A49.8

Female Case	Female Control	% Female
136	249727	41%

Male Case	Male Control	% Male
197	210145	59%

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds ratio
chr7:101058044	rs75591773	COL26A1	G>C	20	9718	37.27	1.027e-09	3.73
chr9:16591600	rs78726924	BNC2	T>C	16	7374	32.56	1.157e-08	3.895
chr6:147848218	rs6901081	SAMD5	T>C	29	18840	31.1	2.453e-08	2.833
chr8:138800245	rs7829284	-	T>C	16	7603	30.97	2.618e-08	3.782
chr11:128574857	rs75275551	FLI1	G>T	17	8520	29.77	4.855e-08	3.579
chr20:5223865	rs78863898	-	G>A	13	5648	29.23	6.444e-08	4.11
chr5:78202968	rs11747224	ARSB	C>T	53	46164	28.1	1.152e-07	2.19
chr15:76100087	rs28550161	-	A>G	18	9687	27.83	1.322e-07	3.347
chr10:34370846	rs7067685	-	G>A	20	11430	27.63	1.465e-07	3.165
chr15:76092990	rs28571916	-	G>A	18	9846	27.44	1.623e-07	3.323
chr4:13166700	rs6840651	-	G>A	13	5931	27.2	1.831e-07	3.937
chr10:34398520	rs12415499	PARD3	T>C	20	11670	26.52	2.612e-07	3.098
chr7:20030579	rs73686306	-	C>T	24	15322	26.48	2.66e-07	2.848
chr3:25930262	rs17017168	-	T>C	15	7522	26.35	2.854e-07	3.57
chr18:55549937	rs562128	-	C>T	12	5343	26.15	3.155e-07	4.026
chr8:98000151	rs2853272	CPQ	C>G	22	13579	26.05	3.323e-07	2.938
chr9:20633326	rs116872864	-	A>G	27	18413	25.74	3.91e-07	2.673
chr8:136475038	rs12679393	KHDRBS3	G>A	37	29483	24.64	6.925e-07	2.329
chr22:44869030	rs8136951	-	A>G	17	9496	24.4	7.841e-07	3.211
chr6:114589598	rs72956210	HS3ST5	C>A	41	34064	24.34	8.054e-07	2.24
chr7:101058044	rs75591773	COL26A1	G>C	20	9380	43.97	3.327e-11	4.136
chr15:76092990	rs28571916	-	G>A	17	8715	32.22	1.378e-08	3.761
chr7:101229810	rs113253169	-	C>T	22	13836	28.63	8.76e-08	3.096
chr15:45694768	rs1834686	SPATA5L1	G>T	2	231	27.68	1.431e-07	16.0
chr9:20633326	rs116872864	-	A>G	26	18132	27.02	2.015e-07	2.793
chr10:109558009	rs117843857	-	G>T	18	10545	26.6	2.507e-07	3.28
chr15:76100087	rs28550161	-	A>G	16	8799	26.57	2.535e-07	3.481
chr6:147848218	rs6901081	SAMD5	T>C	22	14583	25.54	4.338e-07	2.923
chr2:227215854	rs6737349	-	A>G	73	78841	25.35	4.786e-07	1.968
