C79.6

Case	Control
152	460053

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds Ratio
chr12:85058073	rs73365478	-	G>T	35	41819	34.87	3.525e-09	2.758
chr5:171483129	rs11134727	STK10	T>C	43	62645	26.59	2.517e-07	2.276
chr7:25108429	rs77933195	-	G>C	22	24307	25.64	4.121e-07	2.909
chr2:161639823	rs115143596	-	G>A	17	16848	24.49	7.488e-07	3.212
chr2:146472243	rs77873558	-	C>T	30	39783	24.41	7.807e-07	2.502
chr19:16391727	rs12977515	-	G>T	43	65220	23.8	1.067e-06	2.182
chr2:38342835	rs2161773	-	G>A	12	10043	23.4	1.319e-06	3.763
chr14:96705747	rs76159059	BDKRB2	C>T	25	30932	22.73	1.866e-06	2.603
chr1:184941196	rs35401135	NIBAN1	C>A	28	36545	22.54	2.054e-06	2.48
chr9:122043556	rs471215	BRINP1	T>C	116	245148	22.31	2.317e-06	1.724
chr3:61698615	rs11709166	PTPRG	G>A	87	169459	21.88	2.908e-06	1.787
chr5:116480810	rs76433515	-	C>T	13	11850	21.76	3.087e-06	3.458
chr4:36640838	rs73239333	-	C>A	25	31607	21.57	3.409e-06	2.544
chr11:24274914	rs78070448	-	C>T	14	13430	21.56	3.434e-06	3.311
chr2:80488280	rs1838254	CTNNA2	A>G	19	21316	21.48	3.574e-06	2.853
chr4:62293603	rs111788530	ADGRL3	G>A	24	29939	21.4	3.733e-06	2.577
chr3:108748255	rs114904754	MORC1	G>C	20	22951	21.25	4.038e-06	2.774
chr4:141163554	rs115754744	-	T>C	15	15077	21.19	4.149e-06	3.169
chr5:119206641	rs73250213	-	A>G	17	18073	21.18	4.184e-06	2.982
chr7:117143718	rs34654194	CFTR	A>G	47	76878	21.13	4.3e-06	2.038
chr12:85058073	rs73365478	-	G>T	35	40394	36.58	1.468e-09	2.828
chr5:171483129	rs11134727	STK10	T>C	43	60112	28.69	8.496e-08	2.353
chr2:161639823	rs115143596	-	G>A	17	15771	27.04	1.989e-07	3.392
chr19:16391727	rs12977515	-	G>T	42	61904	24.27	8.389e-07	2.22
chr4:62257421	rs13149417	ADGRL3	T>C	25	29315	23.74	1.105e-06	2.659
chr12:53817956	rs784894	AMHR2	C>A	4	1550	23.68	1.139e-06	7.887
chr2:38342835	rs2161773	-	G>A	12	9942	23.24	1.43e-06	3.752
chr7:25108429	rs77933195	-	G>C	21	23462	23.19	1.468e-06	2.834
chr7:117143718	rs34654194	CFTR	A>G	47	73966	22.91	1.698e-06	2.102
chr1:184941196	rs35401135	NIBAN1	C>A	28	35895	22.8	1.802e-06	2.497
chr5:119206641	rs73250213	-	A>G	15	14221	22.74	1.852e-06	3.293
chr2:146472243	rs77873558	-	C>T	29	38569	22.7	1.892e-06	2.462
chr5:5269504	rs73735780	ADAMTS16	T>C	48	76212	22.35	2.267e-06	2.07
chr11:24274914	rs78070448	-	C>T	14	13034	22.23	2.417e-06	3.37
chr12:85031781	rs12321692	-	T>C	26	32771	21.96	2.783e-06	2.529
chr1:81514508	rs116182484	-	A>G	19	20949	21.79	3.036e-06	2.878
chr2:80488280	rs1838254	CTNNA2	A>G	19	20908	21.75	3.108e-06	2.875
chr2:8682939	rs1566824	-	C>A	33	46216	21.55	3.439e-06	2.298
chr8:145840377	rs117889339	-	C>T	19	21094	21.15	4.246e-06	2.836
chr6:94587823	rs117506323	-	C>T	39	58644	21.14	4.274e-06	2.159

