Case | Control |
---|---|
108265 | 351929 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr15:48426484 | rs1426654 | SLC24A5 | A>G | 4909 | 22617 | 476.8 | 1.061e-105 | 0.7074 |
chr15:48392165 | rs1834640 | - | A>G | 5925 | 25699 | 383.4 | 2.305e-85 | 0.7518 |
chr5:33951693 | rs16891982 | SLC45A2 | G>C | 13838 | 53220 | 289.5 | 6.458e-65 | 0.8457 |
chr1:159174683 | rs2814778 | ACKR1 | T>C | 3530 | 15847 | 287.4 | 1.83e-64 | 0.7284 |
chr8:145639681 | rs1871534 | SLC39A4 | G>C | 3296 | 14849 | 274.6 | 1.116e-61 | 0.726 |
chr5:33958959 | rs28777 | SLC45A2 | A>C | 11680 | 45312 | 269.7 | 1.312e-60 | 0.8395 |
chr13:72441665 | rs3759505 | - | C>T | 3014 | 13701 | 266.0 | 8.374e-60 | 0.7196 |
chr16:7465748 | rs4786166 | RBFOX1 | C>T | 3243 | 14551 | 262.9 | 3.964e-59 | 0.729 |
chr5:147671850 | rs7724380 | - | G>A | 3753 | 16430 | 257.6 | 5.769e-58 | 0.7468 |
chr19:42393286 | rs717225 | ARHGEF1 | A>G | 4122 | 17821 | 257.3 | 6.506e-58 | 0.7565 |
chr5:147863034 | rs9325101 | HTR4 | A>G | 3037 | 13703 | 254.8 | 2.307e-57 | 0.7253 |
chr12:3417813 | rs729914 | - | G>T | 2908 | 13179 | 251.4 | 1.299e-56 | 0.722 |
chr13:72463541 | rs1460465 | - | A>G | 2917 | 13207 | 249.9 | 2.739e-56 | 0.7231 |
chr17:58786625 | rs2643103 | BCAS3 | G>A | 3572 | 15686 | 249.6 | 3.212e-56 | 0.745 |
chr8:10557760 | rs57041981 | RP1L1 | A>G | 3032 | 13616 | 246.9 | 1.249e-55 | 0.7287 |
chr17:58508582 | rs8071181 | C17orf64 | G>A | 2778 | 12639 | 245.6 | 2.324e-55 | 0.7195 |
chr13:113979968 | rs200506581 | GRTP1 | C>CCACA | 2228 | 10498 | 243.5 | 6.768e-55 | 0.6949 |
chr13:113979972 | Affx-80297025 | GRTP1 | A>ACACT | 2226 | 10481 | 241.9 | 1.486e-54 | 0.6956 |
chr5:147666044 | rs7707813 | - | T>C | 3489 | 15274 | 238.6 | 7.986e-54 | 0.7473 |
chr19:42392441 | rs16975619 | ARHGEF1 | T>C | 3753 | 16257 | 237.8 | 1.217e-53 | 0.7552 |
chr11:32473807 | rs3858455 | - | T>C | 86037 | 288320 | 104.9 | 1.29e-24 | 0.9499 |
chr2:56096892 | rs3791679 | EFEMP1 | A>G | 47365 | 161032 | 96.81 | 7.644e-23 | 0.9434 |
chr2:56111309 | rs3791675 | EFEMP1 | C>T | 49033 | 166373 | 89.81 | 2.624e-21 | 0.9461 |
chr2:56040099 | rs10199082 | - | T>C | 30379 | 93370 | 83.59 | 6.09e-20 | 1.067 |
chr2:56189500 | rs74938797 | - | T>C | 79646 | 265892 | 70.29 | 5.11e-17 | 0.9581 |
chr2:56199556 | rs55805406 | - | G>A | 82435 | 274854 | 66.31 | 3.862e-16 | 0.9596 |
chr11:32499831 | rs10835923 | - | G>A | 44131 | 148803 | 60.54 | 7.209e-15 | 0.9537 |
chr11:32518198 | rs7129461 | - | C>T | 109323 | 348667 | 58.92 | 1.639e-14 | 1.039 |
chr2:20878105 | rs9306894 | GDF7 | A>G | 78468 | 248854 | 56.97 | 4.426e-14 | 1.039 |
chr1:218521609 | rs2799098 | TGFB2 | A>G | 37505 | 126492 | 47.63 | 5.152e-12 | 0.9563 |
