Case | Control |
---|---|
333 | 459872 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds Ratio |
---|---|---|---|---|---|---|---|---|
chr20:5223865 | rs78863898 | - | G>A | 22 | 10604 | 25.12 | 5.383e-07 | 2.826 |
chr17:46792918 | rs77753764 | - | C>T | 71 | 53921 | 24.65 | 6.857e-07 | 1.843 |
chr4:188929600 | rs6812408 | - | A>G | 147 | 134510 | 24.41 | 7.789e-07 | 1.572 |
chr5:78202968 | rs11747224 | ARSB | C>T | 101 | 85123 | 24.18 | 8.778e-07 | 1.687 |
chr11:47519492 | rs72907957 | CELF1 | G>C | 32 | 18845 | 23.0 | 1.62e-06 | 2.322 |
chr18:77755460 | rs57083541 | TXNL4A | T>C | 33 | 19735 | 22.92 | 1.687e-06 | 2.292 |
chr4:178787983 | rs62342770 | - | C>T | 30 | 17353 | 22.58 | 2.011e-06 | 2.363 |
chr9:127676918 | rs74759033 | GOLGA1 | G>A | 50 | 35058 | 22.34 | 2.284e-06 | 1.974 |
chr5:130276362 | rs2419757 | - | A>T | 28 | 16308 | 20.94 | 4.746e-06 | 2.355 |
chr1:5816959 | rs80030164 | - | G>A | 21 | 10832 | 20.84 | 4.98e-06 | 2.647 |
chr10:3381474 | rs10751920 | - | T>C | 68 | 53849 | 20.78 | 5.151e-06 | 1.774 |
chr2:127646281 | rs7570970 | - | C>T | 138 | 129985 | 20.68 | 5.435e-06 | 1.533 |
chr11:55540964 | rs117263837 | OR5D13 | G>T | 20 | 10104 | 20.63 | 5.577e-06 | 2.691 |
chr5:169473172 | rs10075025 | DOCK2 | A>G | 31 | 18978 | 20.21 | 6.933e-06 | 2.234 |
chr6:31214171 | rs73405036 | - | G>A | 30 | 18303 | 19.69 | 9.09e-06 | 2.239 |
chr16:28974658 | rs8044999 | NFATC2IP | A>G | 37 | 24408 | 19.66 | 9.251e-06 | 2.08 |
chr1:20972111 | rs3738136 | PINK1 | G>A | 60 | 46681 | 19.6 | 9.55e-06 | 1.802 |
chr2:48633406 | rs75792391 | - | C>A | 33 | 20932 | 19.53 | 9.895e-06 | 2.157 |
chr3:153522213 | rs73174118 | - | A>G | 23 | 12698 | 19.49 | 1.01e-05 | 2.472 |
chr9:92118959 | rs4877100 | - | A>G | 65 | 51305 | 19.4 | 1.063e-05 | 1.76 |
chr18:77755460 | rs57083541 | TXNL4A | T>C | 29 | 15551 | 28.34 | 1.018e-07 | 2.646 |
chr23:151996723 | rs142811420 | CETN2 | T>C | 21 | 11427 | 24.2 | 8.673e-07 | 2.859 |
chr11:47519492 | rs72907957 | CELF1 | G>C | 31 | 18624 | 23.04 | 1.591e-06 | 2.356 |
chr3:153522213 | rs73174118 | - | A>G | 23 | 12392 | 22.29 | 2.341e-06 | 2.625 |
chr2:48633406 | rs75792391 | - | C>A | 33 | 20624 | 22.25 | 2.391e-06 | 2.27 |
chr4:33767083 | rs73222427 | - | G>A | 22 | 11576 | 22.24 | 2.406e-06 | 2.673 |
chr2:235989360 | rs77888970 | - | G>A | 22 | 11362 | 22.15 | 2.521e-06 | 2.671 |
chr8:35831522 | rs118039006 | - | T>C | 22 | 12056 | 20.54 | 5.843e-06 | 2.58 |
chr10:3381474 | rs10751920 | - | T>C | 58 | 45891 | 20.04 | 7.569e-06 | 1.834 |
chr6:502106 | rs75891606 | EXOC2 | A>G | 59 | 46638 | 19.88 | 8.229e-06 | 1.822 |
