Case | Control |
---|---|
114 | 460080 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr4:179162634 | rs72702775 | - | G>A | 12 | 10524 | 34.56 | 4.133e-09 | 4.828 |
chr20:62325833 | rs115610405 | RTEL1 | C>A | 16 | 18353 | 29.71 | 5.015e-08 | 3.723 |
chr17:73839326 | rs9904366 | UNC13D | C>T | 12 | 11689 | 29.28 | 6.275e-08 | 4.34 |
chr20:11935078 | rs73091918 | - | C>A | 22 | 30625 | 28.57 | 9.028e-08 | 3.109 |
chr3:152918529 | rs72616700 | - | C>T | 15 | 16988 | 28.5 | 9.355e-08 | 3.763 |
chr18:44392443 | rs117151539 | PIAS2 | T>C | 12 | 11994 | 28.02 | 1.2e-07 | 4.224 |
chr9:110169840 | rs78678445 | - | C>T | 11 | 10741 | 26.93 | 2.112e-07 | 4.339 |
chr12:67978588 | rs2127549 | - | T>C | 45 | 90948 | 26.68 | 2.407e-07 | 2.307 |
chr6:143066785 | rs17071986 | - | A>C | 12 | 12461 | 26.35 | 2.845e-07 | 4.068 |
chr18:21514081 | rs117303947 | LAMA3 | G>A | 11 | 10825 | 26.27 | 2.962e-07 | 4.274 |
chr3:152841926 | rs59679443 | - | G>A | 15 | 18027 | 25.57 | 4.259e-07 | 3.537 |
chr7:31001886 | rs35023183 | GHRHR | C>T | 11 | 11220 | 25.16 | 5.274e-07 | 4.16 |
chr13:40834519 | rs73185578 | - | G>A | 28 | 47762 | 24.22 | 8.604e-07 | 2.597 |
chr2:48127321 | rs77200718 | FBXO11 | T>C | 13 | 14904 | 24.08 | 9.254e-07 | 3.689 |
chr10:93118139 | rs117862704 | - | T>C | 18 | 24761 | 23.87 | 1.031e-06 | 3.113 |
chr18:64076013 | rs75133095 | - | C>T | 32 | 58001 | 23.32 | 1.369e-06 | 2.43 |
chr23:97114762 | rs139132948 | - | C>G | 15 | 19195 | 23.16 | 1.489e-06 | 3.387 |
chr16:85962850 | rs79241186 | - | G>C | 30 | 53579 | 23.08 | 1.555e-06 | 2.477 |
chr13:81818853 | rs74658800 | - | C>T | 15 | 19258 | 22.98 | 1.638e-06 | 3.336 |
chr18:44372572 | rs117744297 | - | T>C | 12 | 13520 | 22.88 | 1.722e-06 | 3.742 |
chr2:163216109 | rs3213843 | GCA | C>T | 4 | 1671 | 31.26 | 2.256e-08 | 9.874 |
chr19:9109488 | rs79434743 | - | C>T | 10 | 8380 | 30.41 | 3.495e-08 | 4.984 |
chr20:62325833 | rs115610405 | RTEL1 | C>A | 16 | 18121 | 29.99 | 4.334e-08 | 3.751 |
chr6:143066785 | rs17071986 | - | A>C | 12 | 11562 | 29.43 | 5.783e-08 | 4.363 |
chr20:11935078 | rs73091918 | - | C>A | 22 | 30105 | 29.15 | 6.69e-08 | 3.15 |
chr22:20767303 | rs73879356 | - | G>A | 9 | 7241 | 29.11 | 6.827e-08 | 5.179 |
chr18:44392443 | rs117151539 | PIAS2 | T>C | 12 | 11852 | 28.22 | 1.081e-07 | 4.25 |
chr2:16484265 | rs7608930 | - | T>C | 19 | 24619 | 27.93 | 1.259e-07 | 3.302 |
chr12:67978588 | rs2127549 | - | T>C | 43 | 84338 | 27.38 | 1.673e-07 | 2.376 |
chr9:110169840 | rs78678445 | - | C>T | 11 | 10598 | 27.2 | 1.834e-07 | 4.373 |
chr17:73839326 | rs9904366 | UNC13D | C>T | 11 | 10549 | 27.16 | 1.872e-07 | 4.368 |
chr18:21514081 | rs117303947 | LAMA3 | G>A | 11 | 10556 | 26.68 | 2.401e-07 | 4.321 |
chr7:150891641 | rs6952465 | IQCA1L | A>G | 26 | 40541 | 26.39 | 2.784e-07 | 2.788 |
chr14:77631296 | rs10133548 | AC007375.2 | T>C | 14 | 16171 | 25.3 | 4.895e-07 | 3.654 |
chr10:93118139 | rs117862704 | - | T>C | 18 | 24272 | 24.48 | 7.509e-07 | 3.161 |
chr18:64076013 | rs75133095 | - | C>T | 32 | 56894 | 24.08 | 9.232e-07 | 2.471 |
chr18:44372572 | rs117744297 | - | T>C | 12 | 13066 | 23.97 | 9.789e-07 | 3.851 |
chr23:97114762 | rs139132948 | - | C>G | 15 | 18794 | 23.74 | 1.103e-06 | 3.442 |
chr16:54499643 | rs111888233 | - | C>T | 14 | 16766 | 23.65 | 1.156e-06 | 3.517 |
