Case | Control |
---|---|
19172 | 441022 |
An anomaly of venous function. [HPO:probinson]
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr1:10833232 | rs58064215 | CASZ1 | G>C | 13272 | 283958 | 121.4 | 3.184e-28 | 1.127 |
chr15:48426484 | rs1426654 | SLC24A5 | A>G | 789 | 26737 | 114.2 | 1.191e-26 | 0.6788 |
chr15:48392165 | rs1834640 | - | A>G | 959 | 30665 | 99.49 | 1.967e-23 | 0.7192 |
chr8:145639681 | rs1871534 | SLC39A4 | G>C | 495 | 17650 | 91.67 | 1.023e-21 | 0.6468 |
chr16:88808743 | Affx-13429237 | PIEZO1 | G>A | 5702 | 117874 | 84.87 | 3.182e-20 | 1.144 |
chr16:88744470 | rs8048897 | SNAI3 | G>T | 4019 | 81094 | 82.76 | 9.25e-20 | 1.167 |
chr16:88792047 | Affx-13428879 | PIEZO1 | G>A | 5350 | 110313 | 82.32 | 1.156e-19 | 1.146 |
chr16:88783521 | Affx-13428745 | PIEZO1 | C>T | 4770 | 97594 | 81.53 | 1.727e-19 | 1.153 |
chr8:10557760 | rs57041981 | RP1L1 | A>G | 458 | 16190 | 81.3 | 1.943e-19 | 0.6528 |
chr16:88776297 | rs4390574 | CTU2 | C>T | 4976 | 102500 | 76.8 | 1.889e-18 | 1.145 |
chr9:140957557 | rs11137360 | CACNA1B | A>G | 620 | 20386 | 75.3 | 4.039e-18 | 0.7014 |
chr19:42393286 | rs717225 | ARHGEF1 | A>G | 654 | 21289 | 74.72 | 5.433e-18 | 0.7087 |
chr16:88787704 | rs8043924 | PIEZO1 | C>G | 5542 | 115243 | 73.28 | 1.123e-17 | 1.135 |
chr1:159174683 | rs2814778 | ACKR1 | T>C | 566 | 18811 | 72.92 | 1.347e-17 | 0.6943 |
chr17:58508582 | rs8071181 | C17orf64 | G>A | 429 | 14988 | 71.88 | 2.289e-17 | 0.6607 |
chr16:88783449 | rs8057031 | PIEZO1 | G>C | 18475 | 408966 | 71.64 | 2.581e-17 | 1.09 |
chr9:137925543 | rs7027926 | - | G>A | 479 | 16341 | 71.07 | 3.454e-17 | 0.6766 |
chr16:88807896 | rs7404939 | PIEZO1 | G>A | 5548 | 115629 | 70.14 | 5.524e-17 | 1.132 |
chr1:10831218 | rs172228 | CASZ1 | G>C | 7170 | 151854 | 68.92 | 1.028e-16 | 1.117 |
chr12:3417813 | rs729914 | - | G>T | 459 | 15628 | 67.28 | 2.356e-16 | 0.6782 |
chr1:10833232 | rs58064215 | CASZ1 | G>C | 12194 | 252429 | 180.5 | 3.701e-41 | 1.163 |
chr1:10831218 | rs172228 | CASZ1 | G>C | 6531 | 131493 | 129.9 | 4.224e-30 | 1.172 |
chr1:10824329 | rs6540950 | CASZ1 | C>T | 7456 | 155241 | 86.97 | 1.1e-20 | 1.131 |
chr16:88776297 | rs4390574 | CTU2 | C>T | 4681 | 94655 | 83.56 | 6.175e-20 | 1.157 |
chr16:88807896 | rs7404939 | PIEZO1 | G>A | 5148 | 104824 | 82.55 | 1.031e-19 | 1.149 |
chr16:88783521 | Affx-13428745 | PIEZO1 | C>T | 4533 | 91590 | 81.45 | 1.799e-19 | 1.157 |
