C21.0

Case	Control
140	460065

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds Ratio
chr6:32434349	rs9268969	-	C>T	162	342674	52.99	3.357e-13	2.3
chr6:32433167	rs2395185	-	G>T	160	338058	52.38	4.573e-13	2.295
chr6:32492866	rs111834747	HLA-DRB5	C>T	158	327059	51.8	6.138e-13	2.275
chr6:32626249	rs6928482	-	T>C	196	450273	51.64	6.666e-13	2.382
chr6:32546696	rs3208409	HLA-DRB1	G>A	158	332874	51.52	7.093e-13	2.27
chr6:32560934	rs28366302	-	G>C	158	333843	51.26	8.109e-13	2.266
chr6:32432835	rs9268923	-	C>T	161	342181	51.25	8.139e-13	2.269
chr6:32546879	Affx-28486470	HLA-DRB1	A>G	158	333311	51.0	9.232e-13	2.261
chr6:32429643	rs9268853	-	T>C	160	341095	50.43	1.238e-12	2.261
chr6:32546912	rs34252386	HLA-DRB1	A>AG	152	316240	49.31	2.189e-12	2.269
chr6:32546557	rs34839759	HLA-DRB1	C>G	155	331441	47.8	4.721e-12	2.21
chr6:32550550	rs28724008	HLA-DRB1	C>G	158	341310	46.89	7.508e-12	2.19
chr6:32428115	rs9268835	-	G>A	145	305576	46.71	8.227e-12	2.187
chr6:32657543	rs4642516	-	G>T	195	467648	45.0	1.969e-11	2.275
chr6:32637016	rs9274697	-	A>G	196	466663	44.51	2.526e-11	2.258
chr6:32428062	rs9268833	-	C>T	143	305661	43.33	4.632e-11	2.128
chr6:32376176	rs3763311	-	C>T	142	302812	42.05	8.916e-11	2.101
chr6:32341473	rs9268403	-	T>C	136	286849	40.74	1.742e-10	2.08
chr6:32376746	rs3763316	-	C>T	136	288468	40.48	1.988e-10	2.076
chr6:32364356	rs9268481	BTNL2	A>G	136	288096	40.37	2.104e-10	2.074
chr6:32626249	rs6928482	-	T>C	191	425776	54.03	1.977e-13	2.488
chr6:32434349	rs9268969	-	C>T	158	327927	52.51	4.276e-13	2.335
chr6:32433167	rs2395185	-	G>T	156	323523	51.87	5.929e-13	2.328
chr6:32432835	rs9268923	-	C>T	157	327452	50.75	1.048e-12	2.302
chr6:32492866	rs111834747	HLA-DRB5	C>T	154	314041	50.49	1.198e-12	2.293
chr6:32546696	rs3208409	HLA-DRB1	G>A	154	319603	50.2	1.388e-12	2.288
chr6:32429643	rs9268853	-	T>C	156	326412	49.98	1.557e-12	2.294
chr6:32560934	rs28366302	-	G>C	154	320550	49.95	1.58e-12	2.283
chr6:32546879	Affx-28486470	HLA-DRB1	A>G	154	320320	49.62	1.866e-12	2.277
chr6:32657543	rs4642516	-	G>T	189	437023	48.45	3.385e-12	2.396
chr6:32546912	rs34252386	HLA-DRB1	A>AG	148	303872	48.18	3.894e-12	2.291
chr6:32637016	rs9274697	-	A>G	190	437340	47.39	5.81e-12	2.365
chr6:32550550	rs28724008	HLA-DRB1	C>G	154	326153	46.6	8.699e-12	2.223
chr6:32546557	rs34839759	HLA-DRB1	C>G	151	318248	46.51	9.123e-12	2.225
chr6:32428115	rs9268835	-	G>A	141	291900	45.88	1.257e-11	2.208
chr6:32428062	rs9268833	-	C>T	139	291983	42.46	7.218e-11	2.145
chr6:32376176	rs3763311	-	C>T	136	285475	40.01	2.528e-10	2.095
chr6:32341473	rs9268403	-	T>C	132	275524	38.7	4.931e-10	2.072
chr6:32376746	rs3763316	-	C>T	132	276879	38.51	5.434e-10	2.069
chr6:32357165	rs9268474	-	T>C	132	277009	38.35	5.922e-10	2.066

