Statistics
| Case | Control |
|---|---|
| 5062 | 455132 |
Phenotype Definition
A cough that produces phlegm or mucus. []
Top SNP Information
| Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
|---|---|---|---|---|---|---|---|---|
| chr9:107647220 | rs4149268 | ABCA1 | C>T | 4369 | 364806 | 25.51 | 4.412e-07 | 1.104 |
| chr6:164583566 | rs807916 | - | T>C | 2030 | 199323 | 25.43 | 4.596e-07 | 0.8828 |
| chr4:39355501 | rs13142220 | RFC1 | G>A | 1152 | 88729 | 25.32 | 4.867e-07 | 1.171 |
| chr14:90813429 | rs2149652 | - | C>T | 5227 | 441348 | 23.37 | 1.338e-06 | 1.1 |
| chr2:215909955 | rs6753150 | ABCA12 | G>A | 295 | 19905 | 22.5 | 2.099e-06 | 1.325 |
| chr2:215910724 | rs11890512 | ABCA12 | T>G | 293 | 19813 | 22.08 | 2.62e-06 | 1.322 |
| chr4:179850046 | rs73002270 | - | A>G | 469 | 51365 | 21.65 | 3.277e-06 | 0.802 |
| chr11:16933523 | rs177556 | PLEKHA7 | C>T | 1258 | 98635 | 21.29 | 3.942e-06 | 1.149 |
| chr18:62606602 | rs1942697 | - | A>G | 1379 | 109020 | 20.68 | 5.423e-06 | 1.141 |
| chr5:16711087 | rs26740 | MYO10 | C>T | 226 | 14882 | 20.43 | 6.169e-06 | 1.357 |
| chr3:65885663 | rs7430400 | MAGI1 | T>C | 304 | 20888 | 20.12 | 7.262e-06 | 1.3 |
| chr7:139601349 | rs75453321 | TBXAS1 | G>T | 301 | 20673 | 20.05 | 7.547e-06 | 1.301 |
| chr2:122509246 | rs59934189 | TSN | C>T | 194 | 12549 | 19.56 | 9.76e-06 | 1.379 |
| chr14:90821670 | rs4904678 | - | C>T | 5595 | 475812 | 19.51 | 9.997e-06 | 1.089 |
| chr10:21833156 | rs16921849 | MLLT10 | A>G | 1725 | 168439 | 19.26 | 1.139e-05 | 0.8902 |
| chr3:46036264 | rs55844314 | FYCO1 | T>G | 421 | 30241 | 19.17 | 1.197e-05 | 1.244 |
| chr10:65924376 | rs4390238 | - | G>T | 182 | 11693 | 19.11 | 1.235e-05 | 1.388 |
| chr10:22043407 | rs17409138 | - | A>G | 1950 | 189373 | 19.07 | 1.261e-05 | 0.8961 |
| chr12:47375091 | rs114462844 | - | C>A | 228 | 15152 | 19.05 | 1.275e-05 | 1.341 |
| chr1:247938748 | rs6587481 | - | C>T | 201 | 13150 | 18.89 | 1.383e-05 | 1.364 |
| chr4:39355501 | rs13142220 | RFC1 | G>A | 1112 | 86625 | 25.06 | 5.553e-07 | 1.173 |
| chr6:164583566 | rs807916 | - | T>C | 1933 | 191437 | 22.25 | 2.397e-06 | 0.887 |
| chr9:107647220 | rs4149268 | ABCA1 | C>T | 3954 | 334666 | 22.23 | 2.418e-06 | 1.101 |
| chr7:139601349 | rs75453321 | TBXAS1 | G>T | 293 | 20179 | 20.88 | 4.894e-06 | 1.313 |
| chr20:4257605 | rs56168212 | - | T>C | 562 | 41997 | 20.73 | 5.301e-06 | 1.22 |
| chr10:21833156 | rs16921849 | MLLT10 | A>G | 1603 | 159052 | 19.22 | 1.165e-05 | 0.8865 |
| chr17:76219591 | rs2071214 | BIRC5 | A>G | 492 | 53475 | 18.85 | 1.417e-05 | 0.8177 |
| chr10:22043407 | rs17409138 | - | A>G | 1850 | 182181 | 18.56 | 1.645e-05 | 0.8946 |
| chr5:41336050 | rs6872806 | PLCXD3 | G>A | 1703 | 168209 | 18.44 | 1.756e-05 | 0.8917 |
