Case | Control |
---|---|
97471 | 362723 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr6:396321 | rs12203592 | IRF4 | C>T | 44369 | 156836 | 113.7 | 1.535e-26 | 1.067 |
chr6:421281 | rs62389423 | - | G>A | 36065 | 127971 | 75.53 | 3.606e-18 | 1.059 |
chr2:26113913 | rs78404020 | - | A>G | 2541 | 11276 | 65.39 | 6.139e-16 | 0.8365 |
chr2:150445102 | rs4618014 | - | A>G | 3006 | 12833 | 46.94 | 7.311e-12 | 0.8696 |
chr22:42448761 | rs5758563 | WBP2NL | G>T | 2713 | 11663 | 46.8 | 7.847e-12 | 0.8636 |
chr20:19214390 | rs6136658 | SLC24A3 | G>A | 2574 | 11101 | 46.32 | 1.007e-11 | 0.861 |
chr6:93667780 | rs9363020 | - | G>A | 2238 | 9753 | 46.12 | 1.115e-11 | 0.8522 |
chr1:54009583 | rs41363049 | GLIS1 | C>T | 2451 | 10548 | 42.82 | 6.001e-11 | 0.8629 |
chr1:169510139 | rs13306334 | F5 | G>A | 2177 | 9431 | 41.52 | 1.168e-10 | 0.8574 |
chr23:64367019 | rs7064929 | - | G>A | 4059 | 13507 | 41.04 | 1.49e-10 | 1.123 |
chr4:156685655 | rs3796562 | GUCY1B1 | T>C | 2593 | 11063 | 39.93 | 2.633e-10 | 0.8705 |
chr3:181586376 | rs10937067 | - | G>A | 2571 | 10955 | 38.96 | 4.319e-10 | 0.8715 |
chr25:2609031 | rs149548031 | - | C>T | 1948 | 8465 | 38.69 | 4.965e-10 | 0.8548 |
chr6:475489 | rs12210050 | - | C>T | 40888 | 147451 | 38.31 | 6.039e-10 | 1.039 |
chr4:129618472 | rs6842121 | - | G>T | 2314 | 9914 | 37.92 | 7.375e-10 | 0.8669 |
chr1:9660299 | rs60097082 | TMEM201 | A>G | 3067 | 12894 | 37.76 | 8.009e-10 | 0.8831 |
chr13:109016132 | rs9559309 | - | C>T | 2221 | 9534 | 37.33 | 9.965e-10 | 0.8653 |
chr5:158327749 | rs1001066 | EBF1 | A>G | 2466 | 10505 | 37.13 | 1.104e-09 | 0.8719 |
chr1:169087494 | rs3766033 | ATP1B1 | G>C | 3629 | 15096 | 37.11 | 1.115e-09 | 0.8926 |
chr19:38250656 | rs856299 | ZNF573 | C>T | 3986 | 16481 | 36.47 | 1.55e-09 | 0.898 |
chr6:396321 | rs12203592 | IRF4 | C>T | 43854 | 155061 | 113.9 | 1.371e-26 | 1.068 |
chr6:421281 | rs62389423 | - | G>A | 35609 | 126256 | 78.63 | 7.507e-19 | 1.061 |
chr6:31275211 | rs28367687 | HLA-B | G>C | 8697 | 34812 | 39.35 | 3.544e-10 | 0.9259 |
chr6:31238495 | rs17884390 | HLA-C | G>A | 8543 | 34223 | 39.08 | 4.058e-10 | 0.9256 |
chr6:31243495 | rs6913377 | HLA-B | G>A | 8566 | 34298 | 38.62 | 5.137e-10 | 0.9261 |
chr6:31236289 | rs114472942 | - | C>A | 8465 | 33916 | 38.61 | 5.17e-10 | 0.9257 |
chr6:31253716 | rs28367592 | HLA-B | C>G | 8610 | 34464 | 38.58 | 5.249e-10 | 0.9263 |
chr6:31259446 | rs28367596 | HLA-B | A>T | 8569 | 34299 | 38.19 | 6.402e-10 | 0.9265 |
chr6:31229896 | rs17198455 | - | G>T | 8405 | 33664 | 38.17 | 6.49e-10 | 0.9259 |
chr6:31234438 | rs28397309 | - | A>C | 8456 | 33860 | 38.14 | 6.586e-10 | 0.9261 |