chr3:25930262	rs17017168	-	T>C	12	5744	25.34	4.804e-07	3.961
chr3:151324077	rs114340614	-	T>G	12	5824	24.79	6.389e-07	3.91
chr10:122983096	rs76105384	-	A>G	12	5854	24.74	6.56e-07	3.906
chr3:25895944	rs11917528	-	T>C	12	5862	24.46	7.6e-07	3.879
chr23:88726977	rs181310186	-	C>T	25	17940	24.43	7.695e-07	2.708
chr4:40972701	rs62410358	APBB2	C>T	33	26845	24.36	8.007e-07	2.429
chr11:128574857	rs75275551	FLI1	G>T	15	8321	24.34	8.08e-07	3.429
chr16:22874327	rs10444989	HS3ST2	C>T	19	12029	24.13	8.995e-07	3.039
chr20:60728767	rs2427267	SS18L1	C>T	83	93892	24.1	9.152e-07	1.889
chr20:59962872	rs78533789	CDH4	G>A	13	6772	23.98	9.738e-07	3.67
chr3:112168112	rs6783803	-	T>C	16	9544	23.97	9.793e-07	3.297
chr7:101058044	rs75591773	COL26A1	G>C	20	9380	43.97	3.327e-11	4.136
chr15:76092990	rs28571916	-	G>A	17	8715	32.22	1.378e-08	3.761
chr7:101229810	rs113253169	-	C>T	22	13836	28.63	8.76e-08	3.096
chr15:45694768	rs1834686	SPATA5L1	G>T	2	231	27.68	1.431e-07	16.0
chr9:20633326	rs116872864	-	A>G	26	18132	27.02	2.015e-07	2.793
chr10:109558009	rs117843857	-	G>T	18	10545	26.6	2.507e-07	3.28
chr15:76100087	rs28550161	-	A>G	16	8799	26.57	2.535e-07	3.481
chr6:147848218	rs6901081	SAMD5	T>C	22	14583	25.54	4.338e-07	2.923
chr2:227215854	rs6737349	-	A>G	73	78841	25.35	4.786e-07	1.968
chr3:25930262	rs17017168	-	T>C	12	5744	25.34	4.804e-07	3.961
chr3:151324077	rs114340614	-	T>G	12	5824	24.79	6.389e-07	3.91
chr10:122983096	rs76105384	-	A>G	12	5854	24.74	6.56e-07	3.906
chr3:25895944	rs11917528	-	T>C	12	5862	24.46	7.6e-07	3.879
chr23:88726977	rs181310186	-	C>T	25	17940	24.43	7.695e-07	2.708
chr4:40972701	rs62410358	APBB2	C>T	33	26845	24.36	8.007e-07	2.429
chr11:128574857	rs75275551	FLI1	G>T	15	8321	24.34	8.08e-07	3.429
chr16:22874327	rs10444989	HS3ST2	C>T	19	12029	24.13	8.995e-07	3.039
chr20:60728767	rs2427267	SS18L1	C>T	83	93892	24.1	9.152e-07	1.889
chr20:59962872	rs78533789	CDH4	G>A	13	6772	23.98	9.738e-07	3.67
chr3:112168112	rs6783803	-	T>C	16	9544	23.97	9.793e-07	3.297