chr6:27734470 | rs9366702 | - | T>C | 53067 | 177657 | 47.02 | 7.021e-12 | 0.9616 |
chr6:26755915 | rs13213200 | - | C>T | 24319 | 82863 | 46.91 | 7.415e-12 | 0.9483 |
chr11:32456562 | rs1799925 | WT1 | G>A | 28425 | 96459 | 46.54 | 8.976e-12 | 0.9517 |
chr6:27730463 | rs7759217 | - | A>G | 54004 | 180628 | 45.78 | 1.324e-11 | 0.9624 |
chr2:55987068 | rs6755214 | - | A>G | 64722 | 215782 | 45.42 | 1.594e-11 | 0.9645 |
chr6:27739254 | rs742046 | - | T>C | 54102 | 180889 | 44.88 | 2.1e-11 | 0.9628 |
chr6:27879200 | rs34788973 | OR2B2 | C>A | 22237 | 75806 | 44.65 | 2.358e-11 | 0.9475 |
chr6:27251379 | rs13207082 | - | A>G | 22547 | 76855 | 44.43 | 2.637e-11 | 0.948 |
chr6:27719375 | rs9461405 | - | G>T | 55515 | 185505 | 44.29 | 2.828e-11 | 0.9633 |
chr6:27413924 | rs13195040 | - | A>G | 23180 | 78970 | 44.27 | 2.865e-11 | 0.9487 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds ratio |
---|---|---|---|---|---|---|---|---|
chr6:26510748 | rs3799383 | - | C>T | 28519 | 20942 | 69.91 | 6.21e-17 | 0.9213 |
chr6:26573631 | rs13214027 | - | C>G | 29857 | 21882 | 68.99 | 9.902e-17 | 0.9232 |
chr6:27251379 | rs13207082 | - | A>G | 22547 | 16700 | 68.42 | 1.319e-16 | 0.9144 |
chr6:26409890 | rs41266839 | BTN3A1 | G>C | 22462 | 16648 | 68.12 | 1.536e-16 | 0.9145 |
chr6:26755915 | rs13213200 | - | C>T | 24319 | 17972 | 68.01 | 1.627e-16 | 0.9172 |
chr6:27185664 | rs13219354 | - | T>C | 28136 | 20645 | 66.83 | 2.962e-16 | 0.9226 |
chr6:27229265 | rs4452638 | - | G>A | 28120 | 20622 | 66.4 | 3.675e-16 | 0.9228 |
chr6:26463575 | rs13195402 | BTN2A1 | G>T | 22089 | 16340 | 66.03 | 4.437e-16 | 0.915 |
chr6:26582035 | rs13198716 | - | C>T | 22529 | 16656 | 65.59 | 5.54e-16 | 0.9161 |
chr6:27413924 | rs13195040 | - | A>G | 23180 | 17128 | 65.3 | 6.446e-16 | 0.9172 |
chr6:30363351 | rs3094034 | - | A>T | 27553 | 20206 | 64.38 | 1.028e-15 | 0.9233 |
chr6:27879200 | rs34788973 | OR2B2 | C>A | 22237 | 16441 | 63.96 | 1.267e-15 | 0.9165 |
chr6:26392515 | rs2072803 | BTN2A2 | G>C | 27929 | 20457 | 63.73 | 1.424e-15 | 0.9241 |
chr11:32473807 | rs3858455 | - | T>C | 86037 | 60800 | 63.46 | 1.633e-15 | 0.9467 |
chr6:27840926 | rs45509595 | - | T>C | 23350 | 17223 | 63.25 | 1.824e-15 | 0.9187 |
chr6:26582327 | rs9393735 | - | A>G | 29545 | 21587 | 63.1 | 1.967e-15 | 0.9261 |
chr6:26463660 | rs13195509 | BTN2A1 | G>A | 24955 | 18349 | 62.79 | 2.302e-15 | 0.9211 |
chr6:28124114 | rs13205911 | ZKSCAN8 | C>T | 23491 | 17318 | 62.08 | 3.306e-15 | 0.9196 |
chr6:27884012 | rs13218875 | - | C>T | 23699 | 17454 | 61.92 | 3.583e-15 | 0.92 |
chr6:26474044 | rs7773938 | BTN2A1 | C>T | 40058 | 28956 | 61.91 | 3.595e-15 | 0.9347 |