Case | Control |
---|---|
12045 | 448149 |
Inflammation of fascia, the tissue under the skin and over the muscle. [HPO:probinson]
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr15:48426484 | rs1426654 | SLC24A5 | A>G | 461 | 27065 | 93.16 | 4.833e-22 | 0.6353 |
chr20:2315543 | rs6132532 | AL121899.2 | A>G | 1015 | 48519 | 59.63 | 1.145e-14 | 0.7793 |
chr15:48392165 | rs1834640 | - | A>G | 606 | 31018 | 58.2 | 2.373e-14 | 0.7295 |
chr6:170242949 | rs9396958 | - | T>C | 268 | 15846 | 55.26 | 1.058e-13 | 0.6336 |
chr5:106908138 | rs163961 | EFNA5 | A>C | 616 | 29952 | 41.3 | 1.305e-10 | 0.7678 |
chr6:163664217 | rs16894688 | PACRG | A>G | 221 | 12664 | 39.29 | 3.649e-10 | 0.6544 |
chr6:3185712 | rs7754077 | - | C>T | 349 | 18323 | 38.86 | 4.561e-10 | 0.7135 |
chr5:147863034 | rs9325101 | HTR4 | A>G | 306 | 16434 | 38.82 | 4.651e-10 | 0.6978 |
chr10:49805216 | rs11101394 | ARHGAP22 | C>T | 342 | 18015 | 38.65 | 5.077e-10 | 0.7117 |
chr5:33951693 | rs16891982 | SLC45A2 | G>C | 1487 | 65571 | 38.64 | 5.103e-10 | 0.8455 |
chr3:122328753 | rs2173764 | PARP15 | A>G | 249 | 13870 | 38.52 | 5.431e-10 | 0.6729 |
chr12:56755058 | rs4301822 | APOF | A>G | 216 | 12396 | 38.47 | 5.568e-10 | 0.6542 |
chr15:45491394 | rs1648299 | SHF | T>C | 318 | 16841 | 37.25 | 1.037e-09 | 0.7075 |
chr2:211717706 | rs12995612 | - | C>G | 303 | 16169 | 37.14 | 1.102e-09 | 0.7021 |
chr15:47388375 | rs55766414 | - | G>A | 319 | 16853 | 36.74 | 1.35e-09 | 0.7096 |
chr5:54280007 | rs1508890 | ESM1 | C>A | 347 | 18069 | 36.67 | 1.402e-09 | 0.7196 |
chr6:170602429 | rs17860704 | DLL1 | T>C | 200 | 11518 | 36.35 | 1.65e-09 | 0.6515 |
chr14:96192566 | rs58701215 | - | G>C | 458 | 22828 | 36.27 | 1.717e-09 | 0.7513 |
chr15:73142636 | rs4777559 | - | C>T | 272 | 14714 | 36.02 | 1.954e-09 | 0.6927 |
chr19:42393286 | rs717225 | ARHGEF1 | A>G | 428 | 21515 | 35.91 | 2.064e-09 | 0.7453 |
chr2:38009280 | rs13404698 | - | A>G | 2765 | 112638 | 25.68 | 4.039e-07 | 0.9015 |
chr14:45194762 | rs229748 | - | A>G | 7896 | 307717 | 25.25 | 5.047e-07 | 0.9325 |
chr6:25918225 | rs80215559 | SLC17A2 | T>C | 2022 | 67673 | 23.7 | 1.123e-06 | 1.122 |
chr1:11633667 | rs12141055 | - | C>T | 2686 | 91446 | 22.75 | 1.848e-06 | 1.104 |
chr5:127347013 | rs34145453 | - | A>G | 9180 | 328028 | 22.71 | 1.883e-06 | 1.066 |
chr3:43201732 | rs77127731 | - | A>G | 905 | 28774 | 22.56 | 2.033e-06 | 1.177 |
