Diseases of the genitourinary system

Chapter14

Case/Control GWAS

GWAS of Chapter14

Statistics

Case Control
123732 336474

Top SNP Information

Associated Phenotypes

ID Name Top Correlation
HP: 0000008 Abnormal morphology of female internal genitalia 6/20
HP: 0000011 Neurogenic bladder 1/20
HP: 0000015 Bladder diverticulum 2/20
HP: 0000016 Urinary retention 5/20
HP: 0000017 Nocturia 4/20
HP: 0000022 Abnormality of male internal genitalia 7/20
HP: 0000024 Prostatitis 2/20
HP: 0000031 Epididymitis 3/20
HP: 0000034 Hydrocele testis 2/20
HP: 0000035 Abnormal testis morphology 1/20
HP: 0000075 Renal duplication 1/20
HP: 0000077 Abnormality of the kidney 3/20
HP: 0000078 Abnormality of the genital system 7/20
HP: 0000079 Abnormality of the urinary system 3/20
HP: 0000080 Abnormality of reproductive system physiology 6/20
HP: 0000119 Abnormality of the genitourinary system 4/20
HP: 0000130 Abnormality of the uterus 3/20
HP: 0000131 Uterine leiomyoma 2/20
HP: 0000132 Menorrhagia 2/20
HP: 0000137 Abnormality of the ovary 8/20
HP: 0000138 Ovarian cyst 5/20
HP: 0000139 Uterine prolapse 11/20
HP: 0000140 Abnormality of the menstrual cycle 2/20
HP: 0000141 Amenorrhea 1/20
HP: 0000142 Abnormal vagina morphology 9/20
HP: 0000143 Rectovaginal fistula 2/20
HP: 0000144 Decreased fertility 2/20
HP: 0000147 Polycystic ovaries 5/20
HP: 0000164 Abnormality of the dentition 2/20
HP: 0000366 Abnormality of the nose 1/20
HP: 0000464 Abnormality of the neck 3/20
HP: 0000479 Abnormal retinal morphology 2/20
HP: 0000502 Abnormal conjunctiva morphology 1/20
HP: 0000600 Abnormality of the pharynx 3/20
HP: 0000621 Entropion 1/20
HP: 0000769 Abnormality of the breast 5/20
HP: 0000789 Infertility 2/20
HP: 0000796 Urethral obstruction 1/20
HP: 0000802 Impotence 1/20
HP: 0000812 Abnormal internal genitalia 6/20
HP: 0000813 Bicornuate uterus 1/20
HP: 0000828 Abnormality of the parathyroid gland 1/20
HP: 0000843 Hyperparathyroidism 1/20
HP: 0000845 Growth hormone excess 1/20
HP: 0000858 Irregular menstruation 2/20
HP: 0000868 Decreased fertility in females 2/20
HP: 0000876 Oligomenorrhea 1/20
HP: 0000952 Jaundice 2/20
HP: 0000998 Hypertrichosis 1/20
HP: 0001007 Hirsutism 1/20
HP: 0001028 Hemangioma 1/20
HP: 0001153 Septate vagina 1/20
HP: 0001194 Abnormalities of placenta or umbilical cord 2/20
HP: 0001197 Abnormality of prenatal development or birth 2/20
HP: 0001288 Gait disturbance 1/20
HP: 0001396 Cholestasis 2/20
HP: 0001438 Abnormality of abdomen morphology 5/20
HP: 0001622 Premature birth 2/20
HP: 0001623 Breech presentation 2/20
HP: 0001627 Abnormal heart morphology 3/20
HP: 0001787 Abnormal delivery 2/20
HP: 0001788 Premature rupture of membranes 1/20
HP: 0001871 Abnormality of blood and blood-forming tissues 6/20
HP: 0001872 Abnormal thrombocyte morphology 2/20
HP: 0001873 Thrombocytopenia 2/20
HP: 0001876 Pancytopenia 2/20
HP: 0001877 Abnormal erythrocyte morphology 2/20
HP: 0001878 Hemolytic anemia 1/20
HP: 0001881 Abnormal leukocyte morphology 4/20
HP: 0001892 Abnormal bleeding 6/20
HP: 0001903 Anemia 2/20
