Case | Control |
---|---|
73739 | 386455 |
An anomaly of the lymphatic system, a network of lymphatic vessels that carry a clear fluid called lymph unidirectionally towards either the right lymphatic duct or the thoracic duct, which in turn drain into the right and left subclavian veins respectively. [HPO:probinson]
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr1:169519049 | rs6025 | F5 | C>T | 3883 | 17830 | 54.89 | 1.272e-13 | 1.142 |
chr23:64367019 | rs7064929 | - | G>A | 3153 | 14413 | 49.49 | 1.992e-12 | 1.15 |
chr23:142717383 | rs73577386 | SLITRK4 | A>G | 1428 | 6194 | 42.15 | 8.432e-11 | 1.211 |
chr23:63423664 | rs5964740 | AMER1 | C>T | 4223 | 19877 | 41.59 | 1.127e-10 | 1.118 |
chr23:63410110 | rs61730681 | AMER1 | T>C | 4221 | 19912 | 39.77 | 2.861e-10 | 1.115 |
chr23:67891077 | rs7886230 | STARD8 | T>C | 6763 | 32670 | 39.16 | 3.898e-10 | 1.09 |
chr23:109671384 | rs768312 | AMMECR1 | T>C | 2782 | 12857 | 36.82 | 1.297e-09 | 1.137 |
chr2:26113913 | rs78404020 | - | A>G | 1961 | 11856 | 36.22 | 1.766e-09 | 0.8628 |
chr23:10722712 | rs7878745 | MID1 | T>C | 12319 | 61069 | 34.88 | 3.502e-09 | 1.063 |
chr23:110685534 | rs16986503 | - | C>T | 2237 | 10246 | 33.9 | 5.812e-09 | 1.147 |
chr9:136143442 | rs612169 | ABO | A>G | 51808 | 264646 | 33.52 | 7.053e-09 | 1.035 |
chr9:136149229 | rs505922 | ABO | T>C | 51257 | 261803 | 33.23 | 8.204e-09 | 1.034 |
chr23:148151708 | Affx-34694529 | - | A>C | 1614 | 7237 | 32.59 | 1.14e-08 | 1.171 |
chr9:136137065 | rs687621 | ABO | A>G | 51712 | 264253 | 32.19 | 1.4e-08 | 1.034 |
chr23:10867175 | rs6530417 | - | C>G | 12368 | 61484 | 32.19 | 1.401e-08 | 1.061 |
chr23:153733911 | rs5986987 | - | C>G | 2044 | 9337 | 32.03 | 1.516e-08 | 1.149 |
chr18:74451915 | rs75755544 | - | C>T | 2053 | 12248 | 31.39 | 2.107e-08 | 0.8742 |
chr23:106146349 | rs5962774 | MORC4 | T>C | 1980 | 9046 | 31.05 | 2.518e-08 | 1.149 |
chr23:55985953 | rs7885685 | - | A>G | 5161 | 24910 | 30.11 | 4.077e-08 | 1.09 |
chr9:136142203 | rs514659 | ABO | A>C | 49859 | 255061 | 29.98 | 4.357e-08 | 1.033 |
chr1:169519049 | rs6025 | F5 | C>T | 3770 | 17312 | 55.41 | 9.772e-14 | 1.145 |
chr9:136149229 | rs505922 | ABO | T>C | 47660 | 244233 | 28.88 | 7.685e-08 | 1.033 |
chr9:136143442 | rs612169 | ABO | A>G | 47845 | 245298 | 27.84 | 1.318e-07 | 1.033 |
chr1:169514006 | rs1018827 | F5 | G>A | 9283 | 45913 | 27.47 | 1.596e-07 | 1.064 |
chr9:136137065 | rs687621 | ABO | A>G | 47753 | 244994 | 26.57 | 2.547e-07 | 1.032 |
chr2:22515568 | rs12373752 | - | A>G | 70284 | 362613 | 26.49 | 2.647e-07 | 1.03 |
chr1:169477574 | rs6687813 | - | C>A | 9234 | 45757 | 25.75 | 3.886e-07 | 1.062 |
chr1:169491555 | rs2420371 | F5 | A>G | 9234 | 45775 | 25.29 | 4.939e-07 | 1.061 |
