A41.1

Case	Control
223	459982

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds Ratio
chr3:105472282	rs34736627	CBLB	T>C	23	17930	24.81	6.341e-07	2.776
chr3:1549863	rs17040585	-	G>A	19	13753	23.74	1.105e-06	2.967
chr3:9340324	rs35984519	SRGAP3	T>G	121	170424	23.62	1.174e-06	1.664
chr9:13184696	rs55676259	MPDZ	T>C	19	14337	22.83	1.767e-06	2.915
chr18:23171791	rs4800227	-	T>C	25	20980	22.81	1.784e-06	2.577
chr8:61209152	rs7820639	-	A>G	80	102510	22.24	2.401e-06	1.772
chr11:98292823	rs117386456	-	G>A	18	13161	22.08	2.621e-06	2.937
chr17:77325299	rs62061499	RBFOX3	A>G	50	55640	21.82	2.996e-06	1.986
chr5:9156482	rs78246443	SEMA5A	C>T	15	10129	21.69	3.211e-06	3.182
chr16:4061307	rs117808654	ADCY9	G>A	19	14563	21.05	4.47e-06	2.8
chr3:9342231	rs11706211	SRGAP3	G>C	100	137171	20.88	4.897e-06	1.666
chr11:87250658	rs117199176	-	A>G	26	23137	20.68	5.431e-06	2.432
chr21:47608580	rs2968	LSS	A>G	246	414931	20.58	5.716e-06	1.52
chr11:6489094	rs12419488	TRIM3	G>A	21	17103	20.46	6.089e-06	2.643
chr8:118144674	rs118036418	SLC30A8	G>A	29	27382	20.34	6.492e-06	2.318
chr3:72622464	rs74957747	-	G>A	52	60270	19.85	8.355e-06	1.905
chr12:3707781	rs73045232	-	G>A	38	40036	19.67	9.185e-06	2.085
chr13:66350716	rs4349038	-	C>T	140	210988	19.15	1.209e-05	1.551
chr5:2947971	rs75904749	-	G>A	37	39390	19.1	1.237e-05	2.082
chr21:17910459	rs17276124	-	A>C	54	63926	19.05	1.275e-05	1.862
chr24:14850341	rs2032598	USP9Y	T>C	1	57	27.0	2.03e-07	29.67
chr9:13184696	rs55676259	MPDZ	T>C	19	13907	23.5	1.247e-06	2.96
chr3:105472282	rs34736627	CBLB	T>C	22	17375	22.31	2.324e-06	2.697
chr5:55828080	rs58896078	-	C>T	23	18575	22.21	2.448e-06	2.641
chr5:9156482	rs78246443	SEMA5A	C>T	15	9918	21.94	2.809e-06	3.204
chr11:98292823	rs117386456	-	G>A	18	13014	21.9	2.869e-06	2.928
chr3:9340324	rs35984519	SRGAP3	T>G	116	162494	21.61	3.348e-06	1.645
chr7:14115563	rs73679291	-	G>A	42	43686	21.5	3.537e-06	2.088
chr16:4061307	rs117808654	ADCY9	G>A	19	14346	21.04	4.495e-06	2.802
chr15:44278161	rs2412850	FRMD5	G>A	41	42751	20.95	4.711e-06	2.084
chr15:44412598	rs2615295	FRMD5	T>C	41	42785	20.89	4.854e-06	2.082
chr23:38258157	rs76161913	AF241726.2	T>C	20	16731	20.86	4.93e-06	2.75
chr7:37075502	rs6946562	ELMO1	A>G	44	47026	20.81	5.06e-06	2.034
chr11:87250658	rs117199176	-	A>G	26	22754	20.77	5.181e-06	2.439
chr15:44390286	rs2042741	FRMD5	C>T	41	42917	20.62	5.594e-06	2.072
chr12:79490847	rs79550801	SYT1	T>C	14	9315	20.04	7.565e-06	3.164
chr15:44218136	rs481837	FRMD5	C>T	37	37545	20.03	7.632e-06	2.119
chr3:72622464	rs74957747	-	G>A	52	59318	19.95	7.941e-06	1.912
chr5:167058405	rs6867945	TENM2	A>G	17	12556	19.91	8.138e-06	2.871
chr15:81004649	rs72736104	ABHD17C	G>A	59	70114	19.87	8.306e-06	1.847
chr24:14850341	rs2032598	USP9Y	T>C	1	57	27.0	2.03e-07	29.67
chr9:13184696	rs55676259	MPDZ	T>C	19	13907	23.5	1.247e-06	2.96
chr3:105472282	rs34736627	CBLB	T>C	22	17375	22.31	2.324e-06	2.697
chr5:55828080	rs58896078	-	C>T	23	18575	22.21	2.448e-06	2.641
chr5:9156482	rs78246443	SEMA5A	C>T	15	9918	21.94	2.809e-06	3.204
chr11:98292823	rs117386456	-	G>A	18	13014	21.9	2.869e-06	2.928
chr3:9340324	rs35984519	SRGAP3	T>G	116	162494	21.61	3.348e-06	1.645
chr7:14115563	rs73679291	-	G>A	42	43686	21.5	3.537e-06	2.088
chr16:4061307	rs117808654	ADCY9	G>A	19	14346	21.04	4.495e-06	2.802
chr15:44278161	rs2412850	FRMD5	G>A	41	42751	20.95	4.711e-06	2.084
chr15:44412598	rs2615295	FRMD5	T>C	41	42785	20.89	4.854e-06	2.082
chr23:38258157	rs76161913	AF241726.2	T>C	20	16731	20.86	4.93e-06	2.75
chr7:37075502	rs6946562	ELMO1	A>G	44	47026	20.81	5.06e-06	2.034
chr11:87250658	rs117199176	-	A>G	26	22754	20.77	5.181e-06	2.439
chr15:44390286	rs2042741	FRMD5	C>T	41	42917	20.62	5.594e-06	2.072
chr12:79490847	rs79550801	SYT1	T>C	14	9315	20.04	7.565e-06	3.164
chr15:44218136	rs481837	FRMD5	C>T	37	37545	20.03	7.632e-06	2.119
chr3:72622464	rs74957747	-	G>A	52	59318	19.95	7.941e-06	1.912
chr5:167058405	rs6867945	TENM2	A>G	17	12556	19.91	8.138e-06	2.871
chr15:81004649	rs72736104	ABHD17C	G>A	59	70114	19.87	8.306e-06	1.847