HP: 0001909 Leukemia 2/20
HP: 0001915 Aplastic anemia 2/20
HP: 0001939 Abnormality of metabolism/homeostasis 4/20
HP: 0001941 Acidosis 1/20
HP: 0001943 Hypoglycemia 2/20
HP: 0001945 Fever 2/20
HP: 0001962 Palpitations 1/20
HP: 0001972 Macrocytic anemia 1/20
HP: 0001988 Recurrent hypoglycemia 1/20
HP: 0002035 Rectal prolapse 1/20
HP: 0002063 Rigidity 1/20
HP: 0002585 Abnormality of the peritoneum 3/20
HP: 0002686 Prenatal maternal abnormality 2/20
HP: 0002716 Lymphadenopathy 4/20
HP: 0002733 Abnormality of the lymph nodes 2/20
HP: 0002763 Abnormal cartilage morphology 2/20
HP: 0002859 Rhabdomyosarcoma 6/20
HP: 0002960 Autoimmunity 2/20
HP: 0002977 Aplasia/Hypoplasia involving the central nervous system 4/20
HP: 0003002 Breast carcinoma 4/20
HP: 0003110 Abnormality of urine homeostasis 2/20
HP: 0003112 Abnormality of serum amino acid level 2/20
HP: 0003117 Abnormal circulating hormone level 1/20
HP: 0003148 Elevated serum acid phosphatase 1/20
HP: 0003158 Hyposthenuria 2/20
HP: 0003201 Rhabdomyolysis 2/20
HP: 0003249 Genital ulcers 1/20
HP: 0003418 Back pain 2/20
HP: 0003613 Antiphospholipid antibody positivity 1/20
HP: 0003762 Uterus didelphys 1/20
HP: 0004320 Vaginal fistula 2/20
HP: 0004334 Dermal atrophy 1/20
HP: 0004337 Abnormality of amino acid metabolism 2/20
HP: 0004348 Abnormality of bone mineral density 2/20
HP: 0004349 Reduced bone mineral density 1/20
HP: 0004354 Abnormal circulating carboxylic acid concentration 2/20
HP: 0004356 Abnormality of lysosomal metabolism 1/20
HP: 0004360 Abnormality of acid-base homeostasis 2/20
HP: 0004364 Abnormal circulating nitrogen compound concentration 3/20
HP: 0004370 Abnormality of temperature regulation 2/20
HP: 0004375 Neoplasm of the nervous system 1/20
HP: 0004377 Hematological neoplasm 3/20
HP: 0004431 Complement deficiency 2/20
HP: 0005268 Spontaneous abortion 1/20
HP: 0005339 Abnormality of complement system 2/20
HP: 0005421 Decreased serum complement C3 2/20
HP: 0005561 Abnormality of bone marrow cell morphology 2/20
HP: 0005584 Renal cell carcinoma 1/20
HP: 0005678 Anterior atlanto-occipital dislocation 1/20
HP: 0005943 Respiratory arrest 2/20
HP: 0006482 Abnormality of dental morphology 2/20
HP: 0006543 Cardiorespiratory arrest 2/20
HP: 0006735 Renal cortical adenoma 1/20
HP: 0006743 Embryonal rhabdomyosarcoma 6/20
HP: 0006766 Papillary renal cell carcinoma 1/20
HP: 0006772 Renal angiomyolipoma 1/20
HP: 0007033 Cerebellar dysplasia 1/20
HP: 0007379 Neoplasm of the genitourinary tract 3/20
HP: 0007962 Speckled corneal dystrophy 1/20
HP: 0008047 Abnormality of the vasculature of the eye 2/20
HP: 0008065 Aplasia/Hypoplasia of the skin 1/20
HP: 0008069 Neoplasm of the skin 2/20
HP: 0008222 Female infertility 2/20
HP: 0008226 Androgen insufficiency 1/20
HP: 0008373 Puberty and gonadal disorders 2/20
HP: 0008677 Congenital nephrotic syndrome 1/20
HP: 0008684 Aplasia/hypoplasia of the uterus 2/20
HP: 0008691 Solitary bladder diverticulum 3/20
HP: 0008696 Renal hamartoma 1/20
HP: 0008711 Benign prostatic hyperplasia 7/20
HP: 0008734 Decreased testicular size 1/20