chr8:8569724 | rs883647 | - | G>A | 8924 | 345411 | 22.51 | 2.092e-06 | 0.9378 |
chr5:127548955 | rs36694 | - | A>C | 6522 | 230486 | 22.03 | 2.685e-06 | 1.071 |
chr2:38009156 | rs7568782 | - | A>G | 3430 | 137419 | 21.35 | 3.834e-06 | 0.9174 |
chr1:9338689 | rs10746487 | - | C>T | 6290 | 245811 | 20.96 | 4.686e-06 | 0.9342 |
chr6:32050758 | rs1150754 | TNXB | C>T | 4385 | 153109 | 20.63 | 5.562e-06 | 1.08 |
chr6:25842951 | rs1408272 | SLC17A3 | T>G | 2068 | 69816 | 20.62 | 5.591e-06 | 1.112 |
chr1:11595293 | rs2235661 | DISP3 | A>G | 3523 | 121979 | 20.6 | 5.645e-06 | 1.088 |
chr8:9981854 | rs17689674 | MSRA | C>A | 11128 | 400763 | 20.45 | 6.113e-06 | 1.061 |
chr6:32028149 | rs1150758 | TNXB | G>C | 4378 | 153004 | 20.32 | 6.543e-06 | 1.079 |
chr5:8350701 | rs2136166 | - | G>A | 8419 | 324973 | 20.26 | 6.749e-06 | 0.939 |
chr6:26285683 | rs2393593 | H4C8 | C>T | 11610 | 418950 | 19.92 | 8.082e-06 | 1.06 |
chr2:8193596 | rs72779104 | - | G>A | 3044 | 104845 | 19.9 | 8.162e-06 | 1.092 |
chr9:3248543 | rs636548 | RFX3 | T>G | 3140 | 108332 | 19.78 | 8.687e-06 | 1.09 |
chr5:127552590 | rs2546147 | - | A>G | 6532 | 231676 | 19.77 | 8.73e-06 | 1.068 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr15:48426484 | rs1426654 | SLC24A5 | A>G | 461 | 11267 | 64.37 | 1.029e-15 | 0.6821 |
chr20:2315543 | rs6132532 | AL121899.2 | A>G | 1015 | 21041 | 44.94 | 2.035e-11 | 0.8029 |
chr15:48392165 | rs1834640 | - | A>G | 606 | 13074 | 37.46 | 9.342e-10 | 0.7735 |
chr6:170242949 | rs9396958 | - | T>C | 268 | 6516 | 35.98 | 1.995e-09 | 0.6882 |
chr6:163664217 | rs16894688 | PACRG | A>G | 221 | 5475 | 32.8 | 1.02e-08 | 0.6756 |
chr14:96192566 | rs58701215 | - | G>C | 458 | 10078 | 32.78 | 1.034e-08 | 0.7594 |
chr12:56755058 | rs4301822 | APOF | A>G | 216 | 5325 | 31.03 | 2.535e-08 | 0.6798 |
chr10:49805216 | rs11101394 | ARHGAP22 | C>T | 342 | 7770 | 30.35 | 3.603e-08 | 0.7368 |
chr3:122328753 | rs2173764 | PARP15 | A>G | 249 | 5924 | 29.61 | 5.289e-08 | 0.7033 |
chr5:106908138 | rs163961 | EFNA5 | A>C | 616 | 12856 | 28.93 | 7.502e-08 | 0.7991 |
chr6:3185712 | rs7754077 | - | C>T | 349 | 7816 | 28.28 | 1.049e-07 | 0.7468 |
chr2:36969753 | rs11689624 | VIT | G>C | 2787 | 51629 | 28.25 | 1.067e-07 | 0.8962 |
chr12:29785825 | rs11050328 | TMTC1 | A>C | 1545 | 29669 | 28.11 | 1.147e-07 | 0.867 |
chr15:45491394 | rs1648299 | SHF | T>C | 318 | 7181 | 27.25 | 1.79e-07 | 0.7409 |
