Abnormality of the endometrium

0030126

Normal Case/Contol ^ⓘ

Sibling Case/Control ^ⓘ

Links

Sex Split

Interactive Plot

Statistics

Case	Control
36083	424111

Phenotype Definition

An anomaly of the inner mucous membrane of the uterus. [HPO:probinson]

Top SNP Information

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds ratio
chr25:2692710	rs2259750	-	A>G	12466	170405	349.3	5.887e-78	0.8268
chr25:2679949	rs311121	-	G>T	12530	127673	252.8	6.371e-57	1.176
chr25:2661556	rs73188900	-	A>C	937	17344	195.8	1.711e-44	0.6261
chr25:154974730	rs144759332	-	C>G	2770	24616	194.4	3.496e-44	1.328
chr25:154999134	rs6642320	-	G>A	28869	316146	190.0	3.108e-43	1.115
chr25:2645366	rs311083	-	C>G	26461	331361	185.4	3.145e-42	0.8978
chr25:155104608	rs5940618	-	G>A	14837	191873	181.9	1.884e-41	0.8796
chr25:154935282	rs112437556	-	C>T	2899	26340	175.4	4.856e-40	1.302
chr25:155013081	rs146997510	-	T>A	1537	24949	161.8	4.681e-37	0.7145
chr25:154986418	rs142918084	-	C>G	3201	29748	155.7	1.004e-35	1.267
chr25:2691012	rs142162416	-	A>G	3896	37208	152.5	4.907e-35	1.237
chr25:155058865	rs73234550	-	G>A	1821	28475	150.0	1.723e-34	0.7418
chr25:2676160	rs312232	-	C>T	18814	202860	147.8	5.286e-34	1.112
chr25:2676915	rs311115	-	G>C	6824	69045	142.1	9.08e-33	1.171
chr25:2644302	rs1136470	-	C>T	11520	121373	130.2	3.635e-30	1.128
chr25:155183483	rs73237015	-	G>A	14686	157763	118.8	1.149e-27	1.11
chr25:154998312	rs306885	-	T>G	37644	422151	116.1	4.462e-27	1.085
chr25:2653913	rs111628445	-	G>A	30492	374193	112.7	2.548e-26	0.9217
chr25:2685254	rs311142	-	C>T	28117	345888	110.3	8.268e-26	0.9213
chr25:2681878	rs73190930	-	A>G	10567	111746	110.1	9.505e-26	1.122
chr25:2692710	rs2259750	-	A>G	11626	156976	255.0	2.14e-57	0.8451
chr25:2679949	rs311121	-	G>T	11594	119194	221.0	5.552e-50	1.171
chr25:155104608	rs5940618	-	G>A	13179	173854	210.0	1.37e-47	0.8649
chr25:154999134	rs6642320	-	G>A	27069	296294	205.9	1.062e-46	1.124
chr25:2661556	rs73188900	-	A>C	927	17187	191.0	1.898e-43	0.628
chr25:154935282	rs112437556	-	C>T	2859	25962	181.5	2.325e-41	1.31
chr25:2645366	rs311083	-	C>G	24826	311730	162.0	4.15e-37	0.9012
chr25:155013081	rs146997510	-	T>A	1512	24637	158.0	3.173e-36	0.7153
chr25:154986418	rs142918084	-	C>G	2993	27708	156.9	5.336e-36	1.279
chr25:2691012	rs142162416	-	A>G	3824	36616	154.1	2.247e-35	1.242
chr25:155058865	rs73234550	-	G>A	1806	28205	142.4	8.087e-33	0.7464
chr25:154974730	rs144759332	-	C>G	2207	19992	139.3	3.835e-32	1.307
chr25:2644302	rs1136470	-	C>T	10912	114902	137.6	8.844e-32	1.136
chr25:155183483	rs73237015	-	G>A	14472	155470	133.0	8.852e-31	1.119
chr25:2676915	rs311115	-	G>C	6097	61814	132.1	1.418e-30	1.175
chr25:2685254	rs311142	-	C>T	26692	331701	127.2	1.706e-29	0.9134
chr25:154998312	rs306885	-	T>G	35639	400800	124.0	8.455e-29	1.091
chr25:2676160	rs312232	-	C>T	16817	182781	121.8	2.524e-28	1.107
chr25:2682149	rs311128	-	C>T	4141	40920	119.4	8.448e-28	1.201
chr25:2681878	rs73190930	-	A>G	10075	106500	117.3	2.479e-27	1.129