HP: 0008740 Longitudinal vaginal septum 1/20
HP: 0008775 Abnormal prostate morphology 6/20
HP: 0009124 Abnormal adipose tissue morphology 1/20
HP: 0009714 Abnormality of the epididymis 5/20
HP: 0009726 Renal neoplasm 1/20
HP: 0009728 Neoplasm of striated muscle 7/20
HP: 0010313 Breast hypertrophy 1/20
HP: 0010460 Abnormality of the female genitalia 10/20
HP: 0010461 Abnormality of the male genitalia 2/20
HP: 0010514 Hyperpituitarism 1/20
HP: 0010614 Fibroma 4/20
HP: 0010619 Fibroadenoma of the breast 1/20
HP: 0010625 Anterior pituitary dysgenesis 1/20
HP: 0010784 Uterine neoplasm 2/20
HP: 0010786 Urinary tract neoplasm 1/20
HP: 0010787 Genital neoplasm 2/20
HP: 0010881 Abnormality of the umbilical cord 2/20
HP: 0010935 Abnormality of the upper urinary tract 3/20
HP: 0010972 Anemia of inadequate production 2/20
HP: 0010987 Abnormal cellular immune system morphology 4/20
HP: 0011015 Abnormal blood glucose concentration 1/20
HP: 0011025 Abnormal cardiovascular system physiology 1/20
HP: 0011061 Abnormality of dental structure 2/20
HP: 0011110 Tonsillitis 1/20
HP: 0011134 Low-grade fever 4/20
HP: 0011277 Abnormality of the urinary system physiology 3/20
HP: 0011410 Caesarian section 2/20
HP: 0011413 Shoulder dystocia 1/20
HP: 0011419 Placental abruption 1/20
HP: 0011444 Decorticate rigidity 1/20
HP: 0011767 Abnormality of the parathyroid physiology 1/20
HP: 0011792 Neoplasm by histology 5/20
HP: 0011804 Abnormal muscle physiology 5/20
HP: 0011849 Abnormal bone ossification 3/20
HP: 0011854 Hemoperitoneum 2/20
HP: 0011873 Abnormal platelet count 2/20
HP: 0011890 Prolonged bleeding following procedure 2/20
HP: 0011893 Abnormal leukocyte count 3/20
HP: 0011895 Anemia due to reduced life span of red cells 1/20
HP: 0012031 Lipomatous tumor 1/20
HP: 0012114 Endometrial carcinoma 10/20
HP: 0012130 Abnormal erythroid lineage cell morphology 2/20
HP: 0012145 Abnormality of multiple cell lineages in the bone marrow 2/20
HP: 0012211 Abnormal renal physiology 3/20
HP: 0012243 Abnormal reproductive system morphology 7/20
HP: 0012316 Fibrous tissue neoplasm 6/20
HP: 0012337 Abnormal homeostasis 2/20
HP: 0012581 Solitary renal cyst 1/20
HP: 0012591 Abnormal urinary electrolyte concentration 3/20
HP: 0012787 Recurrent pyelonephritis 1/20
HP: 0012871 Varicocele 2/20
HP: 0012874 Abnormal male reproductive system physiology 5/20
HP: 0012875 Abnormal ejaculation 5/20
HP: 0012876 Premature ejaculation 1/20
HP: 0012877 Retrograde ejaculation 5/20
HP: 0012886 Hemorrhagic ovarian cyst 2/20
HP: 0012888 Abnormality of the uterine cervix 6/20
HP: 0012889 Cervical endometriosis 9/20
HP: 0012905 Euryblepharon 1/20
HP: 0020047 Abnormal myeloid cell morphology 2/20
HP: 0020085 Infection following live vaccination 1/20
HP: 0020126 Prostate mass 1/20
HP: 0025059 Splenic abscess 1/20
HP: 0025143 Chills 2/20
HP: 0025144 Shivering 1/20
HP: 0025145 Rigors 1/20
HP: 0025197 Inclusion body fibromatosis 5/20
HP: 0025328 Antepartum hemorrhage 2/20
HP: 0025337 Red eye 1/20
HP: 0025343 Lupus anticoagulant 2/20
HP: 0025439 Pharyngitis 1/20
