Case | Control |
---|---|
141 | 460064 |
Location | SNP | Gene | Ref>Alt | Alt in Case | Alt in Control | Chi-square | P-value | Odds Ratio |
---|---|---|---|---|---|---|---|---|
chr6:32602430 | rs17211510 | HLA-DQA1 | C>A | 16 | 228013 | 50.52 | 1.179e-12 | 0.1941 |
chr6:32600057 | rs35242582 | HLA-DQA1 | A>G | 17 | 232453 | 50.45 | 1.224e-12 | 0.2019 |
chr6:32625869 | Affx-28496566 | - | C>T | 53 | 367915 | 44.72 | 2.273e-11 | 0.3739 |
chr6:32634838 | rs9274552 | HLA-DQB1 | C>A | 57 | 379289 | 43.31 | 4.671e-11 | 0.3903 |
chr6:32620399 | rs17843606 | - | T>G | 57 | 375828 | 42.66 | 6.504e-11 | 0.3929 |
chr6:32626249 | rs6928482 | - | T>C | 187 | 450282 | 42.54 | 6.939e-11 | 2.204 |
chr6:32623430 | rs9273339 | - | A>G | 60 | 385782 | 41.57 | 1.136e-10 | 0.4044 |
chr6:32635809 | rs3828790 | HLA-DQB1 | C>T | 58 | 376163 | 41.23 | 1.356e-10 | 0.4013 |
chr6:32620775 | rs17843619 | - | A>C | 60 | 384244 | 41.22 | 1.359e-10 | 0.4059 |
chr6:32612488 | rs9273088 | HLA-DQA1 | C>A | 60 | 384084 | 41.17 | 1.393e-10 | 0.4061 |
chr6:32627714 | rs1063355 | HLA-DQB1 | G>T | 60 | 385437 | 41.07 | 1.469e-10 | 0.4065 |
chr6:32615458 | rs17612576 | - | A>G | 60 | 383437 | 40.85 | 1.641e-10 | 0.4074 |
chr6:32637016 | rs9274697 | - | A>G | 190 | 466669 | 40.6 | 1.873e-10 | 2.189 |
chr6:32613712 | rs9273215 | HLA-DQA1 | A>G | 60 | 385432 | 40.2 | 2.289e-10 | 0.4099 |
chr6:32657543 | rs4642516 | - | G>T | 190 | 467653 | 39.1 | 4.017e-10 | 2.148 |
chr6:32612430 | Affx-37072023 | HLA-DQA1 | C>T | 68 | 404759 | 37.57 | 8.823e-10 | 0.4371 |
chr6:32658429 | rs9368737 | - | T>C | 151 | 348169 | 36.35 | 1.653e-09 | 2.013 |
chr6:32677152 | rs16898264 | - | G>A | 146 | 341919 | 35.02 | 3.266e-09 | 2.002 |
chr6:32546696 | rs3208409 | HLA-DRB1 | G>A | 145 | 332887 | 34.66 | 3.922e-09 | 1.98 |
chr6:32546557 | rs34839759 | HLA-DRB1 | C>G | 145 | 331451 | 34.64 | 3.965e-09 | 1.98 |
ID | Name | Top Correlation |
---|---|---|
HP: 0030416 | Vulvar neoplasm | 13/20 |
HP: 0030417 | Squamous cell carcinoma of the vulva | 10/20 |
HP: 0032202 | Vulvar intraepithelial neoplasia | 13/20 |
HP: 0410272 | Vulvar hemangioma | 6/20 |