chr9:136155000 | rs635634 | - | C>T | 27424 | 139538 | 24.49 | 7.487e-07 | 1.037 |
chr9:136142203 | rs514659 | ABO | A>C | 46147 | 236987 | 24.48 | 7.516e-07 | 1.031 |
chr9:136139265 | rs657152 | ABO | C>A | 50805 | 261166 | 24.22 | 8.583e-07 | 1.03 |
chr3:3472604 | rs6772761 | - | C>T | 35447 | 190340 | 24.05 | 9.396e-07 | 0.9679 |
chr16:30566747 | rs17850402 | ZNF764 | G>A | 15112 | 75963 | 23.97 | 9.797e-07 | 1.047 |
chr9:136149399 | rs507666 | ABO | G>A | 27603 | 140521 | 23.5 | 1.252e-06 | 1.036 |
chr9:10615489 | rs6474563 | - | A>G | 13948 | 70069 | 23.23 | 1.438e-06 | 1.048 |
chr9:126701570 | rs62579217 | - | A>G | 8027 | 39726 | 23.14 | 1.509e-06 | 1.062 |
chr9:136142355 | rs643434 | ABO | G>A | 50961 | 262063 | 23.01 | 1.609e-06 | 1.029 |
chr9:136132908 | rs8176719 | ABO | T>TC | 50804 | 261479 | 22.91 | 1.701e-06 | 1.029 |
chr18:50723283 | rs17487484 | DCC | T>G | 74693 | 386111 | 22.52 | 2.076e-06 | 1.028 |
chr4:37196736 | rs115544851 | - | T>C | 4743 | 23073 | 22.51 | 2.087e-06 | 1.08 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr1:169519049 | rs6025 | F5 | C>T | 3770 | 9889 | 62.59 | 2.543e-15 | 1.166 |
chr9:136149229 | rs505922 | ABO | T>C | 47660 | 141529 | 33.21 | 8.271e-09 | 1.038 |
chr9:136143442 | rs612169 | ABO | A>G | 47845 | 142128 | 32.61 | 1.126e-08 | 1.037 |
chr9:136137065 | rs687621 | ABO | A>G | 47753 | 141968 | 30.55 | 3.245e-08 | 1.036 |
chr1:169514006 | rs1018827 | F5 | G>A | 9283 | 26515 | 30.16 | 3.986e-08 | 1.071 |
chr9:136142203 | rs514659 | ABO | A>C | 46147 | 137373 | 28.62 | 8.826e-08 | 1.035 |
chr9:136139265 | rs657152 | ABO | C>A | 50805 | 151378 | 28.42 | 9.779e-08 | 1.034 |
chr9:136142355 | rs643434 | ABO | G>A | 50961 | 151872 | 27.26 | 1.774e-07 | 1.034 |
chr9:136132908 | rs8176719 | ABO | T>TC | 50804 | 151580 | 27.06 | 1.968e-07 | 1.034 |
chr1:169477574 | rs6687813 | - | C>A | 9234 | 26484 | 26.5 | 2.64e-07 | 1.066 |
chr1:169491555 | rs2420371 | F5 | A>G | 9234 | 26514 | 25.4 | 4.668e-07 | 1.065 |
chr9:136155000 | rs635634 | - | C>T | 27424 | 80984 | 23.98 | 9.742e-07 | 1.039 |
chr2:63149557 | rs2710642 | EHBP1 | A>G | 47492 | 147771 | 23.85 | 1.04e-06 | 0.9692 |
chr9:10615489 | rs6474563 | - | A>G | 13948 | 40604 | 23.8 | 1.068e-06 | 1.052 |
chr1:169099137 | rs75112989 | ATP1B1 | G>A | 8870 | 25500 | 23.35 | 1.347e-06 | 1.063 |
chr9:136149399 | rs507666 | ABO | G>A | 27603 | 81577 | 22.84 | 1.764e-06 | 1.038 |
chr21:40112319 | rs2836654 | - | T>C | 56653 | 175341 | 22.81 | 1.788e-06 | 0.9701 |
chr6:69053045 | rs78677827 | - | G>A | 3030 | 10180 | 22.56 | 2.041e-06 | 0.9055 |
chr1:169428944 | rs1208134 | CCDC181 | T>C | 8714 | 25100 | 21.34 | 3.843e-06 | 1.061 |
chr11:86968612 | rs117641739 | TMEM135 | A>G | 6430 | 18338 | 21.3 | 3.935e-06 | 1.071 |