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds ratio
chr21:28703302	rs57884426	-	T>C	19	6325	28.35	1.01e-07	3.26
chr9:7044534	rs117538240	KDM4C	T>C	17	5453	27.2	1.83e-07	3.376
chr10:3381474	rs10751920	-	T>C	47	24533	25.57	4.264e-07	2.148
chr18:77755460	rs57083541	TXNL4A	T>C	23	9085	24.36	8.011e-07	2.76
chr8:134860198	rs11784390	-	T>C	25	10334	24.14	8.961e-07	2.652
chr18:53787379	rs11664983	-	C>A	61	35076	24.04	9.418e-07	1.95
chr16:77627354	rs28459028	-	G>A	42	21664	23.36	1.343e-06	2.155
chr8:129567077	rs74480402	-	T>C	31	14407	22.64	1.958e-06	2.367
chr8:81011534	rs117698623	TPD52	C>T	23	9446	22.49	2.108e-06	2.661
chr3:170130825	rs75727031	-	G>C	15	5022	22.03	2.685e-06	3.216
chr22:48645780	rs5768480	-	A>G	31	14894	21.14	4.273e-06	2.304
chr17:2629084	rs7221868	-	G>A	26	11547	21.05	4.471e-06	2.458
chr15:48990038	rs80107113	-	C>T	25	10923	20.94	4.742e-06	2.491
chr14:86866959	rs72696762	-	T>C	18	6603	20.83	5.012e-06	2.864
chr10:29202418	rs117280645	-	C>A	19	7415	20.76	5.207e-06	2.789
chr16:65662082	rs4420528	-	C>T	22	9230	20.69	5.398e-06	2.612
chr12:121996910	rs79020059	KDM2B	T>C	21	8569	20.65	5.507e-06	2.661
chr15:22980776	rs62008564	CYFIP1	C>T	19	7420	20.56	5.788e-06	2.775
chr10:1259379	rs12415209	ADARB2	C>T	90	61211	20.49	6.008e-06	1.702
chr11:57333893	rs61887019	UBE2L6	A>G	77	49873	20.15	7.149e-06	1.748
chr10:3381474	rs10751920	-	T>C	44	21036	31.53	1.963e-08	2.391
chr9:7044534	rs117538240	KDM4C	T>C	17	5389	28.5	9.383e-08	3.469
chr21:28703302	rs57884426	-	T>C	14	4143	26.46	2.694e-07	3.695
chr8:81011534	rs117698623	TPD52	C>T	23	9196	24.61	7.007e-07	2.78
chr23:151996723	rs142811420	CETN2	T>C	12	3430	24.26	8.428e-07	3.904
chr3:170130825	rs75727031	-	G>C	15	4907	23.61	1.177e-06	3.342
chr18:77755460	rs57083541	TXNL4A	T>C	19	7161	22.79	1.803e-06	2.921
chr16:55223305	rs41305757	-	C>T	33	16000	22.69	1.907e-06	2.321
chr18:53787379	rs11664983	-	C>A	58	33953	22.66	1.934e-06	1.947
chr10:52874761	rs9414820	PRKG1	C>A	88	58997	22.14	2.535e-06	1.754
chr15:47839394	rs72733866	SEMA6D	G>A	45	24691	21.7	3.191e-06	2.06
chr10:91250370	rs80219855	SLC16A12	G>A	20	8041	20.93	4.766e-06	2.74
chr8:129567077	rs74480402	-	T>C	29	13744	20.84	4.999e-06	2.352
chr3:52819883	rs2535630	ITIH1	G>T	20	8063	20.79	5.117e-06	2.732
chr6:120568673	rs9398553	-	G>T	28	13162	20.45	6.131e-06	2.365
chr16:61725271	rs117135564	CDH8	T>C	14	4810	20.26	6.765e-06	3.192
chr10:100076444	rs71486156	-	T>C	73	46679	20.21	6.954e-06	1.781
chr22:48645780	rs5768480	-	A>G	27	12674	20.19	7.003e-06	2.386
chr6:124947642	rs11758000	NKAIN2	G>A	19	7662	20.14	7.182e-06	2.754
chr15:48990038	rs80107113	-	C>T	22	9382	20.09	7.403e-06	2.582
chr10:3381474	rs10751920	-	T>C	44	21036	31.53	1.963e-08	2.391
chr9:7044534	rs117538240	KDM4C	T>C	17	5389	28.5	9.383e-08	3.469
chr21:28703302	rs57884426	-	T>C	14	4143	26.46	2.694e-07	3.695
chr8:81011534	rs117698623	TPD52	C>T	23	9196	24.61	7.007e-07	2.78
chr23:151996723	rs142811420	CETN2	T>C	12	3430	24.26	8.428e-07	3.904
chr3:170130825	rs75727031	-	G>C	15	4907	23.61	1.177e-06	3.342
chr18:77755460	rs57083541	TXNL4A	T>C	19	7161	22.79	1.803e-06	2.921
chr16:55223305	rs41305757	-	C>T	33	16000	22.69	1.907e-06	2.321
chr18:53787379	rs11664983	-	C>A	58	33953	22.66	1.934e-06	1.947
chr10:52874761	rs9414820	PRKG1	C>A	88	58997	22.14	2.535e-06	1.754
chr15:47839394	rs72733866	SEMA6D	G>A	45	24691	21.7	3.191e-06	2.06
chr10:91250370	rs80219855	SLC16A12	G>A	20	8041	20.93	4.766e-06	2.74
chr8:129567077	rs74480402	-	T>C	29	13744	20.84	4.999e-06	2.352
chr3:52819883	rs2535630	ITIH1	G>T	20	8063	20.79	5.117e-06	2.732
chr6:120568673	rs9398553	-	G>T	28	13162	20.45	6.131e-06	2.365
chr16:61725271	rs117135564	CDH8	T>C	14	4810	20.26	6.765e-06	3.192
chr10:100076444	rs71486156	-	T>C	73	46679	20.21	6.954e-06	1.781
chr22:48645780	rs5768480	-	A>G	27	12674	20.19	7.003e-06	2.386
chr6:124947642	rs11758000	NKAIN2	G>A	19	7662	20.14	7.182e-06	2.754
chr15:48990038	rs80107113	-	C>T	22	9382	20.09	7.403e-06	2.582

