Proteus (mirabilis)(morganii) as the cause of diseases classified to other chapters
B96.4
Case/Control GWAS ⓘ
Statistics
| Case | Control |
|---|---|
| 401 | 459804 |
Top SNP Information
| Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds Ratio |
|---|---|---|---|---|---|---|---|---|
| chr2:165991766 | rs1439806 | SCN3A | G>A | 235 | 203534 | 24.49 | 7.465e-07 | 1.459 |
| chr10:31949770 | rs75377982 | - | C>T | 33 | 17028 | 22.97 | 1.642e-06 | 2.289 |
| chr16:15785049 | rs113493697 | NDE1 | C>T | 24 | 10928 | 22.52 | 2.082e-06 | 2.58 |
| chr7:10468009 | rs17163008 | - | G>A | 66 | 43708 | 22.22 | 2.425e-06 | 1.815 |
| chr13:29152626 | rs78912669 | - | C>T | 36 | 19559 | 22.02 | 2.693e-06 | 2.182 |
| chr12:30991445 | rs33172 | - | C>T | 110 | 83755 | 21.76 | 3.088e-06 | 1.605 |
| chr14:59071998 | rs56220847 | - | G>A | 56 | 35634 | 21.53 | 3.481e-06 | 1.881 |
| chr3:187054392 | rs7652396 | - | A>G | 34 | 18321 | 21.46 | 3.618e-06 | 2.206 |
| chr14:63734100 | rs117173212 | RHOJ | G>A | 14 | 50618 | 21.21 | 4.116e-06 | 0.3094 |
| chr2:128878066 | rs80160667 | UGGT1 | T>C | 36 | 20009 | 20.94 | 4.751e-06 | 2.142 |
| chr8:95793515 | rs4398879 | DPY19L4 | A>G | 180 | 153556 | 20.53 | 5.872e-06 | 1.461 |
| chr5:118629279 | rs2112323 | TNFAIP8 | C>T | 54 | 110703 | 20.49 | 6.002e-06 | 0.5344 |
| chr4:178217424 | rs17064575 | - | C>T | 364 | 348095 | 20.3 | 6.631e-06 | 1.367 |
| chr8:95790085 | rs11996148 | DPY19L4 | T>C | 171 | 144270 | 20.28 | 6.681e-06 | 1.468 |
| chr16:15882857 | rs72772064 | MYH11 | G>A | 155 | 127912 | 20.27 | 6.714e-06 | 1.489 |
| chr4:178210348 | rs79601206 | - | C>T | 143 | 117286 | 20.17 | 7.088e-06 | 1.507 |
| chr17:55319041 | rs34719144 | - | G>T | 101 | 75958 | 20.15 | 7.173e-06 | 1.603 |
| chr16:16181778 | rs116941979 | ABCC1 | A>G | 37 | 20930 | 19.96 | 7.897e-06 | 2.086 |
| chr20:61556270 | rs74532336 | DIDO1 | G>A | 47 | 28894 | 19.9 | 8.159e-06 | 1.931 |
| chr5:118617930 | rs10053596 | TNFAIP8 | A>G | 78 | 142896 | 19.86 | 8.322e-06 | 0.5922 |
| chr13:29152626 | rs78912669 | - | C>T | 36 | 17799 | 27.62 | 1.478e-07 | 2.386 |
| chr2:165991766 | rs1439806 | SCN3A | G>A | 217 | 183902 | 24.55 | 7.241e-07 | 1.479 |
| chr12:30991445 | rs33172 | - | C>T | 103 | 74418 | 24.32 | 8.143e-07 | 1.674 |
| chr16:15785049 | rs113493697 | NDE1 | C>T | 24 | 10768 | 22.88 | 1.728e-06 | 2.6 |
| chr4:178210348 | rs79601206 | - | C>T | 138 | 109300 | 22.61 | 1.986e-06 | 1.556 |
| chr14:59071998 | rs56220847 | - | G>A | 56 | 34980 | 22.36 | 2.265e-06 | 1.905 |
| chr2:128878066 | rs80160667 | UGGT1 | T>C | 36 | 19665 | 21.54 | 3.472e-06 | 2.166 |
| chr6:3913630 | rs4074617 | - | C>T | 455 | 445141 | 21.29 | 3.94e-06 | 1.388 |
| chr5:118629279 | rs2112323 | TNFAIP8 | C>T | 49 | 103631 | 21.28 | 3.967e-06 | 0.5128 |
| chr4:178217424 | rs17064575 | - | C>T | 339 | 317655 | 21.08 | 4.394e-06 | 1.387 |
| chr21:39815851 | rs9636934 | ERG | C>T | 29 | 14713 | 20.64 | 5.543e-06 | 2.306 |
| chr15:72056680 | rs16956179 | THSD4 | G>A | 37 | 20692 | 20.59 | 5.684e-06 | 2.111 |
| chr2:80653423 | Affx-20560232 | CTNNA2 | G>T | 117 | 90359 | 20.54 | 5.831e-06 | 1.569 |
| chr17:71013399 | rs76383776 | SLC39A11 | T>G | 28 | 14057 | 20.5 | 5.963e-06 | 2.331 |
| chr14:63734100 | rs117173212 | RHOJ | G>A | 14 | 49248 | 20.45 | 6.133e-06 | 0.3153 |
| chr23:80532783 | rs73231024 | SH3BGRL | C>T | 32 | 17539 | 20.42 | 6.214e-06 | 2.226 |
| chr5:118617930 | rs10053596 | TNFAIP8 | A>G | 69 | 129581 | 20.09 | 7.402e-06 | 0.5728 |
| chr16:15882857 | rs72772064 | MYH11 | G>A | 143 | 116044 | 19.59 | 9.615e-06 | 1.501 |
| chr10:116384509 | rs80283431 | ABLIM1 | A>G | 22 | 10159 | 19.53 | 9.927e-06 | 2.517 |
| chr3:187062359 | rs58233331 | - | A>G | 20 | 8932 | 19.3 | 1.119e-05 | 2.608 |
Associated Phenotypes ⓘ
| ID | Name | Top Correlation |
|---|---|---|
| HP: 0005420 | Recurrent gram-negative bacterial infections | 1/20 |