chr15:47388375 | rs55766414 | - | G>A | 319 | 7197 | 27.08 | 1.954e-07 | 0.7419 |
chr12:56722060 | rs1918496 | PAN2 | G>T | 203 | 4934 | 27.06 | 1.976e-07 | 0.6894 |
chr6:37145523 | rs10223418 | - | G>T | 201 | 4885 | 26.9 | 2.139e-07 | 0.6889 |
chr5:147863034 | rs9325101 | HTR4 | A>G | 306 | 6907 | 26.08 | 3.268e-07 | 0.7415 |
chr15:73142636 | rs4777559 | - | C>T | 272 | 6238 | 25.85 | 3.689e-07 | 0.7295 |
chr1:204438643 | rs1553921 | PIK3C2B | T>G | 624 | 12868 | 25.81 | 3.768e-07 | 0.8102 |
chr2:38009280 | rs13404698 | - | A>G | 2765 | 50196 | 23.71 | 1.121e-06 | 0.9038 |
chr14:45194762 | rs229748 | - | A>G | 7896 | 137327 | 23.52 | 1.233e-06 | 0.9338 |
chr8:8569724 | rs883647 | - | G>A | 8924 | 154307 | 22.07 | 2.634e-06 | 0.9375 |
chr3:43201732 | rs77127731 | - | A>G | 905 | 12848 | 21.79 | 3.045e-06 | 1.178 |
chr5:127347013 | rs34145453 | - | A>G | 9180 | 146563 | 21.52 | 3.502e-06 | 1.066 |
chr5:8350701 | rs2136166 | - | G>A | 8419 | 145530 | 21.45 | 3.623e-06 | 0.9363 |
chr2:38009156 | rs7568782 | - | A>G | 3430 | 61287 | 19.93 | 8.047e-06 | 0.9189 |
chr1:11633667 | rs12141055 | - | C>T | 2686 | 41016 | 19.89 | 8.221e-06 | 1.099 |
chr2:100670107 | rs11691359 | AFF3 | C>T | 4299 | 66947 | 19.64 | 9.369e-06 | 1.08 |
chr18:36945085 | rs9962046 | - | T>C | 2775 | 42474 | 19.36 | 1.083e-05 | 1.096 |
chr8:11831948 | rs7461062 | DEFB136 | C>T | 11332 | 194020 | 19.2 | 1.179e-05 | 0.9434 |
chr11:96046947 | rs78482221 | MAML2 | A>G | 617 | 12231 | 18.85 | 1.413e-05 | 0.8342 |
chr8:9981854 | rs17689674 | MSRA | C>A | 11128 | 179185 | 18.34 | 1.848e-05 | 1.059 |
chr1:84948165 | rs6684882 | RPF1 | A>G | 2500 | 38226 | 18.33 | 1.857e-05 | 1.098 |
chr8:840094 | rs77263188 | DLGAP2 | A>G | 272 | 5875 | 18.25 | 1.934e-05 | 0.7666 |
chr6:29324599 | rs10484546 | OR5V1 | A>C | 3034 | 54073 | 18.13 | 2.058e-05 | 0.9183 |
chr5:7316956 | rs11750162 | - | A>G | 6307 | 109830 | 18.11 | 2.09e-05 | 0.9378 |
chr13:108157360 | rs78056606 | FAM155A | T>C | 1398 | 20732 | 17.95 | 2.265e-05 | 1.128 |
chr5:127548955 | rs36694 | - | A>C | 6522 | 103393 | 17.82 | 2.434e-05 | 1.065 |
chr14:79218828 | rs76995606 | NRXN3 | C>G | 779 | 11093 | 17.82 | 2.427e-05 | 1.172 |
ID | Name | Top Correlation |
---|---|---|
ICD: D892 | Hypergammaglobulinaemia, unspecified | 1/20 |
ICD: L031 | Cellulitis of other parts of limb | 10/20 |