D16.4

Case	Control
93	460113

Case

Control

460113

Top SNP Information

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds Ratio
chr8:12885686	rs498216	TRMT9B	C>T	17	23113	32.48	1.204e-08	3.828
chr2:147173817	rs34134633	-	T>A	28	51431	31.05	2.509e-08	2.954
chr2:224569811	rs16865135	-	G>A	11	11858	30.52	3.298e-08	4.728
chr21:36597454	rs78464335	RUNX1	C>T	10	10107	30.32	3.663e-08	4.995
chr9:10718437	rs112448336	-	C>A	21	35206	27.25	1.79e-07	3.131
chr3:182227238	rs7340611	-	A>G	13	17228	25.84	3.716e-07	3.869
chr21:44191487	rs13051772	PDE9A	G>T	16	23860	25.77	3.838e-07	3.463
chr16:88321213	rs7184400	-	A>G	11	13198	25.68	4.033e-07	4.236
chr12:10077685	rs34241398	CLEC2A	C>A	35	77061	25.66	4.079e-07	2.489
chr12:10025401	rs12819071	-	G>A	29	58467	25.61	4.171e-07	2.659
chr9:80187960	rs17063760	GNA14	T>C	14	19960	24.44	7.668e-07	3.601
chr12:78463405	rs73350627	NAV3	C>A	11	13752	24.37	7.964e-07	4.105
chr2:36020590	rs113914737	-	C>T	17	27102	24.24	8.485e-07	3.252
chr2:160155429	rs78277920	-	T>C	21	37405	24.09	9.211e-07	2.942
chr9:10497345	rs1555483	PTPRD	A>G	68	195899	24.03	9.495e-07	2.047
chr2:35882633	rs1401222	-	G>T	16	24821	23.98	9.722e-07	3.33
chr2:35926920	rs112472097	-	A>C	17	27543	23.84	1.049e-06	3.226
chr11:118962804	rs28990987	HMBS	A>G	9	10028	23.65	1.153e-06	4.534
chr10:94850801	rs1339823	-	G>A	10	11912	23.64	1.16e-06	4.256
chr20:30651031	rs58814478	HCK	G>A	10	12184	22.77	1.824e-06	4.158

Associated Phenotypes ^ⓘ

ID	Name	Top Correlation
HP: 0009715	Papillary cystadenoma of the epididymis	1/20
HP: 0030421	Epididymal neoplasm	1/20

Name

Top Correlation

HP: 0009715

Papillary cystadenoma of the epididymis

1/20

HP: 0030421

Epididymal neoplasm

1/20

ID	Name	Top Correlation
HP: 0000022	Abnormality of male internal genitalia	0/20
HP: 0000077	Abnormality of the kidney	0/20
HP: 0000078	Abnormality of the genital system	0/20
HP: 0000079	Abnormality of the urinary system	0/20
HP: 0000118	Phenotypic abnormality	0/20
HP: 0000119	Abnormality of the genitourinary system	0/20
HP: 0000707	Abnormality of the nervous system	0/20
HP: 0000759	Abnormal peripheral nervous system morphology	0/20
HP: 0000812	Abnormal internal genitalia	0/20
HP: 0000951	Abnormality of the skin	0/20
HP: 0001574	Abnormality of the integument	0/20
HP: 0002664	Neoplasm	0/20
HP: 0003549	Abnormality of connective tissue	0/20
HP: 0006772	Renal angiomyolipoma	0/20
HP: 0007379	Neoplasm of the genitourinary tract	0/20
HP: 0008069	Neoplasm of the skin	0/20
HP: 0008696	Renal hamartoma	0/20
HP: 0009124	Abnormal adipose tissue morphology	0/20
HP: 0009714	Abnormality of the epididymis	0/20
HP: 0009726	Renal neoplasm	0/20
HP: 0010461	Abnormality of the male genitalia	0/20
HP: 0010566	Hamartoma	0/20
HP: 0010785	Gonadal neoplasm	0/20
HP: 0010786	Urinary tract neoplasm	0/20
HP: 0010787	Genital neoplasm	0/20
HP: 0010935	Abnormality of the upper urinary tract	0/20
HP: 0011138	Abnormality of skin adnexa morphology	0/20
HP: 0011792	Neoplasm by histology	0/20
HP: 0011793	Neoplasm by anatomical site	0/20
HP: 0011798	Renal oncocytoma	0/20
HP: 0012031	Lipomatous tumor	0/20
HP: 0012032	Lipoma	0/20
HP: 0012243	Abnormal reproductive system morphology	0/20
HP: 0012288	Neoplasm of head and neck	0/20
HP: 0012639	Abnormal nervous system morphology	0/20
HP: 0012645	Enlarged peripheral nerve	0/20
HP: 0012842	Skin appendage neoplasm	0/20
HP: 0030429	Juvenile nasopharyngeal angiofibroma	0/20
HP: 0030434	Pilomatrixoma	0/20
HP: 0045010	Abnormality of peripheral nerves	0/20
HP: 0200013	Neoplasm of fatty tissue	0/20

Name

Top Correlation

HP: 0000022

Abnormality of male internal genitalia

0/20

HP: 0000077

Abnormality of the kidney

0/20

HP: 0000078

Abnormality of the genital system

0/20

HP: 0000079