Case | Control |
---|---|
86574 | 373620 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr15:48426484 | rs1426654 | SLC24A5 | A>G | 4100 | 23426 | 262.6 | 4.653e-59 | 0.7582 |
chr5:33951693 | rs16891982 | SLC45A2 | G>C | 10933 | 56125 | 259.7 | 1.978e-58 | 0.8405 |
chr5:33958959 | rs28777 | SLC45A2 | A>C | 9277 | 47715 | 223.2 | 1.769e-50 | 0.8403 |
chr15:48392165 | rs1834640 | - | A>G | 4927 | 26697 | 202.7 | 5.284e-46 | 0.7997 |
chr2:211717706 | rs12995612 | - | C>G | 2432 | 14040 | 166.3 | 4.767e-38 | 0.7525 |
chr6:170242949 | rs9396958 | - | T>C | 2373 | 13741 | 165.5 | 7.123e-38 | 0.7505 |
chr5:33955673 | rs35391 | SLC45A2 | C>T | 6697 | 34283 | 149.4 | 2.331e-34 | 0.8468 |
chr5:33955326 | rs35390 | SLC45A2 | A>C | 6727 | 34420 | 149.3 | 2.52e-34 | 0.8472 |
chr13:72463541 | rs1460465 | - | A>G | 2407 | 13717 | 149.0 | 2.866e-34 | 0.7627 |
chr13:72441665 | rs3759505 | - | C>T | 2509 | 14206 | 148.2 | 4.311e-34 | 0.7674 |
chr20:2315543 | rs6132532 | AL121899.2 | A>G | 8211 | 41323 | 147.1 | 7.487e-34 | 0.8608 |
chr2:235130071 | rs10177096 | - | A>G | 3283 | 17967 | 146.3 | 1.136e-33 | 0.7936 |
chr19:42392310 | rs2288509 | ARHGEF1 | C>T | 2658 | 14886 | 144.1 | 3.391e-33 | 0.7756 |
chr19:42391425 | rs28521795 | ARHGEF1 | G>A | 2878 | 15944 | 142.1 | 9.459e-33 | 0.7844 |
chr1:236085940 | rs12038310 | - | C>T | 2280 | 12996 | 141.6 | 1.18e-32 | 0.7625 |
chr5:33951116 | rs35397 | SLC45A2 | T>G | 15484 | 74624 | 138.9 | 4.59e-32 | 0.8968 |
chr2:136407479 | rs1446585 | R3HDM1 | A>G | 47663 | 218735 | 137.9 | 7.478e-32 | 0.9331 |
chr19:42393286 | rs717225 | ARHGEF1 | A>G | 3424 | 18519 | 136.6 | 1.471e-31 | 0.8032 |
chr19:42392441 | rs16975619 | ARHGEF1 | T>C | 3093 | 16917 | 136.6 | 1.464e-31 | 0.7944 |
chr2:171380643 | rs34020565 | MYO3B | T>G | 3926 | 20933 | 136.5 | 1.548e-31 | 0.8145 |
chr1:174736877 | rs1653636 | RABGAP1L | C>T | 47872 | 213016 | 50.84 | 1.005e-12 | 0.9584 |
chr3:50070763 | rs7621352 | RBM6 | A>C | 79665 | 350384 | 44.34 | 2.76e-11 | 0.965 |
chr1:103432657 | rs12755987 | COL11A1 | G>A | 50919 | 225784 | 44.12 | 3.09e-11 | 0.9619 |
chr1:103444679 | rs11164649 | COL11A1 | G>T | 51000 | 225968 | 42.57 | 6.813e-11 | 0.9626 |
chr1:174610458 | rs2760058 | RABGAP1L | C>T | 41731 | 185617 | 41.81 | 1.005e-10 | 0.9605 |
chr1:174737543 | rs72715300 | RABGAP1L | A>G | 42431 | 188664 | 41.52 | 1.167e-10 | 0.9609 |
chr3:50108792 | rs3774734 | RBM6 | A>C | 78208 | 331211 | 41.45 | 1.207e-10 | 1.035 |
chr3:49899795 | rs3796386 | CAMKV | G>A | 74801 | 316560 | 40.78 | 1.7e-10 | 1.035 |
chr3:50129399 | Affx-22412948 | RBM6 | C>T | 81330 | 357292 | 40.04 | 2.488e-10 | 0.9667 |
chr1:174516999 | rs41266050 | RABGAP1L | C>T | 41393 | 184049 | 39.99 | 2.554e-10 | 0.9613 |