Location

SNP

Gene

Ref>Alt

Alt in Case

Alt in Control

Chi-square

P-value

Odds ratio

chr21:28703302

rs57884426

-

T>C

19

6325

28.35

1.01e-07

3.26

chr9:7044534

rs117538240

KDM4C

T>C

17

5453

27.2

1.83e-07

3.376

chr10:3381474

rs10751920

-

T>C

47

24533

25.57

4.264e-07

2.148

chr18:77755460

rs57083541

TXNL4A

T>C

23

9085

24.36

8.011e-07

2.76

chr8:134860198

rs11784390

-

T>C

25

10334

24.14

8.961e-07

2.652

chr18:53787379

rs11664983

-

C>A

61

35076

24.04

9.418e-07

1.95

chr16:77627354

rs28459028

-

G>A

42

21664

23.36

1.343e-06

2.155

chr8:129567077

rs74480402

-

T>C

31

14407

22.64

1.958e-06

2.367

chr8:81011534

rs117698623

TPD52

C>T

23

9446

22.49

2.108e-06

2.661

chr3:170130825

rs75727031

-

G>C

15

5022

22.03

2.685e-06

3.216

chr22:48645780

rs5768480

-

A>G

31

14894

21.14

4.273e-06

2.304

chr17:2629084

rs7221868

-

G>A

26

11547

21.05

4.471e-06

2.458

chr15:48990038

rs80107113

-

C>T

25

10923

20.94

4.742e-06

2.491

chr14:86866959

rs72696762

-

T>C

18

6603

20.83

5.012e-06

2.864

chr10:29202418

rs117280645

-

C>A

19

7415

20.76

5.207e-06

2.789

chr16:65662082

rs4420528

-

C>T

22

9230

20.69

5.398e-06

2.612

chr12:121996910

rs79020059

KDM2B

T>C

21

8569

20.65

5.507e-06

2.661

chr15:22980776

rs62008564

CYFIP1

C>T

19

7420

20.56

5.788e-06

2.775

chr10:1259379

rs12415209

ADARB2

C>T

90

61211

20.49

6.008e-06

1.702

chr11:57333893

rs61887019

UBE2L6

A>G

77

49873

20.15

7.149e-06

1.748

chr10:3381474

rs10751920

-

T>C

44

21036

31.53

1.963e-08

2.391

chr9:7044534

rs117538240

KDM4C

T>C

17

5389

28.5

9.383e-08

3.469

chr21:28703302

rs57884426

-

T>C

14

4143

26.46

2.694e-07

3.695

chr8:81011534

rs117698623

TPD52

C>T

23

9196

24.61

7.007e-07

2.78

chr23:151996723

rs142811420

CETN2

T>C

12

3430

24.26

8.428e-07

3.904

chr3:170130825

rs75727031

-

G>C

15

4907

23.61

1.177e-06

3.342

chr18:77755460

rs57083541

TXNL4A

T>C

19

7161

22.79

1.803e-06

2.921

chr16:55223305

rs41305757

-

C>T

33

16000

22.69

1.907e-06

2.321

chr18:53787379

rs11664983

-

C>A

58

33953

22.66

1.934e-06

1.947

chr10:52874761

rs9414820

PRKG1

C>A

88

58997

22.14

2.535e-06

1.754

chr15:47839394

rs72733866

SEMA6D

G>A

45

24691

21.7

3.191e-06

2.06

chr10:91250370

rs80219855

SLC16A12

G>A

20

8041

20.93

4.766e-06

2.74

chr8:129567077

rs74480402

-

T>C

29

13744

20.84

4.999e-06

2.352

chr3:52819883

rs2535630

ITIH1

G>T

20

8063

20.79

5.117e-06

2.732

chr6:120568673

rs9398553

-

G>T

28

13162

20.45

6.131e-06

2.365

chr16:61725271

rs117135564

CDH8

T>C

14

4810

20.26

6.765e-06

3.192

chr10:100076444

rs71486156

-

T>C

73

46679

20.21

6.954e-06

1.781

chr22:48645780

rs5768480

-

A>G

27

12674

20.19

7.003e-06

2.386

chr6:124947642

rs11758000

NKAIN2

G>A

19

7662

20.14

7.182e-06

2.754

chr15:48990038

rs80107113

-

C>T

22

9382

20.09

7.403e-06

2.582

chr10:3381474

rs10751920

-

T>C

44

21036

31.53

1.963e-08

2.391

chr9:7044534

rs117538240

KDM4C

T>C

17

5389

28.5

9.383e-08

3.469

chr21:28703302

rs57884426

-

T>C

14

4143

26.46

2.694e-07

3.695

chr8:81011534

rs117698623

TPD52

C>T

23

9196

24.61

7.007e-07

2.78

chr23:151996723

rs142811420

CETN2

T>C

12

3430

24.26

8.428e-07

3.904

chr3:170130825

rs75727031

-

G>C

15

4907

23.61

1.177e-06

3.342

chr18:77755460

rs57083541

TXNL4A

T>C

19

7161

22.79

1.803e-06

2.921

chr16:55223305

rs41305757

-

C>T

33

16000

22.69

1.907e-06