chr16:88808743 | Affx-13429237 | PIEZO1 | G>A | 5479 | 112395 | 79.34 | 5.227e-19 | 1.142 |
chr16:88792047 | Affx-13428879 | PIEZO1 | G>A | 5069 | 103579 | 77.5 | 1.324e-18 | 1.145 |
chr16:88787704 | rs8043924 | PIEZO1 | C>G | 5199 | 106475 | 76.22 | 2.536e-18 | 1.143 |
chr16:88744470 | rs8048897 | SNAI3 | G>T | 3859 | 77585 | 73.2 | 1.169e-17 | 1.16 |
chr16:88804734 | rs7184427 | PIEZO1 | G>A | 6169 | 128626 | 65.38 | 6.178e-16 | 1.123 |
chr16:88853729 | Affx-13430005 | - | T>C | 17758 | 390089 | 64.52 | 9.548e-16 | 1.088 |
chr16:88783449 | rs8057031 | PIEZO1 | G>C | 17727 | 389707 | 62.79 | 2.304e-15 | 1.087 |
chr2:68435280 | rs7572554 | AC017083.3 | T>C | 12419 | 302978 | 62.05 | 3.341e-15 | 0.9159 |
chr2:68409037 | rs1868402 | AC017083.3 | A>G | 10325 | 254054 | 61.58 | 4.245e-15 | 0.9119 |
chr2:68457573 | rs12468533 | AC017083.3 | T>C | 12441 | 303202 | 61.16 | 5.272e-15 | 0.9166 |
chr2:68385097 | rs2044693 | AC017083.3 | G>A | 12917 | 314132 | 59.9 | 9.99e-15 | 0.9182 |
chr16:88844433 | rs2968482 | PIEZO1 | T>C | 10716 | 262769 | 59.9 | 9.955e-15 | 0.914 |
chr16:88719980 | rs8046018 | MVD | G>T | 5537 | 115918 | 54.16 | 1.846e-13 | 1.116 |
chr5:127548955 | rs36694 | - | A>C | 10487 | 226521 | 52.96 | 3.399e-13 | 1.089 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr15:48426484 | rs1426654 | SLC24A5 | A>G | 789 | 4108 | 110.2 | 9.063e-26 | 0.6639 |
chr5:33951693 | rs16891982 | SLC45A2 | G>C | 2435 | 10641 | 108.1 | 2.557e-25 | 0.786 |
chr15:48392165 | rs1834640 | - | A>G | 959 | 4793 | 107.6 | 3.318e-25 | 0.6909 |
chr8:145639681 | rs1871534 | SLC39A4 | G>C | 495 | 2825 | 105.8 | 8.171e-25 | 0.6068 |
chr19:42393286 | rs717225 | ARHGEF1 | A>G | 654 | 3480 | 101.5 | 7.246e-24 | 0.6505 |
chr8:10557760 | rs57041981 | RP1L1 | A>G | 458 | 2574 | 91.46 | 1.141e-21 | 0.6167 |
chr1:10833232 | rs58064215 | CASZ1 | G>C | 13272 | 42809 | 91.05 | 1.398e-21 | 1.122 |
chr19:42392441 | rs16975619 | ARHGEF1 | T>C | 600 | 3160 | 88.18 | 5.968e-21 | 0.6579 |
chr23:102201216 | rs725570 | - | A>G | 631 | 3039 | 86.44 | 1.44e-20 | 0.6647 |
chr1:159174683 | rs2814778 | ACKR1 | T>C | 566 | 3000 | 86.0 | 1.798e-20 | 0.6537 |
chr9:140957557 | rs11137360 | CACNA1B | A>G | 620 | 3215 | 84.42 | 4.001e-20 | 0.6678 |
chr19:42391425 | rs28521795 | ARHGEF1 | G>A | 566 | 2987 | 84.0 | 4.936e-20 | 0.6568 |
chr5:33958959 | rs28777 | SLC45A2 | A>C | 2087 | 9037 | 83.99 | 4.963e-20 | 0.7958 |
chr9:137925543 | rs7027926 | - | G>A | 479 | 2615 | 83.79 | 5.494e-20 | 0.635 |
