Case | Control |
---|---|
208 | 459997 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds Ratio |
---|---|---|---|---|---|---|---|---|
chr5:44095849 | rs77370333 | - | T>C | 19 | 12837 | 32.06 | 1.493e-08 | 3.481 |
chr2:173490435 | rs34606783 | - | C>T | 31 | 27573 | 30.14 | 4.021e-08 | 2.676 |
chr6:116053949 | rs117526298 | - | T>C | 19 | 13533 | 29.04 | 7.077e-08 | 3.299 |
chr18:62284758 | rs117474449 | - | C>T | 18 | 12868 | 27.08 | 1.951e-07 | 3.266 |
chr8:25405899 | rs118085129 | - | G>A | 25 | 21917 | 25.59 | 4.214e-07 | 2.722 |
chr18:60269141 | rs75436454 | - | G>A | 29 | 28094 | 22.87 | 1.732e-06 | 2.436 |
chr16:7609763 | rs12598822 | RBFOX1 | A>G | 22 | 18995 | 22.5 | 2.103e-06 | 2.71 |
chr3:184476686 | rs73187078 | - | C>T | 20 | 16695 | 22.26 | 2.376e-06 | 2.814 |
chr18:36838897 | rs117054653 | - | G>A | 15 | 10854 | 22.17 | 2.494e-06 | 3.224 |
chr1:30535269 | rs166518 | - | G>A | 142 | 229222 | 22.09 | 2.596e-06 | 1.613 |
chr16:81814339 | rs62046431 | PLCG2 | A>C | 27 | 25954 | 21.63 | 3.3e-06 | 2.447 |
chr15:60291909 | rs78697225 | - | T>G | 21 | 18177 | 21.62 | 3.319e-06 | 2.72 |
chr11:122618352 | rs77673582 | UBASH3B | T>C | 21 | 18194 | 21.29 | 3.943e-06 | 2.696 |
chr3:73242081 | rs1843619 | - | A>C | 51 | 202602 | 21.18 | 4.183e-06 | 0.5098 |
chr10:125217174 | rs11593493 | - | G>A | 33 | 34808 | 21.05 | 4.482e-06 | 2.246 |
chr19:3975930 | rs79801074 | - | C>T | 23 | 20902 | 20.97 | 4.656e-06 | 2.576 |
chr3:180401489 | rs114690716 | CCDC39 | A>G | 36 | 39366 | 20.85 | 4.955e-06 | 2.172 |
chr5:41295125 | rs114971417 | - | G>A | 25 | 23640 | 20.83 | 5.03e-06 | 2.483 |
chr3:15996302 | rs75113534 | - | G>A | 16 | 12274 | 20.8 | 5.088e-06 | 3.021 |
chr2:33045867 | Affx-52336191 | TTC27 | G>GT | 126 | 200342 | 20.77 | 5.165e-06 | 1.615 |
chr2:173490435 | rs34606783 | - | C>T | 31 | 27249 | 29.22 | 6.474e-08 | 2.641 |
chr6:116053949 | rs117526298 | - | T>C | 19 | 13267 | 28.72 | 8.362e-08 | 3.282 |
chr5:44095849 | rs77370333 | - | T>C | 18 | 12582 | 27.15 | 1.881e-07 | 3.274 |
chr18:62284758 | rs117474449 | - | C>T | 18 | 12593 | 26.86 | 2.187e-07 | 3.255 |
chr8:25405899 | rs118085129 | - | G>A | 25 | 21643 | 24.9 | 6.04e-07 | 2.691 |
chr18:60269141 | rs75436454 | - | G>A | 29 | 27040 | 23.58 | 1.196e-06 | 2.47 |
chr16:7609763 | rs12598822 | RBFOX1 | A>G | 22 | 18330 | 22.99 | 1.63e-06 | 2.74 |
chr3:73242081 | rs1843619 | - | A>C | 48 | 192462 | 22.63 | 1.968e-06 | 0.4893 |
chr3:184476686 | rs73187078 | - | C>T | 20 | 16369 | 21.98 | 2.755e-06 | 2.799 |
chr18:36838897 | rs117054653 | - | G>A | 15 | 10669 | 21.81 | 3.017e-06 | 3.198 |
chr1:30535269 | rs166518 | - | G>A | 139 | 218614 | 21.72 | 3.163e-06 | 1.617 |
chr11:122618352 | rs77673582 | UBASH3B | T>C | 21 | 17778 | 21.16 | 4.219e-06 | 2.691 |
chr3:137427055 | rs72983028 | - | C>A | 19 | 15480 | 20.97 | 4.673e-06 | 2.801 |
chr8:139329657 | rs7816994 | FAM135B | T>C | 29 | 28526 | 20.61 | 5.637e-06 | 2.337 |
chr10:125217174 | rs11593493 | - | G>A | 33 | 34230 | 20.54 | 5.83e-06 | 2.228 |
chr1:191075229 | rs77814632 | - | G>A | 18 | 14414 | 20.48 | 6.024e-06 | 2.838 |
chr3:24652348 | rs73141188 | - | G>A | 23 | 20587 | 20.45 | 6.108e-06 | 2.55 |
chr19:3975930 | rs79801074 | - | C>T | 23 | 20604 | 20.42 | 6.211e-06 | 2.549 |
chr23:145855717 | rs147105799 | - | G>A | 10 | 7388 | 20.32 | 6.55e-06 | 3.858 |
chr5:1342714 | rs31489 | CLPTM1L | C>A | 125 | 375496 | 20.18 | 7.054e-06 | 0.6213 |
ID | Name | Top Correlation |
---|---|---|
HP: 0012226 | Ovarian teratoma | 10/20 |
HP: 0025274 | Ovarian dermoid cyst | 20/20 |