2.321

chr18:53787379

rs11664983

-

C>A

58

33953

22.66

1.934e-06

1.947

chr10:52874761

rs9414820

PRKG1

C>A

88

58997

22.14

2.535e-06

1.754

chr15:47839394

rs72733866

SEMA6D

G>A

45

24691

21.7

3.191e-06

2.06

chr10:91250370

rs80219855

SLC16A12

G>A

20

8041

20.93

4.766e-06

2.74

chr8:129567077

rs74480402

-

T>C

29

13744

20.84

4.999e-06

2.352

chr3:52819883

rs2535630

ITIH1

G>T

20

8063

20.79

5.117e-06

2.732

chr6:120568673

rs9398553

-

G>T

28

13162

20.45

6.131e-06

2.365

chr16:61725271

rs117135564

CDH8

T>C

14

4810

20.26

6.765e-06

3.192

chr10:100076444

rs71486156

-

T>C

73

46679

20.21

6.954e-06

1.781

chr22:48645780

rs5768480

-

A>G

27

12674

20.19

7.003e-06

2.386

chr6:124947642

rs11758000

NKAIN2

G>A

19

7662

20.14

7.182e-06

2.754

chr15:48990038

rs80107113

-

C>T

22

9382

20.09

7.403e-06

2.582

ID	Name	Top Correlation
HP: 0031549	Lymphocytoma cutis	1/20
HP: 0500028	Cotton wool plaques	1/20

ID	Name	Top Correlation
HP: 0000118	Phenotypic abnormality	0/20
HP: 0000152	Abnormality of head or neck	0/20
HP: 0000234	Abnormality of the head	0/20
HP: 0000245	Abnormality of the paranasal sinuses	0/20
HP: 0000246	Sinusitis	0/20
HP: 0000255	Acute sinusitis	0/20
HP: 0000271	Abnormality of the face	0/20
HP: 0000315	Abnormality of the orbital region	0/20
HP: 0000502	Abnormal conjunctiva morphology	0/20
HP: 0000707	Abnormality of the nervous system	0/20
HP: 0000924	Abnormality of the skeletal system	0/20
HP: 0000929	Abnormal skull morphology	0/20
HP: 0000951	Abnormality of the skin	0/20
HP: 0001055	Erysipelas	0/20
HP: 0001574	Abnormality of the integument	0/20
HP: 0002011	Morphological central nervous system abnormality	0/20
HP: 0002086	Abnormality of the respiratory system	0/20
HP: 0002664	Neoplasm	0/20
HP: 0002715	Abnormality of the immune system	0/20
HP: 0002718	Recurrent bacterial infections	0/20
HP: 0002719	Recurrent infections	0/20
HP: 0002740	Recurrent E. coli infections	0/20
HP: 0002795	Functional respiratory abnormality	0/20
HP: 0005420	Recurrent gram-negative bacterial infections	0/20
HP: 0007367	Atrophy/Degeneration affecting the central nervous system	0/20
HP: 0008069	Neoplasm of the skin	0/20
HP: 0009121	Abnormal axial skeleton morphology	0/20
HP: 0010978	Abnormality of immune system physiology	0/20
HP: 0011121	Abnormality of skin morphology	0/20
HP: 0011122	Abnormality of skin physiology	0/20
HP: 0011123	Inflammatory abnormality of the skin	0/20
HP: 0011355	Localized skin lesion	0/20
HP: 0011793	Neoplasm by anatomical site	0/20
HP: 0011821	Abnormality of facial skeleton	0/20
HP: 0011842	Abnormality of skeletal morphology	0/20
HP: 0012322	Perifolliculitis	0/20
HP: 0012639	Abnormal nervous system morphology	0/20
HP: 0012647	Abnormal inflammatory response	0/20
HP: 0012649	Increased inflammatory response	0/20
HP: 0030350	Erythematous papule	0/20
HP: 0030669	Abnormal ocular adnexa morphology	0/20
HP: 0030829	Abnormal breath sound	0/20
HP: 0030831	Rhonchi	0/20
HP: 0030947	Conjunctival follicles	0/20
HP: 0032039	Abnormality of the ocular adnexa	0/20
HP: 0032101	Unusual infection	0/20
HP: 0100256	Senile plaques	0/20
HP: 0200034	Papule	0/20

Other bacterial infections of unspecified site

A49.8

Female ^ⓘ

Male ^ⓘ

Links

Statistics

Top SNP Information

Associated Phenotypes ^ⓘ

Other bacterial infections of unspecified site

A49.8

Female ⓘ

Male ⓘ

Links

Statistics

Top SNP Information Show Female Show Male

Associated Phenotypes ⓘ Shared SNP phenotype No shared SNP phenotype

Female ^ⓘ

Male ^ⓘ

Top SNP Information

Associated Phenotypes ^ⓘ