chr5:24823457 | rs74541768 | - | T>C | 21 | 30978 | 23.4 | 1.313e-06 | 2.891 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr4:179162634 | rs72702775 | - | G>A | 12 | 82 | 30.94 | 2.659e-08 | 4.904 |
chr23:97114762 | rs139132948 | - | C>G | 15 | 124 | 29.45 | 5.736e-08 | 4.151 |
chr1:158988319 | rs149606671 | IFI16 | C>T | 8 | 43 | 28.19 | 1.098e-07 | 6.158 |
chr14:53744739 | rs79809132 | - | G>A | 14 | 114 | 27.95 | 1.247e-07 | 4.135 |
chr17:73839326 | rs9904366 | UNC13D | C>T | 12 | 90 | 27.03 | 2.005e-07 | 4.46 |
chr9:110169840 | rs78678445 | - | C>T | 11 | 79 | 26.61 | 2.49e-07 | 4.672 |
chr2:65014248 | rs6742754 | - | C>T | 11 | 80 | 25.91 | 3.571e-07 | 4.587 |
chr2:48127321 | rs77200718 | FBXO11 | T>C | 13 | 107 | 25.45 | 4.549e-07 | 4.073 |
chr3:152918529 | rs72616700 | - | C>T | 15 | 136 | 25.19 | 5.209e-07 | 3.717 |
chr6:147374855 | rs73011870 | - | A>G | 16 | 152 | 24.81 | 6.343e-07 | 3.552 |
chr3:152841926 | rs59679443 | - | G>A | 15 | 138 | 24.58 | 7.144e-07 | 3.662 |
chr18:21514081 | rs117303947 | LAMA3 | G>A | 11 | 84 | 24.13 | 8.991e-07 | 4.371 |
chr18:44392443 | rs117151539 | PIAS2 | T>C | 12 | 100 | 23.03 | 1.596e-06 | 4.011 |
chr6:143066785 | rs17071986 | - | A>C | 12 | 100 | 23.02 | 1.605e-06 | 4.009 |
chr18:64076013 | rs75133095 | - | C>T | 32 | 451 | 22.81 | 1.784e-06 | 2.475 |
chr10:107529260 | rs116885931 | - | C>T | 18 | 193 | 22.57 | 2.023e-06 | 3.164 |
chr2:1677766 | rs62116593 | PXDN | G>A | 23 | 282 | 22.53 | 2.067e-06 | 2.816 |
chr7:150891641 | rs6952465 | IQCA1L | A>G | 26 | 336 | 22.52 | 2.077e-06 | 2.67 |
chr22:47852481 | rs4823645 | - | G>T | 19 | 212 | 22.48 | 2.124e-06 | 3.073 |
chr14:96360731 | rs717951 | TUNAR | G>A | 10 | 75 | 22.45 | 2.16e-06 | 4.426 |
chr23:97114762 | rs139132948 | - | C>G | 15 | 121 | 30.1 | 4.112e-08 | 4.225 |
chr14:53744739 | rs79809132 | - | G>A | 14 | 111 | 28.68 | 8.551e-08 | 4.217 |
chr22:20767303 | rs73879356 | - | G>A | 9 | 54 | 27.22 | 1.82e-07 | 5.487 |
chr9:110169840 | rs78678445 | - | C>T | 11 | 78 | 26.74 | 2.331e-07 | 4.699 |
chr7:150891641 | rs6952465 | IQCA1L | A>G | 26 | 308 | 26.62 | 2.481e-07 | 2.906 |
chr2:65014248 | rs6742754 | - | C>T | 11 | 79 | 26.0 | 3.414e-07 | 4.609 |
chr6:143066785 | rs17071986 | - | A>C | 12 | 93 | 25.35 | 4.771e-07 | 4.281 |
chr6:147374855 | rs73011870 | - | A>G | 16 | 149 | 25.24 | 5.065e-07 | 3.598 |
chr18:21514081 | rs117303947 | LAMA3 | G>A | 11 | 80 | 25.21 | 5.155e-07 | 4.515 |
chr17:73839326 | rs9904366 | UNC13D | C>T | 11 | 81 | 25.05 | 5.597e-07 | 4.491 |
chr14:77631296 | rs10133548 | AC007375.2 | T>C | 14 | 122 | 24.67 | 6.807e-07 | 3.829 |
chr2:16484265 | rs7608930 | - | T>C | 19 | 200 | 24.16 | 8.844e-07 | 3.205 |
chr18:44392443 | rs117151539 | PIAS2 | T>C | 12 | 98 | 23.4 | 1.317e-06 | 4.061 |
chr18:64076013 | rs75133095 | - | C>T | 32 | 443 | 23.32 | 1.371e-06 | 2.508 |
chr5:148490113 | rs5872109 | - | GT>G | 18 | 189 | 23.04 | 1.588e-06 | 3.208 |
chr14:96360731 | rs717951 | TUNAR | G>A | 10 | 73 | 23.03 | 1.599e-06 | 4.514 |
chr17:45010863 | rs55657964 | GOSR2 | A>G | 12 | 99 | 23.01 | 1.614e-06 | 4.017 |
chr10:93118139 | rs117862704 | - | T>C | 18 | 192 | 22.34 | 2.283e-06 | 3.154 |
chr2:48127321 | rs77200718 | FBXO11 | T>C | 12 | 101 | 22.29 | 2.348e-06 | 3.937 |
chr19:9109488 | rs79434743 | - | C>T | 10 | 75 | 22.13 | 2.543e-06 | 4.393 |
ID | Name | Top Correlation |
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ID | Name | Top Correlation |
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