| chr18:62606602 | rs1942697 | - | A>G | 1229 | 98426 | 18.35 | 1.837e-05 | 1.14 |
| chr3:131797128 | rs75004845 | CPNE4 | A>T | 128 | 16688 | 18.1 | 2.101e-05 | 0.6855 |
| chr1:219664478 | rs114642111 | - | G>T | 71 | 10507 | 18.09 | 2.11e-05 | 0.6048 |
| chr6:31631531 | rs114733011 | GPANK1 | G>A | 334 | 23842 | 18.06 | 2.144e-05 | 1.268 |
| chr17:52933295 | rs74819928 | - | T>G | 416 | 45852 | 18.05 | 2.152e-05 | 0.8079 |
| chr7:18993870 | rs2389998 | HDAC9 | T>C | 2300 | 223718 | 18.01 | 2.193e-05 | 0.9036 |
| chr20:59341002 | rs17730181 | - | G>T | 290 | 20354 | 17.98 | 2.237e-05 | 1.289 |
| chr14:90813429 | rs2149652 | - | C>T | 4838 | 415442 | 17.95 | 2.267e-05 | 1.091 |
| chr8:123644699 | rs74980527 | - | G>A | 310 | 21973 | 17.91 | 2.313e-05 | 1.278 |
| chr3:196190893 | rs13094241 | - | G>T | 2918 | 245253 | 17.8 | 2.45e-05 | 1.098 |
| chr12:47375091 | rs114462844 | - | C>A | 209 | 14059 | 17.6 | 2.729e-05 | 1.342 |
| Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
|---|---|---|---|---|---|---|---|---|
| chr16:79526169 | rs4341757 | - | C>T | 2476 | 4354 | 21.74 | 3.12e-06 | 0.8729 |
| chr3:97472333 | rs76356047 | - | T>C | 206 | 211 | 20.86 | 4.946e-06 | 1.565 |
| chr18:62606602 | rs1942697 | - | A>G | 1229 | 1664 | 20.51 | 5.944e-06 | 1.198 |
| chr2:169546710 | rs4668098 | CERS6 | G>A | 1996 | 2822 | 19.84 | 8.417e-06 | 1.156 |
| chr8:139302480 | rs17721181 | FAM135B | T>C | 4849 | 7255 | 19.66 | 9.232e-06 | 1.12 |
| chr16:79521323 | rs11150169 | - | T>C | 2031 | 3601 | 19.51 | 9.999e-06 | 0.8712 |
| chr10:71932068 | rs117458908 | - | C>T | 180 | 421 | 19.5 | 1.006e-05 | 0.6738 |
| chr6:164583566 | rs807916 | - | T>C | 1933 | 3439 | 19.43 | 1.043e-05 | 0.8693 |
| chr17:982040 | rs2589476 | ABR | A>G | 380 | 788 | 19.23 | 1.161e-05 | 0.7566 |
| chr3:180506546 | rs11925675 | - | A>G | 823 | 1076 | 19.19 | 1.183e-05 | 1.234 |
| chr1:113775037 | rs17497675 | - | G>C | 324 | 374 | 18.47 | 1.722e-05 | 1.39 |
| chr17:14655320 | rs8071144 | - | T>C | 1748 | 3121 | 18.44 | 1.753e-05 | 0.8679 |
| chr3:180437282 | rs78458734 | - | G>A | 850 | 1121 | 18.33 | 1.855e-05 | 1.224 |
| chr13:34373894 | rs73172003 | - | G>A | 141 | 135 | 18.32 | 1.868e-05 | 1.67 |
| chr7:125343616 | rs116846160 | - | C>T | 280 | 315 | 18.11 | 2.082e-05 | 1.422 |
| chr4:162635553 | rs7693232 | FSTL5 | C>G | 443 | 541 | 17.87 | 2.371e-05 | 1.317 |
| chr14:90813429 | rs2149652 | - | C>T | 4838 | 7300 | 17.57 | 2.767e-05 | 1.115 |
| chr2:140468272 | rs79886278 | - | C>A | 168 | 390 | 17.44 | 2.968e-05 | 0.6792 |
| chr19:35137625 | rs78228921 | SCGB2B2 | G>A | 423 | 857 | 17.38 | 3.062e-05 | 0.7763 |
| chr13:34462642 | rs112424176 | RFC3 | C>G | 145 | 142 | 17.37 | 3.083e-05 | 1.632 |
Associated Diseases ⓘ
| ID | Name | Top Correlation |
|---|---|---|
| ICD: R05 | Cough | 7/20 |