chr19:42392310 | rs2288509 | ARHGEF1 | C>T | 523 | 2795 | 82.05 | 1.328e-19 | 0.6496 |
chr23:64367019 | rs7064929 | - | G>A | 575 | 2786 | 81.16 | 2.082e-19 | 0.6611 |
chr17:58508582 | rs8071181 | C17orf64 | G>A | 429 | 2381 | 80.95 | 2.31e-19 | 0.6247 |
chr23:71628912 | rs3012642 | AL133500.1 | A>G | 743 | 3407 | 77.84 | 1.118e-18 | 0.6978 |
chr10:127291027 | rs927957 | TEX36 | C>T | 764 | 3754 | 76.89 | 1.812e-18 | 0.7048 |
chr23:106146349 | rs5962774 | MORC4 | T>C | 316 | 1724 | 76.0 | 2.839e-18 | 0.5884 |
chr1:10833232 | rs58064215 | CASZ1 | G>C | 12194 | 37518 | 150.7 | 1.193e-34 | 1.167 |
chr1:10831218 | rs172228 | CASZ1 | G>C | 6531 | 19512 | 109.1 | 1.56e-25 | 1.177 |
chr1:10824329 | rs6540950 | CASZ1 | C>T | 7456 | 22967 | 79.63 | 4.514e-19 | 1.141 |
chr16:88776297 | rs4390574 | CTU2 | C>T | 4681 | 14083 | 67.56 | 2.04e-16 | 1.159 |
chr16:88807896 | rs7404939 | PIEZO1 | G>A | 5148 | 15630 | 64.52 | 9.571e-16 | 1.148 |
chr16:88783521 | Affx-13428745 | PIEZO1 | C>T | 4533 | 13655 | 64.19 | 1.13e-15 | 1.157 |
chr16:88744470 | rs8048897 | SNAI3 | G>T | 3859 | 11504 | 61.97 | 3.486e-15 | 1.167 |
chr16:88792047 | Affx-13428879 | PIEZO1 | G>A | 5069 | 15440 | 61.1 | 5.428e-15 | 1.145 |
chr16:88787704 | rs8043924 | PIEZO1 | C>G | 5199 | 15862 | 60.61 | 6.962e-15 | 1.143 |
chr16:88808743 | Affx-13429237 | PIEZO1 | G>A | 5479 | 16791 | 60.24 | 8.386e-15 | 1.139 |
chr2:68435280 | rs7572554 | AC017083.3 | T>C | 12419 | 45234 | 54.89 | 1.275e-13 | 0.9124 |
chr16:88853729 | Affx-13430005 | - | T>C | 17758 | 58071 | 54.73 | 1.383e-13 | 1.09 |
chr2:68457573 | rs12468533 | AC017083.3 | T>C | 12441 | 45260 | 53.18 | 3.047e-13 | 0.9138 |
chr2:68409037 | rs1868402 | AC017083.3 | A>G | 10325 | 37853 | 50.1 | 1.461e-12 | 0.9119 |
chr2:68385097 | rs2044693 | AC017083.3 | G>A | 12917 | 46834 | 49.79 | 1.712e-12 | 0.9172 |
chr16:88804734 | rs7184427 | PIEZO1 | G>A | 6169 | 19121 | 49.59 | 1.895e-12 | 1.12 |
chr16:88844433 | rs2968482 | PIEZO1 | T>C | 10716 | 39135 | 48.21 | 3.835e-12 | 0.9144 |
chr16:88719980 | rs8046018 | MVD | G>T | 5537 | 17182 | 47.95 | 4.364e-12 | 1.122 |
chr3:128290848 | rs2713587 | - | A>G | 19011 | 62590 | 46.8 | 7.86e-12 | 1.083 |
chr5:127548955 | rs36694 | - | A>C | 10487 | 33697 | 44.82 | 2.165e-11 | 1.092 |
ID | Name | Top Correlation |
---|---|---|
ICD: I839 | Varicose veins of lower extremities without ulcer or inflammation | 15/20 |