C67.4

Case	Control
208	459997

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds Ratio
chr5:44095849	rs77370333	-	T>C	19	12837	32.06	1.493e-08	3.481
chr2:173490435	rs34606783	-	C>T	31	27573	30.14	4.021e-08	2.676
chr6:116053949	rs117526298	-	T>C	19	13533	29.04	7.077e-08	3.299
chr18:62284758	rs117474449	-	C>T	18	12868	27.08	1.951e-07	3.266
chr8:25405899	rs118085129	-	G>A	25	21917	25.59	4.214e-07	2.722
chr18:60269141	rs75436454	-	G>A	29	28094	22.87	1.732e-06	2.436
chr16:7609763	rs12598822	RBFOX1	A>G	22	18995	22.5	2.103e-06	2.71
chr3:184476686	rs73187078	-	C>T	20	16695	22.26	2.376e-06	2.814
chr18:36838897	rs117054653	-	G>A	15	10854	22.17	2.494e-06	3.224
chr1:30535269	rs166518	-	G>A	142	229222	22.09	2.596e-06	1.613
chr16:81814339	rs62046431	PLCG2	A>C	27	25954	21.63	3.3e-06	2.447
chr15:60291909	rs78697225	-	T>G	21	18177	21.62	3.319e-06	2.72
chr11:122618352	rs77673582	UBASH3B	T>C	21	18194	21.29	3.943e-06	2.696
chr3:73242081	rs1843619	-	A>C	51	202602	21.18	4.183e-06	0.5098
chr10:125217174	rs11593493	-	G>A	33	34808	21.05	4.482e-06	2.246
chr19:3975930	rs79801074	-	C>T	23	20902	20.97	4.656e-06	2.576
chr3:180401489	rs114690716	CCDC39	A>G	36	39366	20.85	4.955e-06	2.172
chr5:41295125	rs114971417	-	G>A	25	23640	20.83	5.03e-06	2.483
chr3:15996302	rs75113534	-	G>A	16	12274	20.8	5.088e-06	3.021
chr2:33045867	Affx-52336191	TTC27	G>GT	126	200342	20.77	5.165e-06	1.615
chr2:173490435	rs34606783	-	C>T	31	27249	29.22	6.474e-08	2.641
chr6:116053949	rs117526298	-	T>C	19	13267	28.72	8.362e-08	3.282
chr5:44095849	rs77370333	-	T>C	18	12582	27.15	1.881e-07	3.274
chr18:62284758	rs117474449	-	C>T	18	12593	26.86	2.187e-07	3.255
chr8:25405899	rs118085129	-	G>A	25	21643	24.9	6.04e-07	2.691
chr18:60269141	rs75436454	-	G>A	29	27040	23.58	1.196e-06	2.47
chr16:7609763	rs12598822	RBFOX1	A>G	22	18330	22.99	1.63e-06	2.74
chr3:73242081	rs1843619	-	A>C	48	192462	22.63	1.968e-06	0.4893
chr3:184476686	rs73187078	-	C>T	20	16369	21.98	2.755e-06	2.799
chr18:36838897	rs117054653	-	G>A	15	10669	21.81	3.017e-06	3.198
chr1:30535269	rs166518	-	G>A	139	218614	21.72	3.163e-06	1.617
chr11:122618352	rs77673582	UBASH3B	T>C	21	17778	21.16	4.219e-06	2.691
chr3:137427055	rs72983028	-	C>A	19	15480	20.97	4.673e-06	2.801
chr8:139329657	rs7816994	FAM135B	T>C	29	28526	20.61	5.637e-06	2.337
chr10:125217174	rs11593493	-	G>A	33	34230	20.54	5.83e-06	2.228
chr1:191075229	rs77814632	-	G>A	18	14414	20.48	6.024e-06	2.838
chr3:24652348	rs73141188	-	G>A	23	20587	20.45	6.108e-06	2.55
chr19:3975930	rs79801074	-	C>T	23	20604	20.42	6.211e-06	2.549
chr23:145855717	rs147105799	-	G>A	10	7388	20.32	6.55e-06	3.858
chr5:1342714	rs31489	CLPTM1L	C>A	125	375496	20.18	7.054e-06	0.6213