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds ratio
chr10:63805617	rs4948496	ARID5B	T>C	31957	17674	30.54	3.272e-08	0.9322
chr5:111339088	rs25794	-	G>A	2974	1344	25.73	3.926e-07	1.185
chr6:96284385	rs72918407	-	A>G	2521	1572	25.46	4.513e-07	0.8477
chr18:3609693	rs78593332	DLGAP1	T>C	2050	1286	22.25	2.392e-06	0.8434
chr5:157703098	rs79641432	-	T>A	1040	426	21.0	4.599e-06	1.303
chr10:63785089	rs10821944	ARID5B	T>G	19122	10650	20.08	7.444e-06	0.9384
chr10:63786554	rs11593907	ARID5B	T>C	14772	8304	19.58	9.649e-06	0.9339
chr8:108225020	Affx-31291797	-	AG>A	6889	3985	19.52	9.934e-06	0.9114
chr12:114666099	rs2555009	-	G>A	33433	18310	18.91	1.367e-05	0.9464
chr14:39092511	rs79287863	-	C>T	2311	1420	18.82	1.438e-05	0.8618
chr7:22870074	rs10224244	-	C>A	21292	11808	18.76	1.486e-05	0.9422
chr7:5289266	rs11770660	-	C>T	10356	5880	18.72	1.513e-05	0.9262
chr9:116866926	rs6478063	-	T>G	29257	15056	18.72	1.516e-05	1.058
chr3:36672279	rs7643528	-	T>C	27195	14970	18.65	1.567e-05	0.9455
chr15:40703609	rs4924466	IVD	G>A	4045	2398	18.54	1.668e-05	0.8919
chr7:67401021	rs10263643	-	T>G	33272	18217	18.48	1.715e-05	0.947
chr5:67269882	rs13182986	-	A>G	6206	3013	18.44	1.754e-05	1.105
chr12:114677491	rs2555014	-	G>T	31088	16023	18.43	1.766e-05	1.057
chr1:58207801	rs11576949	DAB1	C>T	4666	2741	18.2	1.984e-05	0.8991
chr3:79601267	rs9863250	ROBO1	G>T	13509	7631	18.1	2.092e-05	0.9341

Associated Diseases ^ⓘ

ID	Name	Top Correlation
ICD: C541	Endometrium	1/20
ICD: C55	Malignant neoplasm of uterus, part unspecified	1/20
ICD: N800	Endometriosis of uterus	1/20
ICD: N832	Other and unspecified ovarian cysts	9/20
ICD: N840	Polyp of corpus uteri	16/20
ICD: N841	Polyp of cervix uteri	9/20
ICD: N950	Postmenopausal bleeding	17/20

ID	Name	Top Correlation
ICD-10: C482	Peritoneum, unspecified	0/20
ICD-10: D069	Cervix, unspecified	0/20
ICD-10: D260	Cervix uteri	0/20
ICD-10: D261	Corpus uteri	0/20
ICD-10: N709	Salpingitis and oophoritis, unspecified	0/20
ICD-10: N72	Inflammatory disease of cervix uteri	0/20
ICD-10: N739	Female pelvic inflammatory disease, unspecified	0/20
ICD-10: N751	Abscess of Bartholin's gland	0/20
ICD-10: N760	Acute vaginitis	0/20
ICD-10: N764	Abscess of vulva	0/20
ICD-10: N801	Endometriosis of ovary	0/20
ICD-10: N802	Endometriosis of Fallopian tube	0/20
ICD-10: N803	Endometriosis of pelvic peritoneum	0/20
ICD-10: N808	Other endometriosis	0/20
ICD-10: N809	Endometriosis, unspecified	0/20
ICD-10: N830	Follicular cyst of ovary	0/20
ICD-10: N842	Polyp of vagina	0/20
ICD-10: N850	Endometrial glandular hyperplasia	0/20
ICD-10: N851	Endometrial adenomatous hyperplasia	0/20
ICD-10: N941	Dyspareunia	0/20
ICD-10: N946	Dysmenorrhoea, unspecified	0/20
ICD-10: O269	Pregnancy-related condition, unspecified	0/20
ICD-10: O341	Maternal care for tumour of corpus uteri	0/20
ICD-10: O722	Delayed and secondary postpartum haemorrhage	0/20
ICD-10: O730	Retained placenta, without haemorrhage	0/20
ICD-10: O908	Other complications of the puerperium, not elsewhere classified	0/20
ICD-10: R195	Other fecal abnormalities	0/20

Abnormality of the endometrium

0030126

Normal Case/Contol ⓘ

Sibling Case/Control ⓘ

Links

Statistics

Phenotype Definition

Top SNP Information Show Normal Table Show Sibling SNP

Associated Diseases ⓘ Shared SNP diseases No shared SNP diseases

Normal Case/Contol ^ⓘ

Sibling Case/Control ^ⓘ

Top SNP Information

Associated Diseases ^ⓘ