089e-05

1.047

chr18:51193612

rs9947427

-

T>C

16597

307783

19.32

1.104e-05

1.045

chr16:23887804

rs73537082

PRKCB

A>G

1515

32377

19.3

1.118e-05

0.8892

chr12:107940359

rs117553123

BTBD11

C>T

842

18717

19.21

1.171e-05

0.8558

chr18:55027333

rs112792874

ST8SIA3

CG>C

7040

141130

19.17

1.193e-05

0.9435

chr9:3421300

rs13295925

RFX3

G>A

4543

92282

18.76

1.481e-05

0.9329

chr7:47406661

rs2462624

TNS3

T>C

8138

162373

18.6

1.613e-05

0.9474

chr3:132099515

rs11924446

-

A>C

8694

158937

18.53

1.669e-05

1.054

chr10:59212316

rs11005802

-

C>T

7894

143930

18.53

1.672e-05

1.056

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds ratio
chr4:60707711	rs12499997	-	C>T	12584	10254	25.28	4.961e-07	0.924
chr10:130226025	rs1541180	-	T>C	15752	12720	24.44	7.671e-07	0.9293
chr4:60619046	rs4860818	-	T>C	17762	13082	23.87	1.032e-06	1.074
chr7:156469123	rs2302148	RNF32	G>A	1494	946	22.92	1.687e-06	1.223
chr2:122649303	rs78837168	-	G>A	1022	970	22.36	2.26e-06	0.8071
chr7:156468559	rs3823617	RNF32	T>C	1522	972	21.47	3.602e-06	1.213
chr20:13066751	rs6134779	SPTLC3	C>T	13485	9865	21.1	4.353e-06	1.075
chr12:22444310	rs113567015	ST8SIA1	A>G	701	689	21.09	4.379e-06	0.7804
chr11:36115060	rs112160003	LDLRAD3	G>A	1539	986	21.07	4.428e-06	1.209
chr2:127521748	rs75202922	-	G>A	952	578	20.74	5.27e-06	1.274
chr10:47623492	rs78583066	-	C>T	5178	3638	20.62	5.607e-06	1.11
chr4:164777197	rs923913	MARCHF1	T>C	21661	17225	19.64	9.332e-06	0.939
chr3:123389855	rs17299206	MYLK	G>A	4079	3459	19.15	1.209e-05	0.8992
chr10:100934048	rs116932837	HPSE2	C>A	795	760	18.54	1.666e-05	0.8024
chr2:47494080	rs12469004	-	A>G	6435	5334	18.31	1.876e-05	0.9178
chr23:117423405	rs62608298	-	C>T	954	577	18.01	2.197e-05	1.254
chr5:179211916	rs76201679	-	A>G	1262	807	17.55	2.795e-05	1.21
chr5:111108996	rs62371570	NREP	T>C	4978	3508	17.47	2.918e-05	1.102
chr2:51355931	rs115459545	NRXN1	A>G	1188	755	17.42	2.996e-05	1.217
chr11:27384585	rs11549824	CCDC34	G>A	2837	2443	17.4	3.026e-05	0.8877

ID	Name	Top Correlation
ICD: J039	Acute tonsillitis, unspecified	2/20
ICD: M549	Dorsalgia, unspecified	4/20

ID	Name	Top Correlation
ICD-10: A045	Campylobacter enteritis	0/20
ICD-10: A09	Diarrhoea and gastro-enteritis of presumed infectious origin	0/20
ICD-10: A491	Streptococcal infection, unspecified	0/20
ICD-10: C099	Tonsil, unspecified	0/20
ICD-10: G553	Nerve root and plexus compressions in other dorsopathies	0/20
ICD-10: J029	Acute pharyngitis, unspecified	0/20
ICD-10: J040	Acute laryngitis	0/20
ICD-10: J069	Acute upper respiratory infection, unspecified	0/20
ICD-10: J209	Acute bronchitis, unspecified	0/20
ICD-10: J312	Chronic pharyngitis	0/20
ICD-10: J350	Chronic tonsillitis	0/20
ICD-10: J351	Hypertrophy of tonsils	0/20
ICD-10: J36	Peritonsillar abscess	0/20
ICD-10: J392	Other diseases of pharynx	0/20
ICD-10: L032	Cellulitis of face	0/20
ICD-10: M500	Cervical disk disorder with myelopathy	0/20
ICD-10: N760	Acute vaginitis	0/20
ICD-10: R070	Pain in throat	0/20

Pharyngitis

0025439

Normal Case/Contol ^ⓘ

Sibling Case/Control ^ⓘ

Links

Statistics

Phenotype Definition

Top SNP Information

Associated Diseases ^ⓘ

Pharyngitis

0025439

Normal Case/Contol ⓘ

Sibling Case/Control ⓘ

Links

Statistics

Phenotype Definition

Top SNP Information Show Normal Table Show Sibling SNP

Associated Diseases ⓘ Shared SNP diseases No shared SNP diseases

Normal Case/Contol ^ⓘ

Sibling Case/Control ^ⓘ

Top SNP Information

Associated Diseases ^ⓘ