D10.3

Case	Control
248	459957

Case

Control

248

459957

Top SNP Information

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds Ratio
chr10:131650858	rs117228584	EBF3	C>A	33	26352	26.21	3.055e-07	2.439
chr10:134927874	rs61862113	ADGRA1	G>A	30	23480	25.2	5.157e-07	2.492
chr21:43911349	rs117696967	RSPH1	G>A	23	16026	24.82	6.283e-07	2.77
chr2:109521000	rs115528484	EDAR	G>A	29	22706	24.05	9.379e-07	2.475
chr12:133223685	rs36118826	POLE	A>C	97	114801	23.66	1.149e-06	1.718
chr4:137382244	rs17048685	-	T>G	143	187691	23.16	1.489e-06	1.599
chr13:112197638	rs72657798	-	C>T	20	13510	22.85	1.75e-06	2.838
chr18:41008965	rs79458531	-	G>A	38	33637	22.85	1.75e-06	2.196
chr12:4443502	rs4026707	AC008012.1	T>C	309	480378	22.84	1.756e-06	1.531
chr3:60721499	rs116674064	FHIT	C>T	16	9767	22.71	1.883e-06	3.15
chr10:114219281	rs11195967	VTI1A	G>A	94	111916	22.66	1.933e-06	1.71
chr18:41141292	rs77237612	-	G>A	37	32953	22.41	2.2e-06	2.198
chr3:40242849	rs114196361	MYRIP	A>G	53	53731	22.16	2.503e-06	1.955
chr4:124974480	rs79163102	-	T>C	16	9946	21.73	3.145e-06	3.078
chr3:13674275	rs112360411	FBLN2	G>A	18	11992	21.24	4.053e-06	2.876
chr20:11941963	rs12480821	-	G>A	18	11982	21.15	4.25e-06	2.87
chr12:78476527	rs117937827	NAV3	A>G	30	25118	21.12	4.316e-06	2.316
chr10:99709684	rs34833894	CRTAC1	G>A	55	57133	21.01	4.574e-06	1.902
chr6:84221565	rs75868974	-	C>T	22	16268	20.69	5.412e-06	2.601
chr11:45027107	rs72905104	-	C>T	18	12232	20.67	5.466e-06	2.841

Associated Phenotypes ^ⓘ

ID	Name	Top Correlation
HP: 0009715	Papillary cystadenoma of the epididymis	1/20
HP: 0011798	Renal oncocytoma	1/20
HP: 0012645	Enlarged peripheral nerve	1/20
HP: 0030421	Epididymal neoplasm	1/20
HP: 0030429	Juvenile nasopharyngeal angiofibroma	1/20
HP: 0030434	Pilomatrixoma	1/20

Name

Top Correlation

HP: 0009715

Papillary cystadenoma of the epididymis

1/20

HP: 0011798

Renal oncocytoma

1/20

HP: 0012645

Enlarged peripheral nerve

1/20

HP: 0030421

Epididymal neoplasm

1/20

HP: 0030429

Juvenile nasopharyngeal angiofibroma

1/20

HP: 0030434

Pilomatrixoma

1/20

ID	Name	Top Correlation
HP: 0000022	Abnormality of male internal genitalia	0/20
HP: 0000077	Abnormality of the kidney	0/20
HP: 0000078	Abnormality of the genital system	0/20
HP: 0000079	Abnormality of the urinary system	0/20
HP: 0000118	Phenotypic abnormality	0/20
HP: 0000119	Abnormality of the genitourinary system	0/20
HP: 0000707	Abnormality of the nervous system	0/20
HP: 0000759	Abnormal peripheral nervous system morphology	0/20
HP: 0000812	Abnormal internal genitalia	0/20
HP: 0000951	Abnormality of the skin	0/20
HP: 0001574	Abnormality of the integument	0/20
HP: 0002664	Neoplasm	0/20
HP: 0003549	Abnormality of connective tissue	0/20
HP: 0006772	Renal angiomyolipoma	0/20
HP: 0007379	Neoplasm of the genitourinary tract	0/20
HP: 0008069	Neoplasm of the skin	0/20
HP: 0008696	Renal hamartoma	0/20
HP: 0009124	Abnormal adipose tissue morphology	0/20
HP: 0009714	Abnormality of the epididymis	0/20
HP: 0009726	Renal neoplasm	0/20
HP: 0010461	Abnormality of the male genitalia	0/20
HP: 0010566	Hamartoma	0/20
HP: 0010785	Gonadal neoplasm	0/20
HP: 0010786	Urinary tract neoplasm	0/20
HP: 0010787	Genital neoplasm	0/20
HP: 0010935	Abnormality of the upper urinary tract	0/20
HP: 0011138	Abnormality of skin adnexa morphology	0/20
HP: 0011792	Neoplasm by histology	0/20
HP: 0011793	Neoplasm by anatomical site	0/20
HP: 0012031	Lipomatous tumor	0/20
HP: 0012032	Lipoma	0/20
HP: 0012243	Abnormal reproductive system morphology	0/20
HP: 0012288	Neoplasm of head and neck	0/20
HP: 0012639	Abnormal nervous system morphology	0/20
HP: 0012842	Skin appendage neoplasm	0/20
HP: 0045010	Abnormality of peripheral nerves	0/20
HP: 0200013	Neoplasm of fatty tissue	0/20

Name

Top Correlation

HP: 0000022

Abnormality of male internal genitalia

0/20

HP: 0000077

Abnormality of the kidney

0/20

HP: 0000078

Abnormality of the genital system

0/20

HP: 0000079