chr6:31258141 | rs28367594 | HLA-B | G>A | 8612 | 34463 | 38.05 | 6.887e-10 | 0.9268 |
chr6:475489 | rs12210050 | - | C>T | 40363 | 145633 | 37.47 | 9.282e-10 | 1.039 |
chr6:31237257 | rs17879162 | HLA-C | C>T | 8476 | 33916 | 37.43 | 9.489e-10 | 0.9268 |
chr6:31251057 | rs28367590 | HLA-B | G>T | 8608 | 34411 | 37.13 | 1.106e-09 | 0.9276 |
chr6:31233651 | rs28397307 | - | G>A | 8454 | 33809 | 36.8 | 1.308e-09 | 0.9273 |
chr6:31230924 | rs7747738 | - | C>T | 8494 | 33952 | 36.6 | 1.454e-09 | 0.9277 |
chr6:31261691 | rs28367598 | HLA-B | T>C | 8632 | 34475 | 36.27 | 1.717e-09 | 0.9285 |
chr6:31236102 | rs28367569 | - | T>C | 8490 | 33923 | 36.1 | 1.879e-09 | 0.9282 |
chr6:31236845 | rs3176007 | HLA-C | A>G | 8465 | 33812 | 35.6 | 2.42e-09 | 0.9285 |
chr6:31237764 | Affx-52368559 | HLA-C | T>TAA | 8175 | 32647 | 34.08 | 5.295e-09 | 0.9289 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr6:32587782 | rs9271414 | - | T>C | 65519 | 98056 | 39.88 | 2.704e-10 | 1.04 |
chr6:31275211 | rs28367687 | HLA-B | G>C | 8697 | 14513 | 39.5 | 3.287e-10 | 0.9165 |
chr6:31259446 | rs28367596 | HLA-B | A>T | 8569 | 14296 | 38.15 | 6.551e-10 | 0.9173 |
chr6:31243495 | rs6913377 | HLA-B | G>A | 8566 | 14281 | 37.64 | 8.508e-10 | 0.9178 |
chr6:31253716 | rs28367592 | HLA-B | C>G | 8610 | 14348 | 37.61 | 8.626e-10 | 0.918 |
chr6:31229896 | rs17198455 | - | G>T | 8405 | 14012 | 36.82 | 1.298e-09 | 0.9179 |
chr6:31251057 | rs28367590 | HLA-B | G>T | 8608 | 14333 | 36.67 | 1.399e-09 | 0.919 |
chr6:31234438 | rs28397309 | - | A>C | 8456 | 14088 | 36.57 | 1.472e-09 | 0.9184 |
chr6:31258141 | rs28367594 | HLA-B | G>A | 8612 | 14339 | 36.56 | 1.477e-09 | 0.9191 |
chr6:31236289 | rs114472942 | - | C>A | 8465 | 14096 | 35.97 | 2.008e-09 | 0.9191 |
chr6:31238495 | rs17884390 | HLA-C | G>A | 8543 | 14209 | 35.53 | 2.51e-09 | 0.9199 |
chr6:31237257 | rs17879162 | HLA-C | C>T | 8476 | 14101 | 35.32 | 2.803e-09 | 0.9198 |
chr6:31230924 | rs7747738 | - | C>T | 8494 | 14125 | 35.13 | 3.082e-09 | 0.9201 |
chr6:31233651 | rs28397307 | - | G>A | 8454 | 14058 | 34.83 | 3.59e-09 | 0.9203 |
chr6:31261691 | rs28367598 | HLA-B | T>C | 8632 | 14341 | 34.82 | 3.608e-09 | 0.921 |
chr6:31236845 | rs3176007 | HLA-C | A>G | 8465 | 14068 | 34.27 | 4.803e-09 | 0.9209 |
chr6:31236102 | rs28367569 | - | T>C | 8490 | 14099 | 33.76 | 6.22e-09 | 0.9216 |
chr6:31182833 | rs114542476 | - | T>G | 7786 | 12966 | 33.1 | 8.772e-09 | 0.9192 |
chr6:396321 | rs12203592 | IRF4 | C>T | 43854 | 65290 | 32.74 | 1.056e-08 | 1.041 |
chr6:32586908 | rs9271367 | - | A>G | 57342 | 85823 | 32.26 | 1.35e-08 | 1.037 |