Location

SNP

Gene

Ref>Alt

Alt in Case

Alt in Control

Chi-square

P-value

Odds Ratio

chr6:32434349

rs9268969

-

C>T

162

342674

52.99

3.357e-13

2.3

chr6:32433167

rs2395185

-

G>T

160

338058

52.38

4.573e-13

2.295

chr6:32492866

rs111834747

HLA-DRB5

C>T

158

327059

51.8

6.138e-13

2.275

chr6:32626249

rs6928482

-

T>C

196

450273

51.64

6.666e-13

2.382

chr6:32546696

rs3208409

HLA-DRB1

G>A

158

332874

51.52

7.093e-13

2.27

chr6:32560934

rs28366302

-

G>C

158

333843

51.26

8.109e-13

2.266

chr6:32432835

rs9268923

-

C>T

161

342181

51.25

8.139e-13

2.269

chr6:32546879

Affx-28486470

HLA-DRB1

A>G

158

333311

51.0

9.232e-13

2.261

chr6:32429643

rs9268853

-

T>C

160

341095

50.43

1.238e-12

2.261

chr6:32546912

rs34252386

HLA-DRB1

A>AG

152

316240

49.31

2.189e-12

2.269

chr6:32546557

rs34839759

HLA-DRB1

C>G

155

331441

47.8

4.721e-12

2.21

chr6:32550550

rs28724008

HLA-DRB1

C>G

158

341310

46.89

7.508e-12

2.19

chr6:32428115

rs9268835

-

G>A

145

305576

46.71

8.227e-12

2.187

chr6:32657543

rs4642516

-

G>T

195

467648

45.0

1.969e-11

2.275

chr6:32637016

rs9274697

-

A>G

196

466663

44.51

2.526e-11

2.258

chr6:32428062

rs9268833

-

C>T

143

305661

43.33

4.632e-11

2.128

chr6:32376176

rs3763311

-

C>T

142

302812

42.05

8.916e-11

2.101

chr6:32341473

rs9268403

-

T>C

136

286849

40.74

1.742e-10

2.08

chr6:32376746

rs3763316

-

C>T

136

288468

40.48

1.988e-10

2.076

chr6:32364356

rs9268481

BTNL2

A>G

136

288096

40.37

2.104e-10

2.074

chr6:32626249

rs6928482

-

T>C

191

425776

54.03

1.977e-13

2.488

chr6:32434349

rs9268969

-

C>T

158

327927

52.51

4.276e-13

2.335

chr6:32433167

rs2395185

-

G>T

156

323523

51.87

5.929e-13

2.328

chr6:32432835

rs9268923

-

C>T

157

327452

50.75

1.048e-12

2.302

chr6:32492866

rs111834747

HLA-DRB5

C>T

154

314041

50.49

1.198e-12

2.293

chr6:32546696

rs3208409

HLA-DRB1

G>A

154

319603

50.2

1.388e-12

2.288

chr6:32429643

rs9268853

-

T>C

156

326412

49.98

1.557e-12

2.294

chr6:32560934

rs28366302

-

G>C

154

320550

49.95

1.58e-12

2.283

chr6:32546879

Affx-28486470

HLA-DRB1

A>G

154

320320

49.62

1.866e-12

2.277

chr6:32657543

rs4642516

-

G>T

189

437023

48.45

3.385e-12

2.396

chr6:32546912

rs34252386

HLA-DRB1

A>AG

148

303872

48.18

3.894e-12

2.291

chr6:32637016

rs9274697

-

A>G

190

437340

47.39

5.81e-12

2.365

chr6:32550550

rs28724008

HLA-DRB1

C>G

154

326153

46.6

8.699e-12

2.223

chr6:32546557

rs34839759

HLA-DRB1

C>G

151

318248

46.51

9.123e-12

2.225

chr6:32428115

rs9268835

-

G>A

141

291900

45.88

1.257e-11

2.208

chr6:32428062

rs9268833

-

C>T

139

291983

42.46

7.218e-11

2.145

chr6:32376176

rs3763311

-

C>T

136

285475

40.01

2.528e-10

2.095

chr6:32341473

rs9268403

-

T>C

132

275524

38.7

4.931e-10

2.072

chr6:32376746

rs3763316

-

C>T

132

276879

38.51

5.434e-10

2.069

chr6:32357165

rs9268474

-

T>C

132

277009

38.35

5.922e-10

2.066

ID	Name	Top Correlation
HP: 0001545	Anteriorly placed anus	20/20
HP: 0025407	Rectourethral fistula	12/20
HP: 0031449	Perineal hemangioma	8/20

ID	Name	Top Correlation
HP: 0000032	Abnormality of male external genitalia	0/20
HP: 0000078	Abnormality of the genital system	0/20
HP: 0000079	Abnormality of the urinary system	0/20
HP: 0000118	Phenotypic abnormality	0/20
HP: 0000119	Abnormality of the genitourinary system	0/20
HP: 0000795	Abnormality of the urethra	0/20
HP: 0000811	Abnormal external genitalia	0/20
HP: 0001028	Hemangioma	0/20
HP: 0001626	Abnormality of the cardiovascular system	0/20
HP: 0002012	Abnormality of the abdominal organs	0/20
HP: 0002034	Abnormality of the rectum	0/20
HP: 0002242	Abnormal intestine morphology	0/20
HP: 0002250	Abnormal large intestine morphology	0/20
HP: 0002597	Abnormality of the vasculature	0/20
HP: 0002664	Neoplasm	0/20
HP: 0004378	Abnormality of the anus	0/20
HP: 0004397	Ectopic anus	0/20
HP: 0004792	Rectoperineal fistula	0/20
HP: 0004871	Perineal fistula	0/20
HP: 0010461	Abnormality of the male genitalia	0/20
HP: 0010480	Urethral fistula	0/20
HP: 0010936	Abnormality of the lower urinary tract	0/20
HP: 0011024	Abnormality of the gastrointestinal tract	0/20
HP: 0011793	Neoplasm by anatomical site	0/20
HP: 0012243	Abnormal reproductive system morphology	0/20
HP: 0012718	Morphological abnormality of the gastrointestinal tract	0/20
HP: 0012732	Anorectal anomaly	0/20
HP: 0025025	Rectovestibular fistula	0/20
HP: 0025031	Abnormality of the digestive system	0/20
HP: 0025033	Abnormality of digestive system morphology	0/20
HP: 0100589	Urogenital fistula	0/20
HP: 0100590	Rectal fistula	0/20
HP: 0100742	Vascular neoplasm	0/20
HP: 0100819	Intestinal fistula	0/20

Anus, unspecified

C21.0

Case/Control GWAS ^ⓘ

Links

Statistics

Top SNP Information

Associated Phenotypes ^ⓘ

Anus, unspecified

C21.0

Case/Control GWAS ⓘ

Links

Statistics

Top SNP Information Show Table

Associated Phenotypes ⓘ Shared SNP phenotypes No shared SNP phenotypes

Case/Control GWAS ^ⓘ

Top SNP Information

Associated Phenotypes ^ⓘ