chr1:20972111 | rs3738136 | PINK1 | G>A | 53 | 41156 | 19.67 | 9.187e-06 | 1.869 |
chr4:188929600 | rs6812408 | - | A>G | 125 | 119212 | 19.63 | 9.394e-06 | 1.547 |
chr9:127676918 | rs74759033 | GOLGA1 | G>A | 46 | 33875 | 19.52 | 9.966e-06 | 1.941 |
chr15:49480222 | rs111395635 | GALK2 | A>C | 33 | 21669 | 19.46 | 1.028e-05 | 2.158 |
chr11:55540964 | rs117263837 | OR5D13 | G>T | 19 | 9999 | 19.25 | 1.146e-05 | 2.67 |
chr12:92071674 | rs118134441 | - | T>C | 22 | 12354 | 19.19 | 1.185e-05 | 2.504 |
chr3:52414112 | rs73072968 | DNAH1 | C>T | 32 | 20917 | 19.09 | 1.248e-05 | 2.166 |
chr11:48099242 | rs72901575 | PTPRJ | G>A | 30 | 19242 | 19.0 | 1.308e-05 | 2.212 |
chr2:83936401 | rs114861441 | - | C>T | 19 | 10055 | 18.99 | 1.315e-05 | 2.654 |
chr2:48076548 | rs75315139 | FBXO11 | A>G | 33 | 21958 | 18.86 | 1.406e-05 | 2.134 |
chr18:77755460 | rs57083541 | TXNL4A | T>C | 29 | 15551 | 28.34 | 1.018e-07 | 2.646 |
chr23:151996723 | rs142811420 | CETN2 | T>C | 21 | 11427 | 24.2 | 8.673e-07 | 2.859 |
chr11:47519492 | rs72907957 | CELF1 | G>C | 31 | 18624 | 23.04 | 1.591e-06 | 2.356 |
chr3:153522213 | rs73174118 | - | A>G | 23 | 12392 | 22.29 | 2.341e-06 | 2.625 |
chr2:48633406 | rs75792391 | - | C>A | 33 | 20624 | 22.25 | 2.391e-06 | 2.27 |
chr4:33767083 | rs73222427 | - | G>A | 22 | 11576 | 22.24 | 2.406e-06 | 2.673 |
chr2:235989360 | rs77888970 | - | G>A | 22 | 11362 | 22.15 | 2.521e-06 | 2.671 |
chr8:35831522 | rs118039006 | - | T>C | 22 | 12056 | 20.54 | 5.843e-06 | 2.58 |
chr10:3381474 | rs10751920 | - | T>C | 58 | 45891 | 20.04 | 7.569e-06 | 1.834 |
chr6:502106 | rs75891606 | EXOC2 | A>G | 59 | 46638 | 19.88 | 8.229e-06 | 1.822 |
chr1:20972111 | rs3738136 | PINK1 | G>A | 53 | 41156 | 19.67 | 9.187e-06 | 1.869 |
chr4:188929600 | rs6812408 | - | A>G | 125 | 119212 | 19.63 | 9.394e-06 | 1.547 |
chr9:127676918 | rs74759033 | GOLGA1 | G>A | 46 | 33875 | 19.52 | 9.966e-06 | 1.941 |
chr15:49480222 | rs111395635 | GALK2 | A>C | 33 | 21669 | 19.46 | 1.028e-05 | 2.158 |
chr11:55540964 | rs117263837 | OR5D13 | G>T | 19 | 9999 | 19.25 | 1.146e-05 | 2.67 |
chr12:92071674 | rs118134441 | - | T>C | 22 | 12354 | 19.19 | 1.185e-05 | 2.504 |
chr3:52414112 | rs73072968 | DNAH1 | C>T | 32 | 20917 | 19.09 | 1.248e-05 | 2.166 |
chr11:48099242 | rs72901575 | PTPRJ | G>A | 30 | 19242 | 19.0 | 1.308e-05 | 2.212 |
chr2:83936401 | rs114861441 | - | C>T | 19 | 10055 | 18.99 | 1.315e-05 | 2.654 |
chr2:48076548 | rs75315139 | FBXO11 | A>G | 33 | 21958 | 18.86 | 1.406e-05 | 2.134 |
ID | Name | Top Correlation |
---|---|---|
HP: 0031549 | Lymphocytoma cutis | 1/20 |
HP: 0500028 | Cotton wool plaques | 1/20 |