Location

SNP

Gene

Ref>Alt

Alt in Case

Alt in Control

Chi-square

P-value

Odds Ratio

chr5:44095849

rs77370333

-

T>C

19

12837

32.06

1.493e-08

3.481

chr2:173490435

rs34606783

-

C>T

31

27573

30.14

4.021e-08

2.676

chr6:116053949

rs117526298

-

T>C

19

13533

29.04

7.077e-08

3.299

chr18:62284758

rs117474449

-

C>T

18

12868

27.08

1.951e-07

3.266

chr8:25405899

rs118085129

-

G>A

25

21917

25.59

4.214e-07

2.722

chr18:60269141

rs75436454

-

G>A

29

28094

22.87

1.732e-06

2.436

chr16:7609763

rs12598822

RBFOX1

A>G

22

18995

22.5

2.103e-06

2.71

chr3:184476686

rs73187078

-

C>T

20

16695

22.26

2.376e-06

2.814

chr18:36838897

rs117054653

-

G>A

15

10854

22.17

2.494e-06

3.224

chr1:30535269

rs166518

-

G>A

142

229222

22.09

2.596e-06

1.613

chr16:81814339

rs62046431

PLCG2

A>C

27

25954

21.63

3.3e-06

2.447

chr15:60291909

rs78697225

-

T>G

21

18177

21.62

3.319e-06

2.72

chr11:122618352

rs77673582

UBASH3B

T>C

21

18194

21.29

3.943e-06

2.696

chr3:73242081

rs1843619

-

A>C

51

202602

21.18

4.183e-06

0.5098

chr10:125217174

rs11593493

-

G>A

33

34808

21.05

4.482e-06

2.246

chr19:3975930

rs79801074

-

C>T

23

20902

20.97

4.656e-06

2.576

chr3:180401489

rs114690716

CCDC39

A>G

36

39366

20.85

4.955e-06

2.172

chr5:41295125

rs114971417

-

G>A

25

23640

20.83

5.03e-06

2.483

chr3:15996302

rs75113534

-

G>A

16

12274

20.8

5.088e-06

3.021

chr2:33045867

Affx-52336191

TTC27

G>GT

126

200342

20.77

5.165e-06

1.615

chr2:173490435

rs34606783

-

C>T

31

27249

29.22

6.474e-08

2.641

chr6:116053949

rs117526298

-

T>C

19

13267

28.72

8.362e-08

3.282

chr5:44095849

rs77370333

-

T>C

18

12582

27.15

1.881e-07

3.274

chr18:62284758

rs117474449

-

C>T

18

12593

26.86

2.187e-07

3.255

chr8:25405899

rs118085129

-

G>A

25

21643

24.9

6.04e-07

2.691

chr18:60269141

rs75436454

-

G>A

29

27040

23.58

1.196e-06

2.47

chr16:7609763

rs12598822

RBFOX1

A>G

22

18330

22.99

1.63e-06

2.74

chr3:73242081

rs1843619

-

A>C

48

192462

22.63

1.968e-06

0.4893

chr3:184476686

rs73187078

-

C>T

20

16369

21.98

2.755e-06

2.799

chr18:36838897

rs117054653

-

G>A

15

10669

21.81

3.017e-06

3.198

chr1:30535269

rs166518

-

G>A

139

218614

21.72

3.163e-06

1.617

chr11:122618352

rs77673582

UBASH3B

T>C

21

17778

21.16

4.219e-06

2.691

chr3:137427055

rs72983028

-

C>A

19

15480

20.97

4.673e-06

2.801

chr8:139329657

rs7816994

FAM135B

T>C

29

28526

20.61

5.637e-06

2.337

chr10:125217174

rs11593493

-

G>A

33

34230

20.54

5.83e-06

2.228

chr1:191075229

rs77814632

-

G>A

18

14414

20.48

6.024e-06

2.838

chr3:24652348

rs73141188

-

G>A

23

20587

20.45

6.108e-06

2.55

chr19:3975930

rs79801074

-

C>T

23

20604

20.42

6.211e-06

2.549

chr23:145855717

rs147105799

-

G>A

10

7388

20.32

6.55e-06

3.858

chr5:1342714

rs31489

CLPTM1L

C>A

125

375496

20.18

7.054e-06

0.6213

ID	Name	Top Correlation
HP: 0012226	Ovarian teratoma	10/20
HP: 0025274	Ovarian dermoid cyst	20/20

ID	Name	Top Correlation
HP: 0000008	Abnormal morphology of female internal genitalia	0/20
HP: 0000014	Abnormality of the bladder	0/20
HP: 0000015	Bladder diverticulum	0/20
HP: 0000078	Abnormality of the genital system	0/20
HP: 0000079	Abnormality of the urinary system	0/20
HP: 0000118	Phenotypic abnormality	0/20
HP: 0000119	Abnormality of the genitourinary system	0/20
HP: 0000137	Abnormality of the ovary	0/20
HP: 0000138	Ovarian cyst	0/20
HP: 0000142	Abnormal vagina morphology	0/20
HP: 0000812	Abnormal internal genitalia	0/20
HP: 0000951	Abnormality of the skin	0/20
HP: 0001574	Abnormality of the integument	0/20
HP: 0001586	Vesicovaginal fistula	0/20
HP: 0002664	Neoplasm	0/20
HP: 0002898	Embryonal neoplasm	0/20
HP: 0004320	Vaginal fistula	0/20
HP: 0004321	Bladder fistula	0/20
HP: 0007379	Neoplasm of the genitourinary tract	0/20
HP: 0009792	Teratoma	0/20
HP: 0010460	Abnormality of the female genitalia	0/20
HP: 0010785	Gonadal neoplasm	0/20
HP: 0010787	Genital neoplasm	0/20
HP: 0010936	Abnormality of the lower urinary tract	0/20
HP: 0011121	Abnormality of skin morphology	0/20
HP: 0011355	Localized skin lesion	0/20
HP: 0011792	Neoplasm by histology	0/20
HP: 0011793	Neoplasm by anatomical site	0/20
HP: 0012243	Abnormal reproductive system morphology	0/20
HP: 0025245	Cutaneous cyst	0/20
HP: 0025247	Dermoid cyst	0/20
HP: 0025487	Abnormality of bladder morphology	0/20
HP: 0031065	Abnormal ovarian morphology	0/20
HP: 0100589	Urogenital fistula	0/20
HP: 0100615	Ovarian neoplasm	0/20
HP: 0100728	Germ cell neoplasia	0/20

Posterior wall of bladder

C67.4

Case/Control GWAS ^ⓘ

Links

Statistics

Top SNP Information

Associated Phenotypes ^ⓘ

Posterior wall of bladder

C67.4

Case/Control GWAS ⓘ

Links

Statistics

Top SNP Information Show Table

Associated Phenotypes ⓘ Shared SNP phenotypes No shared SNP phenotypes

Case/Control GWAS ^ⓘ

Top SNP Information

Associated Phenotypes ^ⓘ