chr1:174265423 | rs7545388 | RABGAP1L | G>A | 26761 | 120096 | 39.98 | 2.564e-10 | 0.9545 |
chr3:49924940 | rs1062633 | MST1R | C>T | 82028 | 360231 | 39.7 | 2.957e-10 | 0.9668 |
chr3:49949071 | rs868891 | MON1A | A>G | 75446 | 319412 | 39.52 | 3.24e-10 | 1.034 |
chr3:50174848 | rs7642934 | - | G>A | 80906 | 355515 | 39.45 | 3.359e-10 | 0.9669 |
chr1:103483514 | rs945748 | COL11A1 | T>C | 50867 | 225267 | 39.43 | 3.393e-10 | 0.9639 |
chr1:174371209 | rs16846949 | RABGAP1L | A>G | 41150 | 182906 | 39.43 | 3.401e-10 | 0.9615 |
chr3:50187790 | rs2526397 | - | G>T | 61545 | 259721 | 39.37 | 3.501e-10 | 1.036 |
chr3:50153356 | rs1138536 | RBM5 | C>T | 76605 | 324429 | 39.24 | 3.746e-10 | 1.034 |
chr1:174794144 | rs1793316 | RABGAP1L | A>G | 41749 | 185600 | 39.2 | 3.829e-10 | 0.9618 |
chr3:49902544 | rs9821675 | CAMKV | A>G | 88234 | 374616 | 39.11 | 4.005e-10 | 1.034 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr22:46381234 | rs62228062 | - | A>G | 44429 | 30710 | 43.41 | 4.436e-11 | 0.9446 |
chr22:46362396 | rs9330811 | WNT7B | G>A | 74421 | 48105 | 30.7 | 3.008e-08 | 1.044 |
chr16:88783449 | rs8057031 | PIEZO1 | G>C | 77712 | 50298 | 29.13 | 6.784e-08 | 1.042 |
chr22:46420465 | rs12170295 | - | T>C | 64990 | 44116 | 25.73 | 3.937e-07 | 0.961 |
chr2:86016656 | rs13035450 | ATOH8 | G>A | 63415 | 41006 | 24.38 | 7.894e-07 | 1.04 |
chr22:46396925 | rs28628653 | - | A>G | 42987 | 29392 | 23.78 | 1.08e-06 | 0.9582 |
chr22:46414664 | rs28542066 | - | A>G | 65066 | 44123 | 23.37 | 1.339e-06 | 0.9628 |
chr17:46970259 | rs1962412 | ATP5MC1 | C>T | 51602 | 35144 | 22.93 | 1.681e-06 | 0.9611 |
chr6:51504679 | rs2661507 | PKHD1 | C>T | 5173 | 3081 | 22.47 | 2.132e-06 | 1.116 |
chr2:66009782 | rs10206918 | - | C>T | 6655 | 4810 | 22.06 | 2.646e-06 | 0.9133 |
chr17:46978353 | rs962273 | - | C>T | 51532 | 35070 | 21.93 | 2.823e-06 | 0.9619 |
chr22:46428306 | rs9626908 | - | T>C | 58059 | 39407 | 21.55 | 3.449e-06 | 0.9634 |
chr17:47014651 | rs5820737 | SNF8 | CT>C | 44333 | 30241 | 20.93 | 4.757e-06 | 0.9611 |
chr22:46411969 | rs28520003 | - | G>A | 53575 | 36395 | 20.18 | 7.054e-06 | 0.9638 |
chr1:18446736 | rs61765734 | IGSF21 | G>A | 15622 | 10915 | 20.15 | 7.153e-06 | 0.9429 |
chr10:45156416 | rs35348242 | - | C>T | 10641 | 6586 | 20.1 | 7.35e-06 | 1.075 |
chr25:2515463 | rs5939089 | - | G>A | 82827 | 55832 | 19.89 | 8.216e-06 | 0.9665 |
chr3:54186262 | rs11705828 | CACNA2D3 | A>G | 17162 | 11958 | 19.88 | 8.261e-06 | 0.9455 |
chr17:46962853 | rs58376900 | - | C>G | 42496 | 28986 | 19.82 | 8.516e-06 | 0.9616 |
chr2:47104536 | rs114825106 | - | G>C | 1795 | 1392 | 19.75 | 8.81e-06 | 0.8526 |