Location

SNP

Gene

Ref>Alt

Alt in Case

Alt in Control

Chi-square

P-value

Odds Ratio

chr3:105472282

rs34736627

CBLB

T>C

23

17930

24.81

6.341e-07

2.776

chr3:1549863

rs17040585

-

G>A

19

13753

23.74

1.105e-06

2.967

chr3:9340324

rs35984519

SRGAP3

T>G

121

170424

23.62

1.174e-06

1.664

chr9:13184696

rs55676259

MPDZ

T>C

19

14337

22.83

1.767e-06

2.915

chr18:23171791

rs4800227

-

T>C

25

20980

22.81

1.784e-06

2.577

chr8:61209152

rs7820639

-

A>G

80

102510

22.24

2.401e-06

1.772

chr11:98292823

rs117386456

-

G>A

18

13161

22.08

2.621e-06

2.937

chr17:77325299

rs62061499

RBFOX3

A>G

50

55640

21.82

2.996e-06

1.986

chr5:9156482

rs78246443

SEMA5A

C>T

15

10129

21.69

3.211e-06

3.182

chr16:4061307

rs117808654

ADCY9

G>A

19

14563

21.05

4.47e-06

2.8

chr3:9342231

rs11706211

SRGAP3

G>C

100

137171

20.88

4.897e-06

1.666

chr11:87250658

rs117199176

-

A>G

26

23137

20.68

5.431e-06

2.432

chr21:47608580

rs2968

LSS

A>G

246

414931

20.58

5.716e-06

1.52

chr11:6489094

rs12419488

TRIM3

G>A

21

17103

20.46

6.089e-06

2.643

chr8:118144674

rs118036418

SLC30A8

G>A

29

27382

20.34

6.492e-06

2.318

chr3:72622464

rs74957747

-

G>A

52

60270

19.85

8.355e-06

1.905

chr12:3707781

rs73045232

-

G>A

38

40036

19.67

9.185e-06

2.085

chr13:66350716

rs4349038

-

C>T

140

210988

19.15

1.209e-05

1.551

chr5:2947971

rs75904749

-

G>A

37

39390

19.1

1.237e-05

2.082

chr21:17910459

rs17276124

-

A>C

54

63926

19.05

1.275e-05

1.862

chr24:14850341

rs2032598

USP9Y

T>C

1

57

27.0

2.03e-07

29.67

chr9:13184696

rs55676259

MPDZ

T>C

19

13907

23.5

1.247e-06

2.96

chr3:105472282

rs34736627

CBLB

T>C

22

17375

22.31

2.324e-06

2.697

chr5:55828080

rs58896078

-

C>T

23

18575

22.21

2.448e-06

2.641

chr5:9156482

rs78246443

SEMA5A

C>T

15

9918

21.94

2.809e-06

3.204

chr11:98292823

rs117386456

-

G>A

18

13014

21.9

2.869e-06

2.928

chr3:9340324

rs35984519

SRGAP3

T>G

116

162494

21.61

3.348e-06

1.645

chr7:14115563

rs73679291

-

G>A

42

43686

21.5

3.537e-06

2.088

chr16:4061307

rs117808654

ADCY9

G>A

19

14346

21.04

4.495e-06

2.802

chr15:44278161

rs2412850

FRMD5

G>A

41

42751

20.95

4.711e-06

2.084

chr15:44412598

rs2615295

FRMD5

T>C

41

42785

20.89

4.854e-06

2.082

chr23:38258157

rs76161913

AF241726.2

T>C

20

16731

20.86

4.93e-06

2.75

chr7:37075502

rs6946562

ELMO1

A>G

44

47026

20.81

5.06e-06

2.034

chr11:87250658

rs117199176

-

A>G

26

22754

20.77

5.181e-06

2.439

chr15:44390286

rs2042741

FRMD5

C>T

41

42917

20.62

5.594e-06

2.072

chr12:79490847

rs79550801

SYT1

T>C

14

9315

20.04

7.565e-06

3.164

chr15:44218136

rs481837

FRMD5

C>T

37

37545

20.03

7.632e-06

2.119

chr3:72622464

rs74957747

-

G>A

52

59318

19.95

7.941e-06