HP: 0025461 Abnormal cell morphology 2/20
HP: 0025533 Peau d'orange 1/20
HP: 0025608 Cicatricial ectropion 1/20
HP: 0025636 Endometritis 1/20
HP: 0030012 Abnormal female reproductive system physiology 10/20
HP: 0030014 Female sexual dysfunction 4/20
HP: 0030016 Dyspareunia 5/20
HP: 0030075 Ductal carcinoma in situ 5/20
HP: 0030076 Lobular carcinoma in situ 4/20
HP: 0030087 Abnormal serum testosterone level 1/20
HP: 0030126 Abnormality of the endometrium 11/20
HP: 0030127 Endometriosis 10/20
HP: 0030150 Plasmacytosis 1/20
HP: 0030158 Cervical ectropion 7/20
HP: 0030159 Cervical polyp 8/20
HP: 0030160 Cervicitis 5/20
HP: 0030347 Abnormal circulating androgen level 1/20
HP: 0030349 Decreased circulating androgen level 1/20
HP: 0030416 Vulvar neoplasm 1/20
HP: 0030420 Vulvar adenocarcinoma 2/20
HP: 0030424 Epididymal cyst 3/20
HP: 0030448 Soft tissue sarcoma 2/20
HP: 0030917 Low APGAR score 2/20
HP: 0030919 Low 5-minute APGAR score 1/20
HP: 0030972 Abnormal systemic blood pressure 3/20
HP: 0031018 Eccrine syringofibroadenoma 6/20
HP: 0031065 Abnormal ovarian morphology 6/20
HP: 0031093 Abnormal breast morphology 5/20
HP: 0031094 Abnormal breast physiology 1/20
HP: 0031105 Abnormal uterus morphology 3/20
HP: 0031106 T-shaped uterus 1/20
HP: 0031259 Oophoritis 1/20
HP: 0031456 Ectopic pregnancy 2/20
HP: 0031468 Separation insecurity 1/20
HP: 0031500 Abdominal mass 2/20
HP: 0031607 Pelvic organ prolapse 3/20
HP: 0031826 Abnormal reflex 1/20
HP: 0031879 Abnormal eyelid physiology 1/20
HP: 0031880 Eyelid laxity 1/20
HP: 0032040 Abnormal ocular adnexa physiology 1/20
HP: 0032131 Cervical dysplasia 1/20
HP: 0032180 Abnormal circulating metabolite concentration 3/20
HP: 0032241 Cervical neoplasm 2/20
HP: 0032242 Cervical intraepithelial neoplasia 1/20
HP: 0032245 Abnormal metabolism 2/20
HP: 0032251 Abnormal immune system morphology 1/20
HP: 0032263 Increased blood pressure 3/20
HP: 0032367 Abnormal growth hormone level 1/20
HP: 0032408 Breast mass 6/20
HP: 0032465 Bladder trabeculation 1/20
HP: 0040171 Decreased serum testosterone level 1/20
HP: 0040298 Hyperplasia of the endometrium 10/20
HP: 0041047 Bladder outlet obstruction 5/20
HP: 0045014 Hypolipidemia 1/20
HP: 0100013 Neoplasm of the breast 6/20
HP: 0100242 Sarcoma 2/20
HP: 0100529 Abnormal blood phosphate concentration 1/20
HP: 0100590 Rectal fistula 1/20
HP: 0100607 Dysmenorrhea 2/20
HP: 0100608 Metrorrhagia 10/20
HP: 0100615 Ovarian neoplasm 4/20
HP: 0100645 Cystocele 2/20
HP: 0100650 Vaginal neoplasm 1/20
HP: 0100672 Vaginal hernia 3/20
HP: 0100673 Vaginal hydrocele 1/20
HP: 0100718 Uterine rupture 1/20
HP: 0100742 Vascular neoplasm 1/20
HP: 0100763 Abnormality of the lymphatic system 5/20
HP: 0100813 Testicular torsion 1/20
HP: 0100817 Renovascular hypertension 3/20
HP: 0100822 Rectocele 3/20
HP: 0100823 Genital hernia 10/20
HP: 0100878 Enlarged uterus 10/20
HP: 0200013 Neoplasm of fatty tissue 1/20
HP: 0200023 Priapism 2/20
HP: 0400007 Polymenorrhea 3/20
HP: 0400008 Menometrorrhagia 10/20
HP: 0410287 Intrathoracic hemangioma 3/20