Location

SNP

Gene

Ref>Alt

Alt in Case

Alt in Control

Chi-square

P-value

Odds Ratio

chr12:85058073

rs73365478

-

G>T

35

41819

34.87

3.525e-09

2.758

chr5:171483129

rs11134727

STK10

T>C

43

62645

26.59

2.517e-07

2.276

chr7:25108429

rs77933195

-

G>C

22

24307

25.64

4.121e-07

2.909

chr2:161639823

rs115143596

-

G>A

17

16848

24.49

7.488e-07

3.212

chr2:146472243

rs77873558

-

C>T

30

39783

24.41

7.807e-07

2.502

chr19:16391727

rs12977515

-

G>T

43

65220

23.8

1.067e-06

2.182

chr2:38342835

rs2161773

-

G>A

12

10043

23.4

1.319e-06

3.763

chr14:96705747

rs76159059

BDKRB2

C>T

25

30932

22.73

1.866e-06

2.603

chr1:184941196

rs35401135

NIBAN1

C>A

28

36545

22.54

2.054e-06

2.48

chr9:122043556

rs471215

BRINP1

T>C

116

245148

22.31

2.317e-06

1.724

chr3:61698615

rs11709166

PTPRG

G>A

87

169459

21.88

2.908e-06

1.787

chr5:116480810

rs76433515

-

C>T

13

11850

21.76

3.087e-06

3.458

chr4:36640838

rs73239333

-

C>A

25

31607

21.57

3.409e-06

2.544

chr11:24274914

rs78070448

-

C>T

14

13430

21.56

3.434e-06

3.311

chr2:80488280

rs1838254

CTNNA2

A>G

19

21316

21.48

3.574e-06

2.853

chr4:62293603

rs111788530

ADGRL3

G>A

24

29939

21.4

3.733e-06

2.577

chr3:108748255

rs114904754

MORC1

G>C

20

22951

21.25

4.038e-06

2.774

chr4:141163554

rs115754744

-

T>C

15

15077

21.19

4.149e-06

3.169

chr5:119206641

rs73250213

-

A>G

17

18073

21.18

4.184e-06

2.982

chr7:117143718

rs34654194

CFTR

A>G

47

76878

21.13

4.3e-06

2.038

chr12:85058073

rs73365478

-

G>T

35

40394

36.58

1.468e-09

2.828

chr5:171483129

rs11134727

STK10

T>C

43

60112

28.69

8.496e-08

2.353

chr2:161639823

rs115143596

-

G>A

17

15771

27.04

1.989e-07

3.392

chr19:16391727

rs12977515

-

G>T

42

61904

24.27

8.389e-07

2.22

chr4:62257421

rs13149417

ADGRL3

T>C

25

29315

23.74

1.105e-06

2.659

chr12:53817956

rs784894

AMHR2

C>A

4

1550

23.68

1.139e-06

7.887

chr2:38342835

rs2161773

-

G>A

12

9942

23.24

1.43e-06

3.752

chr7:25108429

rs77933195

-

G>C

21

23462

23.19

1.468e-06

2.834

chr7:117143718

rs34654194

CFTR

A>G

47

73966

22.91

1.698e-06

2.102

chr1:184941196

rs35401135

NIBAN1

C>A

28

35895

22.8

1.802e-06

2.497

chr5:119206641

rs73250213

-

A>G

15

14221

22.74

1.852e-06

3.293

chr2:146472243

rs77873558

-

C>T

29

38569

22.7

1.892e-06

2.462

chr5:5269504

rs73735780

ADAMTS16

T>C

48

76212

22.35

2.267e-06

2.07

chr11:24274914

rs78070448

-

C>T

14

13034

22.23

2.417e-06

3.37

chr12:85031781

rs12321692

-

T>C

26

32771

21.96

2.783e-06

2.529

chr1:81514508

rs116182484

-

A>G

19

20949

21.79

3.036e-06

2.878

chr2:80488280

rs1838254

CTNNA2

A>G

19

20908

21.75

3.108e-06

2.875

chr2:8682939

rs1566824

-

C>A

33

46216

21.55

3.439e-06

2.298

chr8:145840377

rs117889339

-

C>T

19

21094

21.15

4.246e-06

2.836

chr6:94587823

rs117506323

-

C>T

39

58644

21.14

4.274e-06

2.159

ID	Name	Top Correlation
HP: 0000008	Abnormal morphology of female internal genitalia	0/20
HP: 0000078	Abnormality of the genital system	0/20
HP: 0000118	Phenotypic abnormality	0/20
HP: 0000119	Abnormality of the genitourinary system	0/20
HP: 0000137	Abnormality of the ovary	0/20
HP: 0000142	Abnormal vagina morphology	0/20
HP: 0000765	Abnormality of the thorax	0/20
HP: 0000769	Abnormality of the breast	0/20
HP: 0000812	Abnormal internal genitalia	0/20
HP: 0000924	Abnormality of the skeletal system	0/20
HP: 0002012	Abnormality of the abdominal organs	0/20
HP: 0002242	Abnormal intestine morphology	0/20
HP: 0002250	Abnormal large intestine morphology	0/20
HP: 0002664	Neoplasm	0/20
HP: 0002672	Gastrointestinal carcinoma	0/20
HP: 0006749	Malignant gastrointestinal tract tumors	0/20
HP: 0007378	Neoplasm of the gastrointestinal tract	0/20
HP: 0007379	Neoplasm of the genitourinary tract	0/20
HP: 0009121	Abnormal axial skeleton morphology	0/20
HP: 0010460	Abnormality of the female genitalia	0/20
HP: 0010785	Gonadal neoplasm	0/20
HP: 0010787	Genital neoplasm	0/20
HP: 0011024	Abnormality of the gastrointestinal tract	0/20
HP: 0011793	Neoplasm by anatomical site	0/20
HP: 0011842	Abnormality of skeletal morphology	0/20
HP: 0012243	Abnormal reproductive system morphology	0/20
HP: 0012718	Morphological abnormality of the gastrointestinal tract	0/20
HP: 0025031	Abnormality of the digestive system	0/20
HP: 0025033	Abnormality of digestive system morphology	0/20
HP: 0031093	Abnormal breast morphology	0/20
HP: 0032408	Breast mass	0/20
HP: 0040273	Adenocarcinoma of the intestines	0/20
HP: 0040275	Adenocarcinoma of the large intestine	0/20
HP: 0040276	Adenocarcinoma of the colon	0/20
HP: 0100273	Neoplasm of the colon	0/20
HP: 0100615	Ovarian neoplasm	0/20
HP: 0100650	Vaginal neoplasm	0/20
HP: 0100834	Neoplasm of the large intestine	0/20

Secondary malignant neoplasm of ovary

C79.6

Case/Control GWAS ^ⓘ

Links

Statistics

Top SNP Information

Associated Phenotypes ^ⓘ

Secondary malignant neoplasm of ovary

C79.6

Case/Control GWAS ⓘ

Links

Statistics

Top SNP Information Show Table

Associated Phenotypes ⓘ Shared SNP phenotypes No shared SNP phenotypes

Case/Control GWAS ^ⓘ

Top SNP Information

Associated Phenotypes ^ⓘ