G55.3

Case	Control
362	459843

Case

Control

362

459843

Top SNP Information

Location	SNP	Gene	Ref>Alt	Alt in Case	Alt in Control	Chi-square	P-value	Odds Ratio
chr2:53057019	rs1376560	-	A>C	178	158213	28.71	8.416e-08	1.577
chr10:132173444	rs10764950	-	A>G	169	150665	27.81	1.339e-07	1.579
chr14:30591931	rs72662250	PRKD1	T>A	29	15007	25.93	3.544e-07	2.538
chr9:81633695	rs11137998	-	T>C	216	207368	22.86	1.746e-06	1.466
chr5:80950123	rs34811278	SSBP2	A>G	37	22319	22.47	2.13e-06	2.181
chr5:140773738	rs115102808	PCDHGA1	C>T	25	13021	21.95	2.796e-06	2.511
chr5:154259962	rs56340489	-	C>T	34	20017	21.68	3.217e-06	2.218
chr10:11481869	rs80090007	-	T>C	41	26191	21.39	3.741e-06	2.069
chr5:177814394	rs111933187	COL23A1	G>A	69	52114	20.85	4.959e-06	1.767
chr2:73183997	rs17008519	SFXN5	T>C	28	15746	20.54	5.838e-06	2.335
chr12:39386498	rs116909769	-	C>G	51	35474	20.42	6.206e-06	1.905
chr2:223480973	rs76427474	FARSB	A>G	40	25886	20.12	7.276e-06	2.042
chr14:74076116	rs1476721	-	T>C	87	70398	20.1	7.354e-06	1.658
chr4:24355449	rs61793498	-	C>T	29	16709	19.92	8.079e-06	2.276
chr9:23568789	rs116948371	-	G>A	66	50029	19.71	9.025e-06	1.759
chr2:223389692	rs111981491	SGPP2	C>T	33	20020	19.68	9.141e-06	2.162
chr2:174284450	rs116799878	-	C>T	26	14681	19.27	1.133e-05	2.342
chr18:24617027	rs55889158	CHST9	C>T	85	69308	19.09	1.247e-05	1.645
chr21:32754880	rs536419	TIAM1	T>C	348	371607	18.92	1.363e-05	1.371
chr15:60644680	rs116367881	ANXA2	G>A	25	13834	18.86	1.407e-05	2.357

Associated Phenotypes ^ⓘ

Name

Top Correlation

ID	Name	Top Correlation
HP: 0000118	Phenotypic abnormality	0/20
HP: 0000152	Abnormality of head or neck	0/20
HP: 0000234	Abnormality of the head	0/20
HP: 0000271	Abnormality of the face	0/20
HP: 0000366	Abnormality of the nose	0/20
HP: 0000478	Abnormality of the eye	0/20
HP: 0000504	Abnormality of vision	0/20
HP: 0000505	Visual impairment	0/20
HP: 0000600	Abnormality of the pharynx	0/20
HP: 0000858	Irregular menstruation	0/20
HP: 0000924	Abnormality of the skeletal system	0/20
HP: 0000925	Abnormality of the vertebral column	0/20
HP: 0001367	Abnormal joint morphology	0/20
HP: 0001626	Abnormality of the cardiovascular system	0/20
HP: 0001739	Abnormality of the nasopharynx	0/20
HP: 0002012	Abnormality of the abdominal organs	0/20
HP: 0002086	Abnormality of the respiratory system	0/20
HP: 0002088	Abnormal lung morphology	0/20
HP: 0002205	Recurrent respiratory infections	0/20
HP: 0002597	Abnormality of the vasculature	0/20
HP: 0002607	Bowel incontinence	0/20
HP: 0002715	Abnormality of the immune system	0/20
HP: 0002719	Recurrent infections	0/20
HP: 0002788	Recurrent upper respiratory tract infections	0/20
HP: 0003307	Hyperlordosis	0/20
HP: 0003418	Back pain	0/20
HP: 0003419	Low back pain	0/20
HP: 0008373	Puberty and gonadal disorders	0/20
HP: 0009121	Abnormal axial skeleton morphology	0/20
HP: 0010674	Abnormality of the curvature of the vertebral column	0/20
HP: 0010885	Avascular necrosis	0/20
HP: 0010978	Abnormality of immune system physiology	0/20
HP: 0011110	Tonsillitis	0/20
HP: 0011842	Abnormality of skeletal morphology	0/20
HP: 0011843	Abnormality of skeletal physiology	0/20
HP: 0011868	Sciatica	0/20
HP: 0011947	Respiratory tract infection	0/20
HP: 0012252	Abnormal respiratory system morphology	0/20
HP: 0012373	Abnormal eye physiology	0/20
HP: 0012531	Pain	0/20
HP: 0012700	Abnormal large intestine physiology	0/20
HP: 0025031	Abnormality of the digestive system	0/20
HP: 0025032	Abnormality of digestive system physiology	0/20
HP: 0025142	Constitutional symptom	0/20
HP: 0025439	Pharyngitis	0/20
HP: 0031058	Impairment of activities of daily living	0/20
HP: 0031064	Impaired continence	0/20
HP: 0032101	Unusual infection	0/20
HP: 0040188	Osteochondrosis	0/20
HP: 0100323	Juvenile aseptic necrosis	0/20
HP: 0100607	Dysmenorrhea	0/20
HP: 0100704	Cerebral visual impairment	0/20
HP: 0100763	Abnormality of the lymphatic system	0/20
HP: 0100765	Abnormality of the tonsils	0/20

Name

Top Correlation

HP: 0000118

Phenotypic abnormality

0/20

HP: 0000152

Abnormality of head or neck

0/20

HP: 0000234

Abnormality of the head

0/20

HP: 0000271