1.912

chr5:167058405

rs6867945

TENM2

A>G

17

12556

19.91

8.138e-06

2.871

chr15:81004649

rs72736104

ABHD17C

G>A

59

70114

19.87

8.306e-06

1.847

chr24:14850341

rs2032598

USP9Y

T>C

1

57

27.0

2.03e-07

29.67

chr9:13184696

rs55676259

MPDZ

T>C

19

13907

23.5

1.247e-06

2.96

chr3:105472282

rs34736627

CBLB

T>C

22

17375

22.31

2.324e-06

2.697

chr5:55828080

rs58896078

-

C>T

23

18575

22.21

2.448e-06

2.641

chr5:9156482

rs78246443

SEMA5A

C>T

15

9918

21.94

2.809e-06

3.204

chr11:98292823

rs117386456

-

G>A

18

13014

21.9

2.869e-06

2.928

chr3:9340324

rs35984519

SRGAP3

T>G

116

162494

21.61

3.348e-06

1.645

chr7:14115563

rs73679291

-

G>A

42

43686

21.5

3.537e-06

2.088

chr16:4061307

rs117808654

ADCY9

G>A

19

14346

21.04

4.495e-06

2.802

chr15:44278161

rs2412850

FRMD5

G>A

41

42751

20.95

4.711e-06

2.084

chr15:44412598

rs2615295

FRMD5

T>C

41

42785

20.89

4.854e-06

2.082

chr23:38258157

rs76161913

AF241726.2

T>C

20

16731

20.86

4.93e-06

2.75

chr7:37075502

rs6946562

ELMO1

A>G

44

47026

20.81

5.06e-06

2.034

chr11:87250658

rs117199176

-

A>G

26

22754

20.77

5.181e-06

2.439

chr15:44390286

rs2042741

FRMD5

C>T

41

42917

20.62

5.594e-06

2.072

chr12:79490847

rs79550801

SYT1

T>C

14

9315

20.04

7.565e-06

3.164

chr15:44218136

rs481837

FRMD5

C>T

37

37545

20.03

7.632e-06

2.119

chr3:72622464

rs74957747

-

G>A

52

59318

19.95

7.941e-06

1.912

chr5:167058405

rs6867945

TENM2

A>G

17

12556

19.91

8.138e-06

2.871

chr15:81004649

rs72736104

ABHD17C

G>A

59

70114

19.87

8.306e-06

1.847

ID	Name	Top Correlation
HP: 0000118	Phenotypic abnormality	0/20
HP: 0000924	Abnormality of the skeletal system	0/20
HP: 0001626	Abnormality of the cardiovascular system	0/20
HP: 0001627	Abnormal heart morphology	0/20
HP: 0002715	Abnormality of the immune system	0/20
HP: 0002754	Osteomyelitis	0/20
HP: 0004306	Abnormal endocardium morphology	0/20
HP: 0010978	Abnormality of immune system physiology	0/20
HP: 0011843	Abnormality of skeletal physiology	0/20
HP: 0012647	Abnormal inflammatory response	0/20
HP: 0012649	Increased inflammatory response	0/20
HP: 0030680	Abnormality of cardiovascular system morphology	0/20
HP: 0031690	Opportunistic infection	0/20
HP: 0032101	Unusual infection	0/20
HP: 0032260	Opportunistic bacterial infection	0/20
HP: 0032262	Pulmonary tuberculosis	0/20
HP: 0100584	Endocarditis	0/20

Septicaemia due to other specified staphylococcus

A41.1

Case/Control GWAS ^ⓘ

Links

Statistics

Top SNP Information

Associated Phenotypes ^ⓘ

Septicaemia due to other specified staphylococcus

A41.1

Case/Control GWAS ⓘ

Links

Statistics

Top SNP Information Show Table

Associated Phenotypes ⓘ Shared SNP phenotypes No shared SNP phenotypes

Case/Control GWAS ^ⓘ

Top SNP Information

Associated Phenotypes ^ⓘ