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ICD-10
HPO
Compare GWAS
Super Class
Malignant neoplasm of corpus uteri
Sub Class
Endometrium
C54.1
Case/Control GWAS
ⓘ
Links
Sex Split
Interactive Plot
Statistics
Case
Control
1570
458635
Top SNP Information
Show Table
Location
SNP
Gene
Ref>Alt
Alt in Case
Alt in Control
Chi-square
P-value
Odds Ratio
chr6:21649085
rs1740828
-
G>A
1424
469178
31.74
1.759e-08
0.8199
chr17:2092196
rs117275944
SMG6
A>G
106
18453
30.69
3.022e-08
1.719
chr1:189589339
rs10489759
-
C>T
50
30665
28.75
8.254e-08
0.4737
chr15:51516055
rs2899472
CYP19A1
C>A
942
241138
26.31
2.911e-07
1.219
chr5:107008378
rs13184509
-
A>C
846
215203
24.43
7.71e-07
1.218
chr5:36243504
rs11746720
-
C>T
123
55123
23.05
1.58e-06
0.6452
chr4:180487431
rs2610998
-
G>T
145
62670
22.73
1.863e-06
0.6685
chr1:68821539
rs9436812
-
T>C
1335
355677
22.54
2.055e-06
1.184
chr16:85718918
rs35444818
GINS2
C>A
1060
278496
21.66
3.259e-06
1.19
chr4:114258996
rs10005957
ANK2
C>T
109
49457
21.33
3.87e-06
0.6398
chr3:13612107
rs17038305
FBLN2
C>T
14
13185
21.29
3.944e-06
0.3107
chr5:116386784
rs12657242
-
G>A
281
107327
21.28
3.96e-06
0.7502
chr4:114278277
rs3733617
ANK2
C>T
104
47411
20.89
4.858e-06
0.6363
chr1:207782889
rs17047661
CR1
A>G
17
14302
20.66
5.492e-06
0.3478
chr18:10153660
rs77532641
-
C>T
65
11035
20.64
5.554e-06
1.757
chr3:194962593
rs12496628
XXYLT1
T>C
78
37989
20.6
5.652e-06
0.5975
chr5:685504
rs6862648
TPPP
G>A
182
74173
20.51
5.943e-06
0.7088
chr3:194906925
rs6810043
XXYLT1
C>T
163
67697
20.46
6.102e-06
0.6964
chr15:51558422
rs3889391
CYP19A1
G>A
1511
409342
20.24
6.841e-06
1.171
chr9:12672097
rs1408799
-
C>T
968
320937
20.09
7.379e-06
0.8424
chr25:2692710
rs2259750
-
A>G
448
168156
36.58
1.463e-09
0.7344
chr17:2092196
rs117275944
SMG6
A>G
106
18238
30.77
2.906e-08
1.721
chr6:21649085
rs1740828
-
G>A
1353
437641
25.98
3.456e-07
0.8319
chr5:107008378
rs13184509
-
A>C
828
209324
22.72
1.874e-06
1.214
chr2:218429061
rs61264747
-
C>A
155
31271
22.25
2.392e-06
1.473
chr15:51516055
rs2899472
CYP19A1
C>A
914
234624
21.05
4.476e-06
1.198
chr1:68821539
rs9436812
-
T>C
1281
338070
20.99
4.614e-06
1.181
chr18:10153660
rs77532641
-
C>T
62
10274
20.63
5.56e-06
1.78
chr25:2676059
rs28427303
-
C>T
236
52038
19.75
8.812e-06
1.35
chr1:156848918
rs6336
NTRK1
C>T
255
57150
19.59
9.601e-06
1.335
chr5:142525227
rs17287613
ARHGAP26
G>A
157
32730
19.18
1.19e-05
1.431
chr9:125427807
rs4836906
-
T>C
104
19912
19.13
1.222e-05
1.543
chr5:107053676
rs13179374
-
C>G
885
228015
19.05
1.274e-05
1.189
chr18:65061813
rs11151361
-
A>G
100
19026
19.0
1.307e-05
1.554
chr16:51965266
rs117515411
-
T>G
110
21144
18.82
1.44e-05
1.521
chr25:2645366
rs311083
-
C>G
1036
335532
18.82
1.433e-05
0.8478
chr12:11570428
rs11612920
PRB2
C>T
74
13227
18.53
1.669e-05
1.653
chr1:228492220
rs41270183
OBSCN
C>T
77
13902
18.43
1.763e-05
1.635
chr12:133280973
rs112122282
PXMP2
G>T
101
19375
18.39
1.8e-05
1.54
chr1:156848946
rs6339
NTRK1
G>T
252
56773
18.23
1.956e-05
1.323
Associated Phenotypes
ⓘ
Shared SNP phenotypes
No shared SNP phenotypes
ID
Name
Top Correlation
HP: 0000008
Abnormal morphology of female internal genitalia
1/20
HP: 0000078
Abnormality of the genital system
1/20
HP: 0000080
Abnormality of reproductive system physiology
1/20
HP: 0000130
Abnormality of the uterus
1/20
HP: 0010460
Abnormality of the female genitalia
1/20
HP: 0010784
Uterine neoplasm
1/20
HP: 0010787
Genital neoplasm
1/20
HP: 0012114
Endometrial carcinoma
1/20
HP: 0012243
Abnormal reproductive system morphology
1/20
HP: 0030012
Abnormal female reproductive system physiology
1/20
HP: 0030126
Abnormality of the endometrium
1/20
HP: 0030127
Endometriosis
1/20
HP: 0031105
Abnormal uterus morphology
1/20
HP: 0040298
Hyperplasia of the endometrium
1/20
ID
Name
Top Correlation
HP: 0000118
Phenotypic abnormality
0/20
HP: 0000119
Abnormality of the genitourinary system
0/20
HP: 0000812
Abnormal internal genitalia
0/20
HP: 0002664
Neoplasm
0/20
HP: 0007379
Neoplasm of the genitourinary tract
0/20
HP: 0011793
Neoplasm by anatomical site
0/20